Chelonia mydas (green sea turtle): 102943356 Help Entry 102943356         CDS       T02989                                  Symbol MSH6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism cmy  Chelonia mydas (green sea turtle) Pathway cmy03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cmy00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     102943356 (MSH6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cmy03400]     102943356 (MSH6) DNA repair and recombination proteins [BR:cmy03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      102943356 (MSH6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  102943356 NCBI-ProteinID:  XP_007064961 LinkDB All DBs Position 3:complement(178119542..178152770) Genome browser AA seq 1345 aa AA seqDB search MSRQSTLLRFFPKAQAPAPSPPAADRRKGWASSEAAGDEAALAAGGGAAEMGQSGGVEAH GKGRKKAARAPSVSCDYSPGDLVWAKMEGYPWWPCLVYNHPTEETVVRAKGKSSRVHVQF FDDSPTRGWVSIKYLKPYKGSAVRETQRGGMFYSSKPEIKRAMEMADEAMRKDKTKRLEL AVCNEPSDTEDEEEMEVSESASGNSEDYDSEEEEKKKKLLASRWRSGGKAKKRRVVDSDS NNEGSDEEFKPDAKDEASSDEASSGMGEGESASSETDTKMDADSPVKVPSKRKRETDRKP AKRNSLENDLPETPKRAITVLLETKSRLTSFAAPENFESQPNVSSSTIWEHDKLEWLQEG KKRDGCRRRQSDPHYDPCTLHVPEDYLNKCTPGMRKWWQLKSQNFDAVIFYKVGKFYELY HMDAVTGVNELGLIFMKGIWAHSGFPEIAFGRFSDVLVQKGYKVVRVEQTETPEMMEARC RSLAHPTKFDRVVRREICRIITKGTQTYSVLDGDPSEKLNKYLLSVKEKVEDTSGHHRAY GVCFVDTSVGKFYVGQFPDDRHCSRFRTLVAHYTPVQILFEKGNLSADTHKILKGSLSSS MQEGLISGSQFWNASKTLKTLIEEGYFEDKQNVDDRFILPPVIKSMTSEIDSLGLTPGEN CELALSALGGCVFYLKKCLIDQELLSLANFEEYVPVDIDVVKAKGSSSFFAKTNQRMVLD GVTLTNLEILQNGTTGTTEGTLLERIDICCTPFGKRLLKQWICAPLCNPHSINDRLDAVE DLLAVPDKMFEVSELLKKLPDLERLLSKIHSIGSPLKSETHPDNRAIFYEETRYSKKKIT DFLSTLEGFKVMLETIGIMEEIAADFKSKILKQLVTLKSKNPEGCFPDLSTELKRWDTAF DHNEARKTGVITPKAGFDPDYDKALKDITDIEENLREYLDKQRKRLGFKAMLYWGAGKNR YQMEIPENAISHNLPEEYELKSTRKGYKRYWTKEIEKMLAEMVNAEERRDAALKDCMRRL FHNFDKNSKDWQTAVECFAVLDVLMCLANYSQEGDGPFCRPVILLPEQNTPPFLELKGSR HPCITKTFFGDDFIPNDIVIGSKNEDEDSNSEAYCVLVTGPNMGGKSTLMRQAGLLAIMA QLGCYVPAEACRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILRHATEHSLVLVDE LGRGTATFDGTAIASAVVKELAENIKCRTLFSTHYYSLVEDYSHSAAVQLGHMACMVENE SEDPSQETITFLYKFIRGACPKSYGFNAARLANIPEEVIQKGHKKARDFEKVTLSLRLFR HLCLVAENAAGDKAVPKLMTVINNL NT seq 4038 nt NT seq  +upstreamnt  +downstreamnt atgtctcggcaaagcaccctgctccgcttcttccccaaggcccaggccccggccccttct cctccggccgcagacaggcggaagggctgggcctccagcgaggcagccggggatgaggca gccctggctgccggcggcggcgcggcggagatgggacaatccggcggagtcgaggcccat gggaaggggagaaaaaaggcggcccgggcccccagtgtctcctgtgattattcacctggt gatttggtttgggccaagatggaagggtacccttggtggccgtgtcttgtatacaaccac ccaactgaagaaacagtagtcagagcgaagggaaaatcctctcgtgtacatgtacaattt tttgatgacagcccaacaaggggctgggttagcattaaatacttaaagccatataaaggc tcagcggttagggaaacgcagaggggaggtatgttttacagttcaaagcctgaaattaaa agagcaatggaaatggcagatgaggctatgcgcaaagataaaactaagcggcttgagctg gcagtgtgcaatgaaccttcagatactgaagatgaggaagagatggaggttagtgaaagt gcttcgggcaacagtgaagattatgatagtgaggaggaggagaaaaaaaaaaaactgctg gcaagcaggtggagaagtggtgggaaagccaaaaaacgaagagtggtggactctgacagt aacaatgaaggttcagatgaagagtttaaaccagatgctaaagatgaagcaagcagtgat gaagcaagcagcggaatgggcgaaggtgaatctgccagctctgagacagacacgaagatg gatgcagatagtcctgtgaaagtcccttctaaacgaaagagagaaactgaccgcaaacct gctaaaaggaatagcttggaaaatgaccttcctgaaacacccaaaagagcaataactgtt ttattagaaaccaagtcaaggctgacctcttttgcagcgcctgaaaactttgagtctcag ccaaatgttagcagttctactatatgggaacatgataaacttgaatggcttcaggaaggg aaaaagagagatggatgtagaagacgacaaagtgatcctcattacgacccatgtaccctt catgtgccagaggactaccttaacaagtgtaccccaggaatgcggaagtggtggcagcta aagtctcagaactttgatgctgtaatcttctacaaagttgggaagttctatgagttgtat catatggatgcagtcactggtgtaaatgagctgggactgatatttatgaaaggtatttgg gcccattcaggttttccagaaattgcatttggcagattctctgatgttctagtacagaag gggtacaaagtagtccgggttgagcagacagagactcctgagatgatggaagcacgctgc agatccctggcccacccaacaaagtttgatagggttgtacgcagagaaatatgcaggata attaccaaagggacacagacctacagtgttctggatggagacccttctgaaaaacttaat aaataccttctcagtgtaaaagaaaaagttgaagacacttctggccaccaccgtgcatat ggtgtctgttttgttgacacatcggtgggaaaattttatgtgggccagtttccagatgac cgccactgctccaggtttagaactttggtggcacactacactccggtgcagatcctgttt gagaagggaaatctgtctgcagacacacacaagatattaaaaggctcactctcttcttcc atgcaagaaggcttgatctctggctcccagttctggaatgcatctaaaacactgaaaact ctaattgaagaaggctactttgaggataagcaaaatgttgatgataggtttattctgcct cctgtgatcaaatccatgacatcagaaattgactctctgggtcttactcctggtgaaaac tgtgagttagctttgtcagctctcggtggatgtgtcttctacctcaagaaatgtcttatt gaccaggagctcttatctctggcaaactttgaggagtatgttcctgtggacattgatgtt gtaaaagctaaaggatcaagcagtttctttgctaaaactaatcagcggatggtgctggat ggggtgacactaacaaacttggaaatcctgcagaatggaactactggcaccacagaaggc acattactggaaaggattgacatttgttgtaccccttttggaaagcgactcctgaaacag tggatatgtgcacccctctgtaatccccactccatcaatgatcgtttggatgcagttgaa gatcttctggcagttcctgataaaatgtttgaagttagtgaacttctgaagaaacttcca gatcttgaaaggctcctgagcaaaattcacagtattggatcaccacttaaaagtgagact catccagacaacagggctatcttttatgaagaaaccagatacagtaaaaaaaaaatcact gacttcttgtctacgttggaaggatttaaagtaatgcttgagaccatagggatcatggaa gaaattgctgctgatttcaaatctaaaatacttaagcagttagtcactctgaagtcgaaa aatccagagggctgttttccagacctgagtacagaacttaaaagatgggatactgctttt gaccataatgaggctcgaaagactggagtgattactccgaaggctggttttgaccctgat tatgataaagcactaaaggatattacagacattgaagagaatcttcgggagtatttggat aaacaacgcaaacggcttggattcaaagccatgctgtattggggagcaggcaaaaaccgc taccaaatggaaattccagaaaatgcaatctctcacaatttgcctgaggaatatgaattg aagtccaccagaaagggttataaacgttactggaccaaggagatagagaagatgctggcg gagatggtcaatgctgaagaacggagagatgcagcgctgaaagactgtatgaggagactg ttccacaattttgataaaaatagcaaagactggcaaacagcagtggaatgctttgctgta ttagatgtcttgatgtgcctcgctaactatagtcaagagggtgatggaccattctgccga cctgtaattctactgccagaacagaacactccacccttcttggagcttaaaggttcacgc catccatgcattacaaaaacgttttttggcgatgattttattcctaatgatattgtgata ggttccaagaatgaagatgaagacagcaatagtgaagcctactgtgttttagtaactggc ccaaacatgggtggcaaatctacactaatgagacaggctggccttttggcaataatggct cagttgggatgctatgtacctgctgaagcttgcaggcttactcctattgacagagtattt acaagactaggtgcctcggacagaattatgtcaggagagagcaccttttttgttgagctg agtgagacttccagcatactccggcatgcaacggagcattcccttgtgcttgtggatgaa ctaggtagaggcacagctacttttgatggcacagctatagcaagtgcagttgttaaagaa cttgcagaaaatataaagtgtcgcacacttttttccacacattattattcattagtagag gactattcacacagtgctgctgtgcaactgggccatatggcatgtatggttgaaaatgag agtgaagatccaagccaggaaactattacattcctctataaattcattagaggagcttgt cctaaaagctatggcttcaatgcagcaaggcttgctaatattccagaggaagttattcag aaaggtcacaaaaaagcacgagactttgagaaagttacactttcactgagactgtttagg cacctttgcctggtggcagagaatgcagcaggagataaagctgttcctaaactgatgact gtgatcaataatctgtaa

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