KEGG   Chelonia mydas (green sea turtle): 102943946
Entry
102943946         CDS       T02989                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmy04131]
    102943946 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmy04147]
    102943946 (COPA)
Membrane trafficking [BR:cmy04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    102943946 (COPA)
Exosome [BR:cmy04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102943946 (COPA)
  Exosomal proteins of bladder cancer cells
   102943946 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 102943946
NCBI-ProteinID: XP_037739475
LinkDB
Position
24:complement(3233810..3266496)
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCSQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTQASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAAIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVDAGEGFGDEALGKGQEEGGGWEVEEDLDLPPELDVPAGLAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILGGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPAMYGYPHRNWKDAGLKNALPVVGLKLNDLIQRLQVCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEQ
QKRTCEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVSQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFRGQV
CRVTTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctgactaagttcgagaccaagtcggcccgggtgaaagggctcagctttcacccgaag
cggccgtggatcctaacgagtttgcacaatggagtgatccagctgtgggattaccggatg
tgcacccttattgacaaatttgatgagcatgatggaccagtccgtggtattgatttccac
aaacagcagccactctttgtctctggaggtgatgactacaaaataaaggtctggaattac
aagctgcgccgctgtctcttcacgctgctcgggcacctggattacattcgcaccaccttc
ttccaccatgaatacccctggatcctgagtgcttctgatgatcagacaatccgggtttgg
aactggcagtccagaacctgtgtttgcgtgctgacaggacacaaccactatgtgatgtgc
tcccagttccatccctctgaggacctggtggtgtctgccagcttggatcagactgtgcgc
gtttgggatatttctggcctaaggaagaagaacctgtctcctggagctgtggagtcggat
gtcaggggaattactggagtggatttgttcgggacgacagatgcggtggtgaaacatgtt
cttgagggacatgatcgtggggtgaactgggctgctttccaccccacaatgcctctcatt
gtgtctggtgctgatgatcggcaggtgaagatctggaggatgaatgaatcaaaggcctgg
gaggttgacacctgccgtggacactacaacaatgtctcctgtgctgtctttcacccacgg
caggagctgatcctcagcaattcagaagataagagcatccgtgtctgggatatgtctaaa
cgcacgggcgtccagaccttccgccgagatcacgatcgcttttgggtgttggctgctcac
cccaacctcaatctctttgctgcaggccacgatggcggcatgatagtgttcaagctggag
cgtgagcggcctgcctatgcagtgcatgggaacatgctgtattacgtgaaggaccgtttc
ctgcgccaactcgacttcaacagctccaaagacgttgctgtcatgcagctgagaagtggt
tccaagttcccagtgttcaacatgtcgtacaacccagctgagaatgctgtcctgctctgc
acgagagccagtaacctggagaacagcacctatgacctgtacaccatcccaaaggacgca
gactcccagaaccctgatgccccggaagggaagcgttcctctgggctgacagctgtgtgg
gtagctcgcaaccgctttgcagtcctggatcgcatgcattcgatcctaatcaagaacctg
aagaatgagattaccaagaaagtgcaggtcccgaactgtgatgagattttctacgctggc
actgggaacctgttactgagggatgcagactcgatcaccctctttgatgtgcaacagaaa
cgaacccaggcttctgtgaagatctccaaggtgaagtatgtcatctggtcagctgacatg
tcccatgtggctctgctggctaagcatgccatcatgatctgcaaccggaagctagagtcc
ctgtgtaacatccatgagaatatccgtgtcaagagcggtgcctgggatgagagtggtgtc
ttcatctacaccaccagcaaccacatcaaatacgctgtcaccacaggggatcacggaatc
atccgcactctggacctgcctatctatgtcacccgcgtgaaggggaacaacgtgtactgt
ctagacagggaatgccgacccagggtgctcaccatcgaccccacggagttcaagttcaag
ctggcgctgatcaataggaagtatgatgaggtgttgcacatggtgaggaacgccaagctg
gtgggccagtccatcatcgcctacctgcagaagaagggctaccccgaggtggcgctgcat
ttcgtaaaggatgagaagacccggttcagcctggcactggagtgtggcaatatcgagatc
gctctggaggcagccaaggctctggatgacaagaattgttgggagaagctgggggaggtg
gccttgctgcagggaaaccatcagatcgtggagatgtgctaccagcgcaccaagaacttc
gacaggctctccttcctgtacctcatcacgggcaacctggagaagctccgcaagatgatg
aagatagctgagatccgtaaagacatgagtggccactatcagaatgccctgtacctcgga
gatgtagcagagagggtgaggatcctgaagaactgcgggcagaagtccctggcctatctc
accgctgcaacccatggcttggatgaagaagccgagagtctgaaggagacgtttgaccca
gaaaaggaaacgattccagacattgaccccaatgcaaagctgctccagccccctgctgcc
atcatgcctctggacactaactggccattgctcactgtctccaagggattctttgaagga
acaattgctagcaaaggcaaaggaggggcattggctgctgatattgatattgacacagtt
ggcactgaaggctggggagaggatgctgagctgcagctggatgaagatggctttgtggat
gccggggaaggctttggagacgaagcccttggtaaaggacaggaggaaggaggcggatgg
gaagttgaagaggatttggaccttccccctgagctggatgtccctgctggcctggcagga
ggagctgaggatggattctttgtgccacccaccaagggcaccagcccagctcaggtctgg
tgtaacaattcccagctgcctgttgatcacatcctgggtggttcctttgagacggccatg
cggctcctccacgaccaggtgggagtgactaattttggcccctacaagcagctcttcctg
cagacctatgcccggggccgcaccacttaccaagcactgccctgcctccccgccatgtat
ggatacccacatcgcaactggaaggacgccgggttgaagaatgccctccctgtcgtcggc
ctgaagctcaacgacctgatccagcgcctgcaagtctgctaccagctgaccacagctggc
aagttcgaggaggcggtggagaagttccgctccatcctgctgagcgtgccgctgctcgta
gtggataacaagcaggagatcgctgaggcccagcagctgattgccatctgccgagagtac
atcgtggggctgtcgatggagatcgagaggaagaagctccccaaagagaccctggagcag
cagaaacgcacctgcgagatggcagcctacttcacccactccaacctgcagcccgtccac
atgatccttgtgctgcgcaccgccctcaatctcttctttaagctcaaaaacttcaagaca
gctgccaccttcgctcgccggctcctggagctgggccccaagcccgaagtgtcgcagcag
acgcgcaagatcctgtccgcctgcgagaagaaccccaccgacacctaccagctcaactac
gacatgcacaaccccttcgacatctgcgccgcctcctaccggcccatctaccgcggcaag
ccggtggagaagtgcccgctcagcggtgcctgctactgccctgagttccgggggcaggtc
tgccgagtcaccacggtgacagagatcggcaaagacgtcattgggctgcgaatcagccca
ctccagttccgctaa

DBGET integrated database retrieval system