Chelonia mydas (green sea turtle): 102943852
Help
Entry
102943852 CDS
T02989
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102943852 (VPS50)
Membrane trafficking [BR:
cmy04131
]
Protein recycling
Others
EARP complex
102943852 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
102943852
NCBI-ProteinID:
XP_037746611
LinkDB
All DBs
Position
2:complement(216365556..216561065)
Genome browser
AA seq
986 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQENVHDLSPVENFRIPSKEELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELEKLPAVLSLQEMEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNS
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDRDEGTASSSV
SDGNNVIGAEETNFDRSYVQKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISATITLFEHYCNGGNPFEIQVNSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTPVQSSSLPTSSREQYNARQFESTGLGLSSSRLRTTLNRIQESLIDLEVSADTTGTLTA
AEERKEKVPSPHLSHLVVLTSGNTLYGLAERVVATESLVFLAEQFEFLQSHLDAVMPAAK
KPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDA
LLKEFEQFNRRLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNV
CLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtcactgatgacccgccagggtctcaaaagtccacaggagaacgtt
catgacctcagtcccgttgagaattttcggattcctagcaaggaggagctgagagaactc
cgggaacaaccaactgatcctcaagcccagcaagaaataattaacagcattgaagaagtg
tatttttccaatgattcctttgatattgtgaagtatgagttggagaagcttcctgcagtt
cttagtcttcaagaaatggaagaatacagagacaaattaaagcaacaacaagctgctgta
tctaaaaaggttgcagacttgattcttgaaaagcagcctgcatatgttaaggaacttgaa
cgagttacatctttacaaactggtcttcagttagctgcagtcatttgcacaaatggaaga
aggcacctgaatattgcaaaggaaggttttactcaagctagtttgggacttcttgcaaat
caaagaaaacgacagttgctgattggactgctgaagtctctgagaacaataaaaacactg
caaagaactgatgtacgtttaagtgaaatgttggaggaggaggactatccaggagctatt
caattgtgcttggaatgccagaaagcagccagtactttcaaacactacagttgtataagt
gaattgaattcaaaactgcaagacactttggaacaaatagaggaacaattagatgtagcc
ctctccaaaatatgcaagaactttgatatcagtcattataccaaggtgcagcaggcttac
agactccttggaaagacacagacagcgatggaccaactacatatgcacttcactcaagcc
attcacaacacagtgttccaagtagttcttgggtacgtagagctatgcgcaggaaactcg
gacaccaaatttcagaagctacagtacaaggacctctgcacacatattacatcagacagc
tacattccatgtcttgctgacctctgcaaagcactctgggaagtcatgctcagttattat
cgaacgatggaatggcatgagaaacatgaccgagatgagggaactgcttcgtcttctgtt
tcagatggcaacaatgtgattggagctgaggagaccaattttgaccgtagctatgtacaa
aagaaattagaacatggactttcacgaatatggcaggatgtgcagctgaaagtgaaaacg
tatctgctggggacagacatgtctaacttcaaatatgatgactttatctttgtactagat
atcattagcaggctgatgcaagttggggaagaattctgtggcagtaagtcagaagttttg
caagaatctattagaaaacaaagtgtgaactatttcaagaattatcacagaactcgtctt
gaagaattgcgaatgttcttggagaacgagacctgggagctttgtcctgttaagtcgagc
tttagtattttacagcttcatgagtttaaattcatggagcagtcacgttccccgtctgtg
tcgcctagtaagcagcctgcttcagcaatctcagcaacgataactttgtttgagcactat
tgtaatggaggaaatccatttgaaattcaggtcaacagcaaagatgacgagacagaagat
gtacttgcttctaatgggtatgagtctgatgaacaggagaaaagtgcctatcaagagtat
gacagtgacagtgatgttcctgaggagctgaaaagagattatgtggatgagcagacagga
gatgcccctgtaaaaagtgtttctagagaaaccctgaggagcaggaagcgatcagattat
aatctcaacaaggtgaatgcacccatcctaacaaacactacactgaatgtaataagactt
gttgggaaatacatgcagatgatgaacattttgaaaccaattgcatttgatgtgattcac
ttcatgtcccagctgtttgattactatctgtatgcagtgtatacgttttttggccgaaat
gacacgcctgtacagagttcttcacttcccacatctagcagggaacagtacaatgctagg
cagtttgaatcaacaggattgggtcttagtagtagcaggctgcgcactacactaaacagg
atacaggagagcctgattgatctggaggtctctgctgataccactggcaccctcacggct
gctgaagagagaaaggagaaggtgccaagcccacacctcagtcatctggtagttttaaca
tctggcaatactctctatggtttggcagagagagtggtagccacggaatccttggtgttt
ttggcggagcagtttgagttccttcagtcgcatcttgatgctgtgatgcctgcagcgaag
aaaccctttctccagcaattctactctcagactgtgtcaactgccagtgaactacgcaaa
ccaatttattggattgtagctgctaaagctattgattatgaacagatgctgctcctcatg
gctaatgtgaagtgggatgtgaaggagatcatgtcacaacacaacatatatgttgatgct
cttttaaaggaatttgaacagtttaacagaaggttgaatgaggtatctaaaagagtccgt
attccattgccagtgtcaaatattctttgggagcattgtatccgactagccaatagaact
attgtggaaggttatgccaatgtcaagaagtgtagcaatgaagggcgtgccctgatgcaa
ttggacttccagcagtttttaatgaagctagaaaagctaacagacattaggcctattccg
gataaggaatttgtggagacctacattaaagcttactatctgactgaaaatgacatggag
cgctggatcaaggagcacagggaatattccaccaagcagctgaccaatctggtgaatgtt
tgtctgggatcacacatcaacaaaaaagcgagacagaaactgctagcagcaattgatgac
atagacagacctaaaagataa
DBGET
integrated database retrieval system
