Chelonia mydas (green sea turtle): 102942950
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Entry
102942950 CDS
T02989
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102942950 (EXOSC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102942950 (EXOSC4)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102942950 (EXOSC4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
102942950 (EXOSC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102942950
NCBI-ProteinID:
XP_037747704
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Position
2:1732999..1736060
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AA seq
245 aa
AA seq
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MAGLELLSDEGYRVDGRRAGELRKVRARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSKALHDRALVNCQYSMATFSTGERKRRPHGDRKSSEMTLHLKQTFEAAILTQLYPRSQ
IDIYVQILQADGGNYCACVNAATLATIDAGIPMRDYVCASSAGFIEDTPLADLNYVEEAA
GGPQVALALLPKSDQIALLEMNSRLHEDHLEQVIEAASKACKDVYAVLDQVVRDHVHEVT
TLLGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctggagctgctgtcggacgagggttaccgcgtggacgggcgccgggccggg
gagctgcgcaaggtgcgcgcccgcatgggggtgttcgcgcaggccgacggctccgcctac
ctcgagcagggcaacaccaaggcgctggccgtggtgtacgggccgcacgagatgcgtggc
tcccgcagtaaggccctgcatgaccgggcactggtgaactgtcagtacagcatggctacc
ttcagcacaggggagcgcaagcgccggccccacggtgaccgcaagtccagtgagatgacg
ctgcacctcaagcagaccttcgaagcagcgatcctcacccagctatacccccgctcccag
atcgacatctacgtgcagatcctgcaggcagacggtgggaattactgtgcctgcgtgaat
gcagccacgctggccaccatcgacgcaggcatccccatgcgagactacgtgtgcgccagc
tctgccggcttcatcgaggacacgccgctggccgacctcaactatgtggaggaggcagcc
ggcgggccccaggtagccctcgctctgctgcccaagtcggaccagattgccctgctggag
atgaactcgcggctgcacgaggaccacctggagcaggtcattgaggctgccagcaaggcc
tgcaaggacgtgtacgccgtgctggaccaggtggtgcgtgaccacgtgcacgaggtcacc
acgctgctgggggagtga
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