Chelonia mydas (green sea turtle): 102944258
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Entry
102944258 CDS
T02989
Symbol
MYOF
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102944258 (MYOF)
Membrane trafficking [BR:
cmy04131
]
Endosome - Lysosome transport
Others
Ferlins
102944258 (MYOF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
NagJ_C
Motif
Other DBs
NCBI-GeneID:
102944258
NCBI-ProteinID:
XP_027675181
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All DBs
Position
7:91920311..92035659
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AA seq
2060 aa
AA seq
DB search
MLRVIVESATNIPKTKFGKPDPIVSVIFKDEKKKTKKIDSELSPVWNEILEFDLKGIALD
ISSSLTIIVKDFETIGQNKLIGNASVALKELVGNQSRSLPFKLISLLNERGENIGATIDL
VVGYEPPAGPANPNDPGGTNAQGTEDGEEDGGYEDGADGTVDGIAPAVPSDTKEAQLARR
ISKGKKMRRILSNKPQDFQIRVRVIEGRQLSGNNIKPVVKVHICGQTHRTRIKRGNNPYF
DEMFFYNVHMTPLELLDETISIRVYDSYSLRADSLMGEFKIDIGYVYDEPGHAVMRKWLL
LSDPEDTNSGTKGYLKVSMFVLGAGDEPPMEKRERDNESDDVESNLLLPAGIALRWVTFL
LKIYRAEDIPQMDDAFAQTVKELFGGDADKKNLVDPFVEVCFAGKKVCTNIVEKNANPEW
NQVVHLQIKFPSMCEKIRLTVFDWDRLTKNDAVGTTYLSLSKIAASGGEVEEFSSSGTGA
SSYEVNTGETEVGFLPTFGPCYVNLYGSPREYTGFPDPYDELNSGKEEGVAYRGRILVEL
STILDSKSVNKKIEAISSDDALVVEKYQRRRKFSLSAVFHSATMLQDIGEAIQFEVSIGN
YGNKFDTTCKPLASTTQYSRAVFDGNYYYYLPWVNTKPVVTLTSFWEDISHRLDPVNLIL
TMVERLQSNIAALKSGIQAKVSENQLAEIWLKLIDELVEDTSKPLPLLEGKSNVTVLDTQ
IQKLRLKSLKHILEAATRMRNDATDVKATLAEIEDWLDKLMQLTEEPQNSIPDVIIWMIR
GEKRLAYARIPAHQVLYSTASTEASGKYCGKTQTIFLKYPQDKNKGAKIPVQLRVNIWLG
LTAAEKKFNSFAEGTFSVSAEMYENQALMFGKWGTSGLVGRHKFSDVTGKIKLKREFFLP
PKGWEWEGEWMVDPERSLLTEADAGHSEFTDEVYQNESRYPGGEWKAAEEPYTDVNGEKT
APPGEITCPPGWIWEDDAWIYDINRAVDEKGWEYGITIPPDNKPKSWVAAEKMYHIHRRR
RLVRKRKKDPSQVTTGVKAMASHEDKEGWEYASLIGWKFHWKQRSSDTFRRRRWRRKMSP
SETHGAAAIFKLEGALGADTSLDDGEGKSSEKDKESATRVFGANTPIVSCSFDRVYSYHL
RCYIYQARNLIALDKDSFSDPYAHVSFLHQSKTTEIIHSTLNPTWDQTLIFNEIEIYGDP
QTVAKNPPNVVIELFDNDQVGKDEFLGRSVCSPMVKLNPEVDITPKLLWYPVMNGGKACG
DILFDAELILRDKDGSNLPILPSQRAPKLYMVPQGIRPVVQLTAIEILAWGLRNMKNYQM
ASITSPSLIVECGGEMVESVVIKNLKKTPNFPYSVLFMKVLLPKEELYTPSLVIKVIDHR
QFGRKPVVGQCTIDSLEDFRCDPYATKEDIAPQLKVSLLSAVPRRDVVIEMEDTKPLLAA
QLTEKEEETVDWWSKFYASTGEHEKCGQYIQKGYDTLKVYDCELENVPEFKHLTDFCDTF
KLYRGKSEDNDDPSVVGEFKGSFRIYPLSDDPAVPVPPRQFRELPESGSQECIVRIYIVR
ALALQPQDNNGLCDSYIKITLSKKVIEDRDHYVPNTLNPDFGRMYELSCFLPQEKDLKIS
VYDYDVLTRDEKVGETIIDLENRFLSRFGAHCGIPQQYCISGVNTWRDQLKPTHMLQNIA
RFKGYSPPILSENGSRINYGGRDYTLEEFETNKKLHQHLGPTEERLALHILRTQGLVPEH
VESRTLYSTFQPNISQGKLQMWVDVFPKSLGPPGPPFNINPRKAKKYIMRVIIWNTKDVI
LDEKSITGEEMSDIYVKGWMPGNEENKQKTDVHYRSLDGEGNFNWRFIFPFEYLSAEQLC
KVSKKEHFWSLDKTEFRIPPKVIIQIWDNDKFSLDDYLGFVELDLHNTVIPAKVPEKCSI
DMIPEYKANNPLKAPKTVSLFEQKSMKGWWPCYKEKDGSRVLAGKVEMTLEVLNEKEADE
RPAGKGRDEPNMNPKLDLPNRPETSFLWFTNPCKTMKFIVWRRFKWIFIGIIILLIVLLF
VAILLYSLPNYISMKIVNPI
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgggtgattgtggaatctgctaccaatatccctaaaactaaatttggaaaaccg
gatcctattgtttctgttatttttaaagatgaaaaaaagaaaacaaagaaaattgatagt
gaactcagccctgtttggaacgagattcttgaatttgatttgaaagggatagcactcgat
atttcatcatccctgaccattattgtgaaagattttgaaacaattggacaaaacaaatta
attggaaatgcatcagtagcacttaaggaacttgtaggcaaccagagtaggtctcttccc
ttcaagcttatttccctgctaaatgaaaggggagagaacattggcgcaacgattgattta
gtggtaggatatgagccaccagctgggcctgcaaatccaaatgatccaggggggaccaat
gcacaaggcactgaagatggagaagaagatggaggttatgaggatggggctgatggtaca
gttgatggcattgcaccagcagttccaagtgacacaaaggaagcccagcttgctcggcgc
atctctaaaggaaagaaaatgcggagaatcctttctaacaaaccccaagacttccagatt
cgtgttagagtcattgaaggtcgtcagttgtctggaaataacataaaaccagtagtcaaa
gttcatatttgtgggcagacacaccgaacaagaatcaaaagaggaaacaatccatatttt
gatgagatgttcttctacaatgttcacatgacccctttagagctgcttgatgaaacaata
agcattcgggtgtatgattcttattctttacgagcggactctctgatgggagaatttaag
attgacattgggtatgtttatgatgaacctggccatgcagtcatgagaaaatggcttctt
ttgagtgaccctgaagatacaaattcaggaactaaaggctatctgaaagtcagcatgttc
gtcctgggggcaggagatgagccaccaatggaaaaaagagagcgagataatgaaagtgat
gatgtggagagtaatcttttactgccggctggaattgcacttcgatgggtcaccttcctt
cttaaaatctacagagccgaggatattccccagatggatgatgcttttgcgcagactgtt
aaggaactatttggaggtgatgcagacaagaaaaacctagtagatccatttgtggaagtt
tgttttgctggaaaaaaggtttgcacaaatatagttgagaaaaatgctaatccagaatgg
aatcaagttgttcatcttcaaatcaagtttccctcaatgtgtgaaaaaataagattaaca
gtttttgactgggatcgtcttacaaaaaatgatgcagtaggaacaacgtatttaagtctc
tccaaaattgctgcttctggtggagaagtagaagaattttcatcttcgggaactggggct
tcatcgtatgaagtaaacacaggggaaacagaggtgggctttttaccaacatttgggccc
tgttacgtaaacctttatggaagcccaagagaatacactggattcccggacccctatgat
gaactaaactctggaaaggaggaaggagttgcttatagaggcagaatcttagttgaacta
tctacaatacttgacagtaaatctgtgaataaaaagatagaggcgatctccagtgatgac
gcactggttgttgagaaatatcagcgcagacgaaaattcagtctgtcggctgtgtttcat
tctgctaccatgctgcaagatattggtgaggctatccagtttgaggttagcattggtaat
tatgggaacaagtttgacaccacctgtaagcctttggcatcaacaactcaatacagccgt
gctgtatttgatggtaactactattattacctgccatgggtgaacacaaagccagtagtg
acactgacttccttttgggaggacataagtcatagactagacccggtgaacctaatccta
accatggttgaaagactgcaatccaacatagctgccctaaaatcaggaatacaggctaaa
gtttctgaaaaccagttggcagagatatggctgaagctgatagatgaacttgtagaagat
acaagtaagccattacccctcttagaaggcaaatccaatgtcacagtccttgacacacag
atacaaaaactgcgcctcaagtctctcaaacacattctagaggcagcaacaaggatgaga
aatgacgctaccgatgtgaaggccactttggcagaaattgaagactggttggataaatta
atgcaattgaccgaagagccacaaaacagtatacctgatgtgatcatctggatgatccgg
ggagagaagagactagcttatgcccgcattcccgcacaccaggttttgtattctactgca
agtactgaagcatctggtaaatactgtggaaagacccagaccatctttctaaagtaccca
caggacaagaacaaaggtgccaaaattccagtgcagttgcgagttaacatttggcttggg
ttgactgcagctgaaaaaaagtttaatagctttgcagaaggaacattcagtgtttctgca
gaaatgtatgaaaatcaggctcttatgtttggaaagtggggcacctcaggactagttggt
cgccacaagttttctgatgtcacaggaaaaattaaattgaaaagagagttctttttgccc
ccaaagggctgggaatgggaaggagaatggatggttgatcctgaaagaagtttgctgact
gaagctgatgcaggtcatagtgagtttacagatgaagtgtaccaaaatgagagtcgttat
cctggaggagaatggaaagcagctgaggagccctacacagatgtgaatggagaaaaaact
gcaccacctggtgagattacctgtccccctggatggatctgggaagatgatgcttggata
tatgatataaatcgagcggtggacgagaaagggtgggaatatggaattaccattcctcca
gacaacaaaccaaagtcctgggttgctgcagagaaaatgtatcatatacacagacggcga
agactggtgcgaaaacgcaaaaaggatccaagccaagtaacaacaggagtaaaggcaatg
gcatcccatgaagataaagaaggatgggaatatgcatctttgattggctggaagtttcac
tggaaacaacgcagttctgacactttccgccgtagacgctggaggagaaaaatgtctcct
tccgagacacatggtgcagcagctatctttaaacttgaaggtgctcttggagcagacaca
agcctcgatgatggagaggggaagagctcagaaaaagacaaggagtctgccacacgtgta
tttggtgccaacactccaattgtttcctgcagttttgacagagtgtatagttaccacctt
cgctgctacatctatcaggcaagaaatcttattgctttagacaaagacagcttttcagat
ccatatgctcatgtttcattcctccatcaaagcaaaacaactgagatcatccattcaact
ctgaatcctacatgggaccaaacgcttatatttaatgaaattgaaatctatggagaccca
cagacagtagcaaaaaatccacctaatgtggttattgaactttttgacaatgaccaagtg
ggcaaagatgagtttctaggaagaagtgtttgctctcctatggtaaagctaaacccagaa
gtggatatcacacctaagcttctctggtaccccgtaatgaatggaggtaaagcttgtggg
gacatccttttcgatgctgagcttattctgagggacaaggatggctccaaccttccaatt
cttccatcacaaagagcaccaaagctttacatggtacctcaaggaattagacctgttgtt
cagctcactgctattgagattcttgcctgggggttacgaaacatgaaaaactaccaaatg
gcttctattacttctccaagtctcattgtagagtgtggtggtgaaatggtggagtctgta
gtgatcaaaaacctcaaaaagacaccaaattttccatattctgttctcttcatgaaagtg
cttttgcccaaagaggagctatacactccatcactagttattaaagtgatagaccacaga
cagttcggacggaaaccagttgtgggacagtgtaccattgattccctggaagactttcgc
tgtgacccctacgctactaaagaagacattgcaccacaactaaaagttagcctcctgtct
gctgtgcctcgtcgggatgtggtcattgaaatggaagacacaaagccactactagcagct
cagcttacagaaaaggaagaagaaactgttgattggtggagcaaattttatgcttcaaca
ggagagcatgaaaaatgtggacaatatattcaaaaaggatatgacactttaaaggtgtat
gattgtgaattggagaatgtacctgaatttaagcacctgacagacttctgtgatacattt
aagctgtacagaggcaaatcagaggacaatgatgacccttcagtggtaggagaatttaag
ggttcctttagaatctatccattatcagatgatcctgctgtaccagttcctcctcgtcaa
ttccgtgagttaccagagagtggatctcaggagtgcattgtgcgaatttatatcgttaga
gccttagctctccaaccccaggataacaatgggctgtgtgattcttatataaaaataacc
ttaagtaaaaaagtaattgaagacagggatcattatgttcccaatactctcaacccagat
tttggcagaatgtatgaactcagctgcttcttgcctcaagagaaggatctgaaaatttca
gtctatgattatgatgtactgactcgtgatgaaaaagttggtgaaaccatcattgatctt
gagaacagattcctttctcgctttggagctcattgtggcataccacagcagtattgcatt
tcaggtgtaaatacctggcgagatcaactgaaaccaacacacatgttgcaaaatatagcc
aggtttaaaggctactctcctcctatcctctcagaaaatggaagcaggattaactatgga
ggacgagactacaccttggaggaatttgagactaacaaaaaattgcatcagcaccttggg
ccgactgaagagcgtctagcccttcatatccttagaacccagggcttggtccctgaacat
gtggagtcaaggaccttatacagcaccttccagcccaacatctcacaaggaaagcttcag
atgtgggtggatgttttccccaaaagcttgggacctcctggccctcccttcaacatcaat
ccccgcaaagccaagaagtacatcatgcgggtgattatttggaacacaaaggatgtcatt
ctggacgaaaaaagtatcacgggggaagaaatgagtgacatctatgtgaaaggctggatg
cctggcaatgaagaaaataagcagaaaacagatgtgcactataggtcactggatggtgaa
gggaattttaactggagatttattttcccttttgaatatctttcagctgagcaactctgt
aaggtctctaaaaaggagcatttttggagtctcgacaaaacagaattcagaatcccaccc
aaagtgatcattcagatatgggataatgacaagttctccttggatgactacctaggtttt
gttgaacttgatttacacaacacagttattccagcaaaagttcctgaaaaatgcagcata
gacatgattccagaatacaaggcaaacaaccctctcaaggctcccaagactgtctcactc
ttcgaacagaaatccatgaaggggtggtggccatgttacaaagaaaaggacggctcgcgt
gttttggcaggtaaagttgagatgactctggaagtcctcaacgaaaaagaggctgatgag
aggccagctggtaaaggaagagatgaacccaacatgaaccccaagttagacctaccaaac
cgaccagaaacttccttcctttggttcacaaatccatgcaagacaatgaaatttattgtg
tggcgcagatttaaatggatcttcataggcattatcatcctcctgattgtactcttgttt
gtggcgatactcttatattcactgccgaattatatatcaatgaagattgtgaacccaatc
taa
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