Chelonia mydas (green sea turtle): 102943803
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Entry
102943803 CDS
T02989
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cmy01001
]
102943803 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmy04121
]
102943803 (TRIM28)
Enzymes [BR:
cmy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102943803 (TRIM28)
Protein kinases [BR:
cmy01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
102943803 (TRIM28)
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102943803 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
zf-RING_UBOX
PHD
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
102943803
NCBI-ProteinID:
XP_037744616
LinkDB
All DBs
Position
23:complement(13800661..13852249)
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AA seq
926 aa
AA seq
DB search
MSGSAASAEAGGPGGEKRPEALELLEKCGVCRERLRAEREPRLLPCLHSVCRECLRAEPA
AAADGEAANNKEGQVVDCPVCKHQCYLKDIVENYFLRDSGAEAATDSKDANQCCTSCDDN
APATSYCVECSEPLCETCVEAHQRVKYTKDHTVRSTGPSKSKEGERTVYCSVHKHEPLVL
FCDTCDTLTCRDCQLNAHKDHQYQFLEDAVRNQRKMLAALVKRLGDKHANLQKSTKEVRT
SIRQVTDVQKRVQVDVKMAILQIMKELNKRGKVLVNDAQKVTEGQQEKLERQHWAMTKLQ
RHQEHILRFASWALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPQGDMKFQWDLNAWT
KSAETFGTIVSERSGTLQAAAPNAQIQRANATGPAAAGGGVKQVSGTPQVLAPLTNVPPM
VPNRPEAAVSQSQPPPLQPPVQPTRILTAPVVKSGAGSTYVQPMQLQLVQPRGLLQMNGQ
QQVMGQLVLLPQVNGTQGVQQVSVQSTVISKGQLAPGALLQPMVSPNSQADCFISEGSAP
ASSTVQPMDTQEEGIGDLADSTEAHVSGMKRPRPSDGNVMRKVPRVSLERLDLDLTADSQ
PPVFKVFPGNSNEDYNLIVIERGAQQAAAQPPSTTLPGTIVKEEQMEAAIDYPAEEPRDT
KPVVLPQDILAAEGSVSRLISPSGSIGSSLDVTPGQSQEGALESANAAHCRVCRKAGSVV
MCNQCEQCYHLDCHLPVLQEIPSQEWKCLLCQELPAPGEEDGTNFSTSEDDEGPNKLTPL
EQRKCERVLLELLCHEPCRPLHRLSTATEGQDTIDLTLIRAKLQEKLSPPYSSSEEFAQD
VWRMIKQFNKLTEDKEDVQSIIGLQRFFEAKWSASFGDRKFSSALVEPIPLDEQRSESGS
SFTHRSSPAGSLGEAPAASAGAGEEE
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctcggcggcctcggccgaggcgggcggccccggcggggagaagcggcccgag
gcgctggagctgctggagaagtgcggcgtgtgccgcgagcggctgcgggccgagcgggag
ccccgcctgctgccctgcctccactccgtctgccgggagtgcctgcgggccgagccggcc
gccgccgccgacggggaggccgccaacaacaaagagggacaagtggtggactgccctgtg
tgcaaacaccagtgttacctcaaggacatagtggagaactacttcctgagagacagcggg
gcggaggcagccacagacagcaaggatgccaaccagtgctgcaccagctgtgatgacaac
gcccctgctaccagctactgtgtggagtgctcagagccgctgtgcgagacatgtgtggaa
gcccaccagagggtgaagtacaccaaagaccacacggtcagatccacaggcccttcgaag
tcaaaagagggtgagcgcacagtctactgctccgtgcacaagcatgagcccctggtgctg
ttctgtgatacctgtgacactctgacctgtcgggactgccagctcaatgcccacaaggat
caccaataccagttcttggaggatgctgtcaggaatcagcgcaagatgctggctgcgctg
gtgaagcgcctgggggacaagcacgccaacctgcagaaatccaccaaggaagtgcgcacc
tcgatccggcaggtgacggatgtgcagaagagggtgcaggtggacgtgaagatggccatc
ctgcaaatcatgaaggagctcaacaaacggggcaaggtgctggtcaatgacgcacagaaa
gtgaccgaggggcagcaggagaagctggagcgccagcactgggccatgaccaagttgcag
cgccatcaggagcacatcctgcgtttcgcctcctgggccctggagagtgacaacaacact
gccctgctgctttccaagaaactgatctacttccagctgcatcgtgccctcaagatgatc
gtagaccccgtggagccccaaggggacatgaagttccagtgggatcttaacgcctggacc
aagagtgcggagaccttcggaacaattgtctcagagcggagcggcaccctgcaggccgca
gcccccaacgcgcagatccagcgtgccaacgccaccggcccggcggcggcaggaggaggg
gtgaaacaggtctccggcactccccaggtactggctcctcttacgaatgtccctcccatg
gtcccgaaccggcccgaggctgctgtctcccagagccagcctccgcctctgcagccacca
gtgcagcccacccggatcctcacggcccccgtggttaagagtggtgccggcagcacctac
gtacagcccatgcagctccagttggtgcagccccgtggtctcctacagatgaacggccag
cagcaagtcatgggccagctggtactcctgcctcaggtcaatgggactcagggcgtgcaa
caagtctcggtgcagtccaccgtcatcagcaagggacagctggccccaggagccctgctg
cagccgatggtctctcccaacagccaggcagactgcttcatcagcgagggtagcgcccca
gcatcctccactgtgcagcccatggacacccaggaggaaggcattggagacctggcagac
agcactgaggcccacgtatcgggaatgaagaggcccaggccttcggacggcaacgtcatg
cgcaaggtgccgcgggtgagcctggagcggctggacctggacctgacggccgacagccag
ccacctgtcttcaaggtcttccccggcaacagtaacgaggactacaacctgatcgtcatt
gagcgtggggcccagcaggctgctgcccagccccccagcaccaccctgcctggaaccata
gtcaaggaggagcagatggaggcagcgatcgactatccagcagaggagcccagagacacc
aagcccgttgtcctgccccaggatatcctggccgccgagggctccgtgtcccgcctcatc
tcccccagtggcagcattggctccagtctggatgtgacgccaggccagagccaggagggg
gcgctggagtcagccaatgctgcccactgtagagtgtgccggaaggcgggctctgttgtg
atgtgtaaccagtgtgagcagtgctaccatttggactgccacctcccagtgctgcaggag
atccccagtcaggagtggaagtgcctgctgtgccaggaactgccggcgcctggtgaggag
gacggcaccaacttctccacctcggaagatgacgagggccccaataaactcacccccttg
gagcagaggaagtgtgagcgtgtcctgctggagctgctgtgccatgagccgtgtcggcct
ctccaccggctttcgaccgccacggagggtcaggacaccatcgacctgaccctgatccga
gccaagctgcaggagaagctctccccaccctacagctcctctgaggagtttgcccaggat
gtgtggcggatgatcaagcagttcaacaagctgacggaggacaaggaagatgtccagtcc
atcatcgggctgcagcgcttctttgaggccaagtggagcgcctccttcggtgaccggaag
ttctcctctgcgctggtggagcccatcccgctggatgagcagcggagcgagagcggcagc
agcttcacccaccgcagctcccctgccggctccctgggcgaggcccccgctgcctcggca
ggcgctggggaggaggagtga
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