KEGG   Chelonia mydas (green sea turtle): 102943832
Entry
102943832         CDS       T02989                                 
Symbol
UFD1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
  KO
K14016  ubiquitin fusion degradation protein 1
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102943832 (UFD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmy03009]
    102943832 (UFD1)
Ribosome biogenesis [BR:cmy03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    102943832 (UFD1)
SSDB
Motif
Pfam: UFD1_N1 UFD1_N2 CDC48_2
Other DBs
NCBI-GeneID: 102943832
NCBI-ProteinID: XP_007055088
LinkDB
Position
15:complement(15885050..15896676)
AA seq 307 aa
MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERHTQHEESTDVEADHSGYVSDLGFRAFSGSGNRLDGKKK
GVEPSPSPIKPGDIRRGIPNYDFKIGRITFIRNSRPLVKKVEEDDSGSRFIAFSGEGQSL
RKKGRKP
NT seq 924 nt   +upstreamnt  +downstreamnt
atgttttcttttaatatgtttgatcatccaatcccccgggttttccagaaccgcttctca
acccagtatcgttgcttctcagtatccatgcttgcaggacctaatgacaggtcagatgtg
gagaaaggcgggaagataattatgccaccatctgccttggatcaactcagtcgacttaac
attacgtaccctatgttgtttaagctgactaataaaaattcagatcgaatgacgcattgt
ggtgtgctagaatttgtggctgatgaaggcatttgttaccttccacattggatgatgcag
aacttgcttctggaggaaggaggcctggtgcaggtagagagtgttaatcttcaagtggct
acttactcaaaatttcaaccacaaagtccagatttccttgacatcaccaatcccaaagct
gtattagaaaatgctttgagaaactttgcttgtctaaccaccggggatgttattgccatc
aactacaatgagaagatctacgagcttcgagtaatggagaccaaacctgacaaagctgtg
tccatcatagagtgtgatatgaatgtggattttgatgcacctttgggatacaaagaacca
gaaagacacacacaacatgaggagagcacagacgttgaagcagaccacagtggctatgtg
agtgacctaggatttcgtgcattctctggctctgggaacaggctagatggcaagaagaaa
ggtgtcgagcctagtccctcgccaattaaaccaggagacattcgaagaggaatacccaat
tatgacttcaaaatcggtaggatcacattcattagaaattcaagaccactagtcaagaaa
gttgaagaggatgactctggcagccggttcattgcattttcaggagaaggccagtccctg
cgcaagaagggaagaaaaccataa

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