Chelonia mydas (green sea turtle): 102943946
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Entry
102943946 CDS
T02989
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102943946 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmy04147
]
102943946 (COPA)
Membrane trafficking [BR:
cmy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
102943946 (COPA)
Exosome [BR:
cmy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102943946 (COPA)
Exosomal proteins of bladder cancer cells
102943946 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
102943946
NCBI-ProteinID:
XP_037739475
LinkDB
All DBs
Position
24:complement(3233810..3266496)
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCSQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTQASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAAIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVDAGEGFGDEALGKGQEEGGGWEVEEDLDLPPELDVPAGLAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILGGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPAMYGYPHRNWKDAGLKNALPVVGLKLNDLIQRLQVCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEQ
QKRTCEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVSQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFRGQV
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctgactaagttcgagaccaagtcggcccgggtgaaagggctcagctttcacccgaag
cggccgtggatcctaacgagtttgcacaatggagtgatccagctgtgggattaccggatg
tgcacccttattgacaaatttgatgagcatgatggaccagtccgtggtattgatttccac
aaacagcagccactctttgtctctggaggtgatgactacaaaataaaggtctggaattac
aagctgcgccgctgtctcttcacgctgctcgggcacctggattacattcgcaccaccttc
ttccaccatgaatacccctggatcctgagtgcttctgatgatcagacaatccgggtttgg
aactggcagtccagaacctgtgtttgcgtgctgacaggacacaaccactatgtgatgtgc
tcccagttccatccctctgaggacctggtggtgtctgccagcttggatcagactgtgcgc
gtttgggatatttctggcctaaggaagaagaacctgtctcctggagctgtggagtcggat
gtcaggggaattactggagtggatttgttcgggacgacagatgcggtggtgaaacatgtt
cttgagggacatgatcgtggggtgaactgggctgctttccaccccacaatgcctctcatt
gtgtctggtgctgatgatcggcaggtgaagatctggaggatgaatgaatcaaaggcctgg
gaggttgacacctgccgtggacactacaacaatgtctcctgtgctgtctttcacccacgg
caggagctgatcctcagcaattcagaagataagagcatccgtgtctgggatatgtctaaa
cgcacgggcgtccagaccttccgccgagatcacgatcgcttttgggtgttggctgctcac
cccaacctcaatctctttgctgcaggccacgatggcggcatgatagtgttcaagctggag
cgtgagcggcctgcctatgcagtgcatgggaacatgctgtattacgtgaaggaccgtttc
ctgcgccaactcgacttcaacagctccaaagacgttgctgtcatgcagctgagaagtggt
tccaagttcccagtgttcaacatgtcgtacaacccagctgagaatgctgtcctgctctgc
acgagagccagtaacctggagaacagcacctatgacctgtacaccatcccaaaggacgca
gactcccagaaccctgatgccccggaagggaagcgttcctctgggctgacagctgtgtgg
gtagctcgcaaccgctttgcagtcctggatcgcatgcattcgatcctaatcaagaacctg
aagaatgagattaccaagaaagtgcaggtcccgaactgtgatgagattttctacgctggc
actgggaacctgttactgagggatgcagactcgatcaccctctttgatgtgcaacagaaa
cgaacccaggcttctgtgaagatctccaaggtgaagtatgtcatctggtcagctgacatg
tcccatgtggctctgctggctaagcatgccatcatgatctgcaaccggaagctagagtcc
ctgtgtaacatccatgagaatatccgtgtcaagagcggtgcctgggatgagagtggtgtc
ttcatctacaccaccagcaaccacatcaaatacgctgtcaccacaggggatcacggaatc
atccgcactctggacctgcctatctatgtcacccgcgtgaaggggaacaacgtgtactgt
ctagacagggaatgccgacccagggtgctcaccatcgaccccacggagttcaagttcaag
ctggcgctgatcaataggaagtatgatgaggtgttgcacatggtgaggaacgccaagctg
gtgggccagtccatcatcgcctacctgcagaagaagggctaccccgaggtggcgctgcat
ttcgtaaaggatgagaagacccggttcagcctggcactggagtgtggcaatatcgagatc
gctctggaggcagccaaggctctggatgacaagaattgttgggagaagctgggggaggtg
gccttgctgcagggaaaccatcagatcgtggagatgtgctaccagcgcaccaagaacttc
gacaggctctccttcctgtacctcatcacgggcaacctggagaagctccgcaagatgatg
aagatagctgagatccgtaaagacatgagtggccactatcagaatgccctgtacctcgga
gatgtagcagagagggtgaggatcctgaagaactgcgggcagaagtccctggcctatctc
accgctgcaacccatggcttggatgaagaagccgagagtctgaaggagacgtttgaccca
gaaaaggaaacgattccagacattgaccccaatgcaaagctgctccagccccctgctgcc
atcatgcctctggacactaactggccattgctcactgtctccaagggattctttgaagga
acaattgctagcaaaggcaaaggaggggcattggctgctgatattgatattgacacagtt
ggcactgaaggctggggagaggatgctgagctgcagctggatgaagatggctttgtggat
gccggggaaggctttggagacgaagcccttggtaaaggacaggaggaaggaggcggatgg
gaagttgaagaggatttggaccttccccctgagctggatgtccctgctggcctggcagga
ggagctgaggatggattctttgtgccacccaccaagggcaccagcccagctcaggtctgg
tgtaacaattcccagctgcctgttgatcacatcctgggtggttcctttgagacggccatg
cggctcctccacgaccaggtgggagtgactaattttggcccctacaagcagctcttcctg
cagacctatgcccggggccgcaccacttaccaagcactgccctgcctccccgccatgtat
ggatacccacatcgcaactggaaggacgccgggttgaagaatgccctccctgtcgtcggc
ctgaagctcaacgacctgatccagcgcctgcaagtctgctaccagctgaccacagctggc
aagttcgaggaggcggtggagaagttccgctccatcctgctgagcgtgccgctgctcgta
gtggataacaagcaggagatcgctgaggcccagcagctgattgccatctgccgagagtac
atcgtggggctgtcgatggagatcgagaggaagaagctccccaaagagaccctggagcag
cagaaacgcacctgcgagatggcagcctacttcacccactccaacctgcagcccgtccac
atgatccttgtgctgcgcaccgccctcaatctcttctttaagctcaaaaacttcaagaca
gctgccaccttcgctcgccggctcctggagctgggccccaagcccgaagtgtcgcagcag
acgcgcaagatcctgtccgcctgcgagaagaaccccaccgacacctaccagctcaactac
gacatgcacaaccccttcgacatctgcgccgcctcctaccggcccatctaccgcggcaag
ccggtggagaagtgcccgctcagcggtgcctgctactgccctgagttccgggggcaggtc
tgccgagtcaccacggtgacagagatcggcaaagacgtcattgggctgcgaatcagccca
ctccagttccgctaa
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