Chelonia mydas (green sea turtle): 102943588
Help
Entry
102943588 CDS
T02989
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X4
KO
K16498
protocadherin delta 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102943588 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmy01009
]
102943588 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmy04515
]
102943588 (PCDH7)
Protein phosphatases and associated proteins [BR:
cmy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102943588 (PCDH7)
Cell adhesion molecules [BR:
cmy04515
]
Cadherins
Protocadherins
102943588 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
LYRIC
KIAA1549
Motif
Other DBs
NCBI-GeneID:
102943588
NCBI-ProteinID:
XP_027686602
LinkDB
All DBs
Position
4:complement(102787350..103173457)
Genome browser
AA seq
1253 aa
AA seq
DB search
MRKMRTLFGFVHCCCCCFLLLLPPPLWVSLAAAKQLLRYRLAEEGPADIRIGNVASDLGI
VTGSGEVTFSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVSVI
GPSQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGI
ERYELLQEPGGDGGRRGGGGSASAAESALYPGGSKRRQEPDGAARSSVFELQVADTPDGE
KQPQLIVKGALDREQRDSYELSLRVRDGGDPARSSQAILRVLITDVNDNSPRFEKSVYEA
DLAENSSPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR
EEVNQLRFTVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGRIPLRDGVASVAED
VLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFLHTSAPLD
YEAVREYNVVIVAVDSGSPSLSSNNSLLVRVADTNDNPPVFGQAVLEVSFPENNSPGERV
ATVVATDADSGKNAEIFYSLEPSPLSSEAPGGIFSIDPDSGDVLVQAVLDREQRDTYEFQ
VTARDKGAPALQGSTTVVVRVADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDSDR
GRNAELSLSIQPGEQDQAAGIFSIENDTGTIYSTISFDREQQTSYTFKVKALDGGEPPRS
ATATVNLFVMDENDNPPAVTFPSNSSYTVLPPSSNLRTVVATVLATDADTGLNADLNFSI
VGGNPFKLFEIDPASGVVSLVGKLAPKHYGLHRLVVQVNDSGQPPQSTTALLHVFVNESL
SNATVVESQVARSLHTPLAQDIAGDPSYELSKQRLSIVIGVVAGIMTVILLILVVVMARY
CRSKGKHGYEAGKKDHEDFFTPQQHDKAKKPKKDKKGKKGKQPLYSSIVTVEASKPNGQR
YDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQE
LPPANTFVGAGDNISIGSDHCSEYSCQASSKYSKQPFRRVTFSVVSQPQDPHQGSLQSCY
DSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVALTGK
CTRECDEYGHSDSCWMPVRTSPERKQKSQPKLSTFMPVDERGSQEKLANGEASLMGDRNR
NLLNKKLTSSYETFNAASFSKNEEANPEDIPLTQTGEYKPSPVNTLTRREVYL
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatgcggactctctttggctttgtgcattgctgctgctgttgcttcttgctc
ctgctgcctccgccgctctgggtcagcctggccgcggccaagcagctgctgaggtaccgg
ctggccgaggaaggacctgccgacatccgcataggcaacgtggcttcggacctgggcatc
gtgactggctctggagaggtgacattcagcctggagtcgggctccgactacctgaagatc
gataacatgaccggggagctgagcaccaccgagcggcgcatagaccgcgagaagctgccg
cagtgccagatgatcttcgatgagaacgagtgcttcctggacttcgaggtctcggtgatc
ggcccttcgcagagctgggtggacctcttcgagggccgggtcatcatcctggacatcaac
gacaacacccccaccttcccctcgcccgtcctcacccttaccgtggaggagaaccggccc
gtagggaccctctatctcctccccaccgccaccgacagagacttcggccgcaacggcatc
gagcgctacgagctgctgcaagagcccggcggggacgggggcagacgcggaggagggggg
tcggcttctgccgctgagagcgccctctaccccggcggcagtaagaggaggcaggagccg
gacggggcggcccgcagcagcgtgttcgagctgcaggtggccgacacccctgacggggag
aagcagccgcagctgattgtcaagggggcgctggaccgagagcagagggactcctatgaa
ctgagcctgagggtgcgggacggcggcgacccggcccgctcctcccaggccatcctgagg
gtgctgatcaccgacgtgaacgacaacagcccccgctttgagaagagcgtctacgaggcg
gacctggcggagaacagcagccccgggacccccatcctgcagctgcgggccgccgacctg
gacgtgggggtgaacgggcagatcgagtacgtcttcggggcggccaccgagtcggtgcgg
cgcctgctgcgtctggacgagacctcgggctggctcagcgtcttgcaccgcatcgaccgg
gaggaggtgaaccagctccgcttcaccgtcatggcccgggaccggggccagccgcccaag
accgacaaggccacggtggtgctgaacatccgcgacgagaacgacaacgtgcccaccatc
gacatccgcaagatcggccgcatcccgctgcgggacggggtggccagcgtggccgaggac
gtgctggtggacacccccatcgccctggtgcaggtgtccgaccgcgaccagggcgagaac
ggcgtggtgacctgcacggtggtaggggacgtgcccttccagctcaagccggccagcgag
ggcgagggggagccccagaacaagcgcaagtacttcctgcacacctcggccccgctggac
tacgaggccgtccgtgaatacaacgtggtgatcgtggccgtggactcgggcagccccagc
ctgtccagcaacaactcgctgctggtgcgggtggcggacaccaacgacaacccgccggtg
ttcggccaggccgtgctggaggtctccttcccggagaacaactcgcccggggagagggtg
gccacggtggtggccacggacgcggacagcggcaagaacgccgagatcttctactcgctg
gagccctcgcccctctcctcggaggcgcccggcggcatcttcagcatcgacccggactcc
ggggacgtgctggtgcaggcggtgctggaccgcgagcagcgcgacacctacgagttccag
gtgacggcccgggacaagggggcgccggccctgcagggctccaccacggtggtggtgcgg
gtggccgaccgcaacgacaacgagccgcgcttcatgcaggacgtgttcaccttctacgtg
aaggagaacctgcagcccaacagccccgtgggcatggtgaccgtgatggactccgaccgg
ggccgcaacgccgagctcagcctctccatccagcccggggagcaggaccaggccgccggc
atcttctccatcgagaacgacaccggcaccatctactccaccatctccttcgaccgggag
cagcagaccagctacaccttcaaggtcaaggcgctggacggaggggagccgccccgctcg
gccaccgccacagtcaatctcttcgtgatggacgagaacgacaacccgcccgccgtcact
ttccccagcaacagctcctacaccgtcctgcccccctccagcaacctgcgcaccgtggtg
gccaccgtgctggccaccgacgcggacacgggcctcaacgccgacctcaacttcagcatc
gtcgggggcaaccccttcaagctcttcgagatcgacccggccagcggcgtggtgtccttg
gtaggcaagctggcccccaagcactacggcctgcaccgcctggtggtgcaggtgaacgac
agcggccagccgccccagtccaccaccgccttgctccacgtcttcgtcaacgagagcctc
tccaacgccaccgtggtggagagccaggtggcccgcagcctgcacacgcccctggcccag
gacatcgccggcgaccccagctacgagctgagcaagcagcggctcagcatcgtcatcggg
gtggtggccggcatcatgacggtgatcctgctcatcctggtggtggtcatggcccggtac
tgccgttccaagggcaagcacggctacgaggcgggcaagaaagaccacgaggacttcttc
accccgcagcagcacgacaaggccaagaagcccaagaaggacaagaaaggcaagaagggc
aagcagcccctctacagcagcatcgtcaccgtggaggcctccaagcccaacgggcagcgc
tacgacagcgtcaacgagaagctctccgacagccccagcatgggccgataccgctcggtc
aacggcggcccgggcagcccggacctggccaggcattacaaatccagctcgccgctcccc
actgtccagcttcacccgcagtcccccaccgctgggaaaaagcaccaggccgtgcaggaa
ctgcccccggccaatacttttgtaggggcaggagacaacatctccattggatcggatcac
tgctccgagtacagctgtcaggccagcagcaagtacagcaagcagccatttcgtagagtg
acgttttctgttgtgagtcagcctcaggacccacatcaagggtcattgcagagttgctat
gacagcggtctggaggagtcagaaacaccaagcagtaagagttcatcagggccaagactg
ggtgcccttccactcccagaggacaactacgaaaggactacgccggatggcagtgttggt
gaggcagagcatatggaaaatgactcgaggcctctaccagatgtagccctgacggggaag
tgtactcgagagtgtgatgaatatggccactcggactcctgctggatgccagttcgcact
tcgcctgaaaggaagcagaagagccagccaaaactctccaccttcatgcccgttgatgaa
cgaggcagtcaggaaaagctggccaatggagaagcctccctcatgggtgatcgcaacaga
aacctcctgaacaaaaagttgacctcatcctatgagaccttcaacgcagctagcttcagc
aaaaatgaggaagccaatccagaggatatcccccttacacagacaggggaatacaagcca
tctcctgtcaatactctaactagaagagaagtttacctgtag
DBGET
integrated database retrieval system