Chelonia mydas (green sea turtle): 102943226
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Entry
102943226 CDS
T02989
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102943226 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmy03009
]
102943226 (REXO1)
Ribosome biogenesis [BR:
cmy03009
]
Eukaryotic type
Pre-60S particles
RNases
102943226 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
TIL_2
Motif
Other DBs
NCBI-GeneID:
102943226
NCBI-ProteinID:
XP_037742025
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Position
25:complement(4887517..4962223)
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AA seq
1233 aa
AA seq
DB search
MLRPSGYFRGIDCPFLGAGGRGAGGPPCRRPHCHFRHPPAARGAAAPEPGAKPGAELGYD
PYNPELPKPSTQIANGALGDIAVSTPSILQLELVNKAIEEVRYEVEREQKKYEELLETTK
EYSTSEASSLISKTSVSAAVTKTDSLEYNPGSYNLNNNTDYNPTPLAAASSSKYTLDTFD
NAKSKGSSLEYVPKVVAQPKKYSSVVPNNKYVIDDSKPSTDLEYDPLSNYSARLLSKAST
KEQKGTKRRKVSSYGESYSPSRKKHCNVSNNYGTYAKFSDSEEDVDLEYQPTSVSRLQSK
VSSENESSDGLSVKEKSTKLEDLNSREMKEMAVQYDMEDIESPRKNLVKDLSEKNTKLAK
ASSSKNEQNVEDKDSKEIAKDKMKKKKTDGSKPPCHKEMGKEKSKNTKKERTVKKEEKLK
IKNGEKSCKEKSIKAKPDGNLKKSEKEKLEKVAKKEKSKSTSCAASSGKSKSEGLWKGAS
PEKLEGSTKDSIVKAADLKNGKQASRDKHKDKGGKTSASDRPKKKASPAKVGNSKGKCKP
KQRTLSHVDLFGDESGEEEKVGQPPATFPNMSSDSDGDDGSCGFQSDNEGTKSIQRSKLS
KSSSSSSSSDDIDYSVLEKDLDYDSDPMEECLRIFNESTDVKTEDKGRLGKQPLKEEASE
EKMDDALTTLFPGQKRRISHLAKQGNADVPNKPVIRPYRPPTAQEVCYRRIQLAQQQAAQ
LAVAVQRASLALPGEKKRIAHVPNVALSTAAKQITVGIKKTIPVSSVTAPNGSEAPALTL
KARTLTGMTSKTTTTALQKRIAHAPSLQSASLKRPVIPTEFGAKVPTNIRQRYLNLFIDE
CLKFCSSSQEAFDKALSEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPPCVNKTSNR
KVVSHEAVLGGKLAAKTSFTLNQSGNLRAEDLTGAALYRRLKEYLLTEEQMKENGYPMPH
PEKAGRAVVFTVEEKKTTDSSCRVCCRCGTEYMVSPSGNCIRKEECLHHWGRLRKQRVPG
GWETHYSCCSGAVGSPGCQVAKQHVQDGRKENLEGFVKTFEKLPTTDGYPGIYALDCEMC
YTKQGLELTRVTVINSDLKVVYDTFVKPDNKVVDYNTRFSGVTEEDLANASITLRDVQAV
LLNMFSTDTILIGHSLESDLFALKLIHSTVVDTAVVFPHRLGLPYKRALRTLMADYLKRI
IQDNVEGHDSSEDASACMELMIWKIKEDAKVKR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgacccagcggctacttccgcggcatcgactgccccttcctcggcgccggcggc
cggggcgcggggggcccgccctgccggaggccgcactgccacttccgccacccgccggcc
gcccgcggcgccgccgccccggagcccggggccaagcccggcgcagagcttggttatgat
ccatataaccctgagcttcccaagccttcaacccaaatagctaatggtgctttgggtgac
attgcagtgtcaacccctagcattctacagctggagttggtcaacaaggccatcgaagag
gtcagatatgaagttgagagagagcagaaaaagtatgaggagttattggagacaacaaag
gaatacagcacatctgaggcttcttcacttatttccaaaacatctgtgtcagctgctgtg
acaaaaacagactctttagaatataacccaggtagctataatttgaataataacacagac
tacaaccctacgcctttggctgctgctagctcaagtaaatacaccttggatacgtttgac
aatgccaaatccaaaggtagttcattggaatacgttcccaaggtcgtagctcagcctaaa
aaatacagtagcgttgtccctaacaataagtatgtgattgatgactctaagccttctacg
gacttggaatatgaccctctttcaaattactcagcaagacttttgagcaaagccagcaca
aaggagcagaaggggaccaaaaggagaaaggtctctagttatggagaatcttattctcct
tcacggaaaaagcactgtaatgtatccaataactatggaacgtatgccaaattctctgac
tctgaagaggatgttgacttggaataccagccaacctctgttagccgtttacaatctaaa
gtcagttctgaaaatgaatcaagtgatgggttgtccgtcaaagaaaagagcaccaaactg
gaagacctaaattcccgggagatgaaagaaatggcagtgcagtatgacatggaagatatt
gaaagtccacggaaaaatcttgtcaaagacttgtcagagaagaatacgaaattggcaaag
gcatcttctagcaagaatgaacagaatgttgaagacaaagacagcaaagagattgcaaaa
gacaaaatgaaaaagaaaaaaacagatggcagtaagcccccttgccacaaagagatgggc
aaggagaaaagtaaaaacacaaagaaagagagaacagtcaagaaagaagaaaaattgaaa
attaaaaatggagaaaaaagctgtaaagagaaaagcatcaaagcaaaacctgatggaaat
ttgaagaaatctgaaaaagagaaattggaaaaagtggctaagaaagaaaagtcgaagtcc
accagctgtgcagccagctcagggaaaagcaagagtgaggggctctggaagggagctagc
ccagagaagctggaaggtagcacgaaggactccatagtaaaggcagctgatctgaaaaat
ggcaaacaagcctcaagggataaacacaaagataaagggggcaagacttctgcctctgat
cgtccaaaaaagaaggcaagccctgcgaaagtggggaactcaaaaggcaagtgtaagccg
aaacaacggacgttgagccacgttgacctatttggagatgagagcggggaggaggagaag
gtgggccaacctccggctacatttccaaacatgagctcagactccgatggagatgatggc
tcctgtggttttcagagtgataatgaagggacaaagagcattcagcgctccaagctgtcc
aagtcatcttcatcctcctcatcctctgatgacattgattattccgtcctggagaaagat
ttggattatgactctgaccccatggaagagtgcctcagaatttttaacgaatccacggat
gtgaaaacagaagacaagggaaggctagggaagcagccactgaaagaagaggcaagtgaa
gaaaagatggatgacgctttaaccactctatttcctggccaaaaaaggaggatctctcac
cttgccaagcaaggaaacgcagatgtcccgaacaaaccagtaatccggccgtaccgtcca
ccaactgcccaggaggtctgttaccggaggattcagctggcacagcagcaggcagcccag
ctggctgtggcagtccaaagggcctctcttgccttgccaggagaaaagaaaaggattgct
cacgtgccaaatgtagcgctttccacagcagcaaagcagatcactgtgggtattaagaaa
accattccagtcagcagcgttacagcccccaatggctctgaagcacctgctcttaccctg
aaggcccgtacgctaactggcatgacatctaagaccactactactgctttacagaaaaga
atagcacatgctcccagtctacagagcgctagcttaaagaggcccgttattcccactgag
tttggtgccaaagtcccaaccaacattcgccaaaggtatctcaatctcttcattgacgag
tgcctgaagttctgctcttcctcacaggaagcgtttgacaaggctctgtcagaggagaag
gtggcttatgaacgcagtaccagccggaacatctacctgaacgtggcagtgaatacgtta
aagaagctaagaagtctagtgcccaattccccgccttgtgtaaacaagaccagtaacagg
aaagtggtgtcccacgaagctgtgctaggaggaaaactcgcagctaagacgagctttacg
ctaaaccagtcagggaacttgcgggcggaggacttgacaggagctgctttgtacagaaga
ctgaaggagtatctcctgacggaagagcagatgaaggaaaatggttacccaatgccacat
ccagagaaagccggccgtgctgtcgttttcactgtggaagagaagaaaacaactgactct
tcatgcagggtttgctgccgctgtggtactgaatacatggtctccccatctggaaactgt
attcgcaaagaggagtgtctccatcactggggaaggctacgcaagcagcgagtgccgggg
ggctgggaaacacactatagctgctgttcaggagctgtgggttcaccgggatgccaggtg
gccaaacaacatgtccaagatggccggaaggagaaccttgagggttttgtgaaaactttt
gagaaactgcctactaccgatggctatccaggaatctatgctttagactgtgaaatgtgt
tacaccaagcaaggactggagctgacaagagtaacagtgatcaactctgacctgaaagtg
gtctatgacacctttgtcaaacctgacaacaaagtggtggactacaacaccaggttttca
ggtgtgacggaggaggacctggcgaacgcgagcatcaccctgcgagacgtgcaagctgtt
ctattaaacatgttcagcacagacacgattttgataggacacagcttggaaagtgattta
tttgcactaaagcttatccatagcacagtggtggatactgcagtcgtctttccccaccgg
ctgggtttgccttacaaacgagcactccggacgctgatggctgactacctcaagcgcatc
atccaggacaatgtggaaggtcatgactccagtgaggacgccagcgcttgcatggagctg
atgatctggaagatcaaagaagatgctaaagtgaaacgatga
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