Chelonia mydas (green sea turtle): 102944221
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Entry
102944221 CDS
T02989
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102944221 (TRPA1)
Ion channels [BR:
cmy04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102944221 (TRPA1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
ANK_LRRK2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102944221
NCBI-ProteinID:
XP_037748377
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Position
2:56586326..56646920
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AA seq
1114 aa
AA seq
DB search
MKRALLRMFQTRDKAACGSYEGVVCEADAASLASQDVFKVISDGSACRLRSLIKKNRSGL
SKLDELKATPLHHAAGGGHIELMEMILDDSSNEALNVMDSSGNTPLHWATKKNQVESVKL
LLSRGANPNILNSSMMAPLHLAVQCLHNEIVKVLVQHSSTDVNLEGETGNTPIIVACYKE
NPEALTLLLENGGKLCKSNKTGCMPVHAAAFSGAKACMEIILKKGEELGHSTESHINFTN
NGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSYS
GDESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASWK
IVNLLLSKGANISLKDQLGRNFLHLTVLQPGGLQRLDEKFLQMKHIKDLVVEEDDKGCTP
LHYACRQGVPFSVNSLLDLNVSVYSKSRDKKSPLHFAASYGRINTCQRLLRDMNDTRLLN
EGDKKGMTPLHLAAQNGHEKVVQFLLKKGALFLCDYKGWTALHHAAFGGYTRTMQIILDT
NVKSTDRVDEEGNTALHLAAKEGHAKAVRLLLDDGAKIILNKASASFFHEAIHKRHKDVV
SAVILNKRWEEAVTTFSHSSTANKCPLLEMVEYVPESLKLVLDNCMIESSEEKTGQDFCI
EYNFRYLQCPLILNKKVKADEEIVYEPLTTLNAMVRHNRMELLNHPVCKEYLLMKWMAYG
FRAHIMNLSVYSLGLIPLTLLITRIRPGISSNATETHQTGPLEYEDSYFIRVCMCLVFTM
SLFGICKEIFQLFQQKLKYLLDYSNLLDWIIYTSSIIFVSSLFVNIPAHLQWECGAISVY
LSWMNFLLYLQRFENYGIYIVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLCSQEHYKT
PFLSVMQTFAMMLGDINYHEAFLDPLLSDNLPYPFLSYAVLIVFTLLIPILLMNLLIGLA
VGDIAEVQKYAALKRIAMQVNLHTNLEKKLPYWFLSRVDQESITVYPNRPRYCGFMSVFN
YCFGFEDSVTDAQSADTTLELEILKQKYRLKDMSTLLEKQHELIKLIIQKMEIVSEAEDE
DSNDLFQHKFRKQQLERMNSKWDTVLKAVKSKCP
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgccctgctgaggatgttccagacgcgggacaaggcggcgtgcggctcctac
gagggggtcgtgtgcgaggccgatgccgcctccctcgcctcgcaggacgtctttaaggtg
atttcagatggaagtgcttgcagattacggagtttaattaagaaaaatcgttctgggctt
agcaaattggatgaactgaaggccactccattgcatcatgctgcaggaggaggtcacata
gaattaatggagatgattttagatgattcttccaatgaagcgctaaatgtgatggactcc
tctggaaacaccccattgcactgggccacaaaaaaaaaccaggttgaaagtgttaaatta
cttctcagcagaggcgctaacccaaacattctaaactccagtatgatggcacctcttcat
ctagctgtgcagtgccttcacaatgaaatagttaaggtgttggtccaacacagcagtaca
gatgttaatctggaaggagaaactggcaacacacctataatagtagcatgttacaaagaa
aatcctgaggcactgacgcttctgcttgaaaatggaggaaagttatgtaaatcaaacaaa
actggatgtatgcctgtccatgcagctgccttttcaggtgcaaaagcatgcatggaaatt
attttaaaaaaaggtgaagagttaggtcattctactgaaagtcacatcaattttaccaat
aatggaaagtgcagtcctctccatctggcagttcagagtggagacttggaaatgattaaa
atgtgcatcgaatttggagcacagattgatctgaaacagaatgaaaaatgcacagctctt
cattttgctgccacccaaggagcaactgagattgttaaattaatgatgtcatcgtattct
ggtgatgaatctattattgatgcagtagatgggaataaggaaacactgcttcacaggact
gcattatttgatcactatgaactggcagagtatttaatttcaatgggagcaaatattgat
agtgttgacattgagggtcggtcaccacttctgctggctacttcctgtgcatcatggaaa
attgtgaatttactactctcaaaaggagcaaatatctctctaaaagatcagcttggtcgg
aatttcttgcacttgacagtactgcagcctggaggattacaacgtctggatgagaaattt
ctgcagatgaaacatattaaagatcttgtagtggaagaagatgacaaggggtgcactcca
ctacattatgcatgcagacaaggagtgcccttctctgtaaatagcttgctcgacttgaat
gtttctgtctattctaaaagtagagacaagaagtctccattgcattttgcagccagctat
gggcgcatcaacacctgtcagcgacttctcagagacatgaatgacacaaggcttttgaat
gaaggtgataagaagggaatgactccccttcacttggcagcccaaaatggtcatgaaaag
gttgtccaatttctactgaagaagggtgccctcttcctgtgtgattataaaggctggaca
gccctgcaccatgctgccttcggaggatacactcgcacaatgcaaataattttggatact
aatgtaaaatctacggacagagtggatgaagaagggaacacagctcttcatcttgctgca
aaagaagggcacgcgaaagcagtgagactgcttcttgatgatggtgccaaaataatcttg
aacaaagcatcagcctcttttttccatgaagcgatacacaagaggcataaagatgtagtg
tctgctgtcattctgaataaaagatgggaagaagctgtgacaacattttctcactcttct
actgccaataagtgtcctttgttggaaatggttgaatatgtacctgaatcgttaaagttg
gttttggacaactgtatgattgagtcttcagaggaaaagacaggtcaagacttctgtatt
gaatataacttcaggtatctccagtgtccactaatacttaacaaaaaagtaaaggcagat
gaagaaattgtctatgaaccgcttaccactctaaatgctatggtacgtcataatcgcatg
gagcttctcaatcatcctgtatgtaaagaatatttgctcatgaagtggatggcctatggg
ttccgagcacatattatgaacctcagtgtgtattctcttggtctcattcctctgactctt
ctgatcacccgcatacgaccaggaatatcttccaatgcaacagaaacccatcaaacagga
ccattagagtatgaggattcatacttcataagagtatgtatgtgtttagtttttaccatg
agtttatttggaatctgcaaagagatatttcagctctttcaacagaaattgaagtacctg
ttggattactctaatctattagactggataatttatacctcaagcataatttttgtgtct
tccttatttgttaatatcccagctcacctgcagtgggaatgtggagcaatttctgtatat
ttatcttggatgaacttcttgctttatcttcaaagatttgaaaactatggaatctacatt
gtaatgttctgggaaattctgaggactttgattcggattgctgttgtgttctttttcctg
atattggcctttggactcagcttctttgtccttctgtgttcacaggaacattacaagact
ccgttcctttctgtaatgcagacatttgctatgatgctgggagatattaattatcatgaa
gctttccttgatccgctgctaagtgataatttgccctatccattcctgagttatgcagtt
ctcattgtcttcaccttgcttattccaattcttcttatgaacttgctgattggtttggct
gttggagacattgctgaggtgcaaaaatatgctgcactgaaaaggattgcaatgcaggtc
aatcttcacacaaatttagagaagaagctgccatattggttcctaagtcgggtggaccag
gaatcaatcactgtgtatcctaataggccaagatactgtggatttatgagcgtgttcaat
tattgctttggttttgaagactctgtcacagatgctcagagtgctgacacaactttagaa
ctggaaattttgaagcagaaatacaggcttaaggatatgtcaacgctcttggaaaaacag
catgagctcattaaactgatcatacaaaaaatggagatagtatcagaggctgaggatgaa
gacagtaatgatttatttcagcataagtttaggaaacagcagttagaacgcatgaacagt
aaatgggatactgtgttaaaagctgtaaaatcaaaatgtccctag
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