Chelonia mydas (green sea turtle): 102944296
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Entry
102944296 CDS
T02989
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X2
KO
K13338
peroxin-1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
102944296 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102944296 (PEX1)
Membrane trafficking [BR:
cmy04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
102944296 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
RuvB_N
ABC_tran
AAA_18
RNA_helicase
AAA_22
AAA_33
DUF815
TIP49
AAA_28
AAA_5
Sigma54_activat
NACHT
AAA_29
DUF5906
AAA_24
AAA_7
AAA_19
Sigma54_activ_2
Zeta_toxin
APS_kinase
Vps4_C
DUF87
ATPase_2
Bac_DnaA
Parvo_NS1
HMG_WDHD1
NTPase_1
KTI12
Viral_helicase1
AAA_23
T2SSE
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
102944296
NCBI-ProteinID:
XP_007060360
LinkDB
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Position
2:217065488..217117552
Genome browser
AA seq
1292 aa
AA seq
DB search
MWGSGYPGGGGAGGAAVTVAFSGTRDCFLHLPPVLASHLRLQQGQAVKVSWGHQPIFLSW
MEIRHCGHHGENIAEINRHLAEKLGIAEGEQIFLEPCSQALSCQQVEVEPLSADDWEILE
LHASSLERHLLDQIRIVFPKAIFPVWVEQNTHIYIRIGTLKPPASYGRLEPRTQLFVCPK
TRQLEENTTNLPSSKSDSLHERFIKSNMDQGEIIKEPLAKEPHLNPGVLEQCKPDAKETF
GSNVLPNVWNFIGSIFSHSPEQKQISCGMSEMSAFKDELLNLIHMDSIFRVCQSQPPSVQ
STSATKAFQKNTVHVFPWNLEFVDLDPNIKVSYGKISKLRSPRQRHREAKQNLPFEKQKQ
MSSTEDRNQYGSNISQESSEMSVVRIVWNGFEDLESAIKYNSSVEAMHVGRVWIPDGLRK
RIHIEMHATVRIKSMESVPKIPASLRLQPKRNLHKDISEDDIKSAFSLWLEDTTTVDLPW
IMTDTHRIQLVVKEGMEEFVLSVVHPSHTEENKSENIFMLGPNLLQKTNIQVLIHAMPTK
ADDDNTQSTIHDTDQILPFHKLNSLGGVGKLGTSSFEHITHSLLGRPLSQKLVTIAVGLR
SGAVLLTGAKGSGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLENIRKKVEEVFLEA
AWRQPSILLMDDLDHIVGVPSTPEHENSPEAVQSYRLAYVLKDVIKEVISMGSLIALIAT
SQSEHSLHPSLVSGQGTHVFQCFKHIQPPDQEQRCELLHSIIENKLNSDINRFYDLDLQH
IAKETEGFIARDFTMLVDRAIHSCVSNKGACNKEDLNLSTLDFQKALKHFTPSSLRNVNL
HKPKDLGWDRIGGLKDVQQILMDTIQLPTKYPGLFANLPIRQRTGILLYGAPGTGKTLLA
GVIARESGMNFISIKGPELLSKYIGASEQAIRDVFNRAQAAKPCLVFFDEFDSIAPRRGH
DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQT
SRFEILKALSHSLPLANDVDFQHLAAKTEHFTGADLKALLYNAQLEAIHASLGSSLPQDI
GSSSDSDLSLSSMVFLNHSSGSDDSAGDVEGGLEQSLISLEMSELFPEDSRSNIYRLYFG
SSYESELGNGTPSELSSQCLSGPNSITHDLTGITLRDIVSSQPSVLRTASQEGFQELNQE
QREQLRAEINAIKANYRSKNGEDVAPSQSGLTKNTLIISQSHLMTALEDTRPSVSQDDWK
NFVELYENFQHPKKKKGQNGATFRPGQKVTLA
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagcggctatcccggcggagggggcgcgggaggcgccgctgtgactgtcgcc
ttcagcggcacccgggactgcttcctgcacctgcctcctgtgctggcctcccaccttcgc
ctgcagcagggtcaggctgtgaaagtctcctggggtcaccagcctatattcttgagttgg
atggaaatcagacattgtggtcaccatggtgaaaatattgctgaaattaacagacaccta
gcagagaaacttggcattgcagaaggagagcagatattccttgagccatgctcccaagcc
ttatcctgtcagcaagtagaagtggaacccctctctgcagatgattgggaaatactggag
ctgcatgcttcctctcttgaaagacatcttcttgaccagattcgaatagtatttccaaaa
gccatcttcccagtgtgggttgagcagaatactcatatttacattcgaattggtacacta
aagccacctgcttcttatgggagactagaacctcgcacacagctttttgtatgtccaaaa
acacgccagcttgaagaaaacaccaccaatctgccttcctcaaaaagtgactctttacat
gaaagatttattaaaagtaacatggatcaaggagaaataataaaggaacctttggccaaa
gaacctcatttaaatccaggtgtccttgaacagtgtaagccagatgcaaaagagacattt
ggctcaaatgtcctgccaaacgtatggaattttatcgggagcattttctctcactctcct
gagcagaaacagatttcctgtggtatgagtgaaatgagtgcattcaaagatgagctatta
aacttgattcatatggactctattttcagagtatgtcagtcccagcctcctagtgtacag
agcacatcagccacaaaggcatttcagaaaaatactgttcatgtttttccatggaatctg
gagtttgttgatctagatcccaatattaaagtgtcttatgggaagatcagtaagcttcgc
tccccaagacaacgccatcgagaagcaaagcagaatctaccgtttgagaagcaaaagcaa
atgtccagcacagaagacagaaaccagtatggctctaatatcagtcaagaatccagtgag
atgtctgtcgtgcggatagtatggaatggatttgaagacctagagagtgccataaaatat
aacagcagtgtggaagccatgcatgttggaagagtttggattccagatggcctgagaaag
agaatacatatagaaatgcatgcaacggtcagaattaagtcaatggaatcagtccctaaa
attccagcatctcttagattacaacccaaaaggaatttacataaagacataagtgaagat
gacataaaatctgcttttagtttatggttggaggataccactactgttgatcttccctgg
ataatgacagacacgcatcgtatacaactagttgttaaagaaggaatggaagagtttgtc
cttagtgtggtacatccttctcacactgaagaaaataaatcggagaatatttttatgttg
ggtcccaatttgctgcagaagacaaatatacaagttcttatacatgctatgcctacaaag
gctgatgatgacaacacacagtctactatacatgatactgaccagatccttcctttccac
aaactaaacagtttaggaggagtgggtaaactaggaacatcctcctttgagcacataacc
cacagcctcttgggacgccctttatctcaaaagctagttaccatagctgtgggactgcgc
agtggagctgtcctgctcacaggagcaaagggaagtggaaagtcaacattagcgaaggcc
atctgcaaagaagcctttgatagattggatgctcatgtggaagtaattgactgtaaggct
ttaagaggaaaaagattagaaaacatacgaaaaaaagtggaggaagtttttctagaggca
gcatggagacagccatccattcttctgatggatgatcttgatcacattgttggagttcct
tctacaccagagcatgagaacagccctgaagcagttcagagctatagacttgcatatgtt
ctgaaagatgtgataaaagaagttatttccatgggcagtttgattgcattaattgccaca
agccaatctgaacattctctgcatccttcccttgtttctggtcaaggaactcatgtattt
cagtgcttcaaacatatccagcctccagatcaggagcaaagatgtgaattactgcattcc
ataatagaaaataaattgaactccgatataaacagattctatgatcttgatctccagcac
attgcaaaggaaacagaagggtttatagctagagactttacaatgctagtggatcgcgcc
atacactcctgtgtttctaataagggagcgtgcaacaaggaagacttgaatctgtcaacc
ttagactttcaaaaagctttaaaacattttactccttcatctctgagaaatgttaaccta
cacaaacctaaagacttgggctgggacaggattggtggcttaaaggatgtacagcaaata
ctcatggataccatccagttacccacaaagtatccaggattatttgcaaacttgccaata
cgacagaggacaggaattttgttgtatggtgctcctggaacaggaaaaactctattagca
ggtgtaattgcccgagagagtggaatgaattttatcagcatcaagggaccagagctcctc
agtaaatatattggagcaagtgagcaagctattcgagatgtctttaacagagcacaggca
gccaagccttgtttagttttctttgatgagtttgattccattgcccctcgacgaggtcat
gataatactggagtgacagaccgagtggttaaccaactgttgactcagctagatggagta
gaaggcttacaaggggtttatgtgttggctgctactagtcgtcctgatttgattgaccct
gctctgttgaggccaggtcgactggataaatgcctgtactgtcctcctcctgatcagact
tctcgttttgaaatcctaaaagccctcagtcattctctgcctttggcaaatgatgtggac
tttcagcatttggcagcaaaaacagagcacttcacaggagctgatctaaaagctttactg
tacaatgcccagttagaagcaatacatgctagcttgggttcaagtttaccacaagatatc
ggttctagctcagacagtgacctcagtctctcttctatggttttcttaaaccatagcagt
ggttcagatgattcagcaggagatgtagaaggagggttggagcagtctcttatttcccta
gagatgtccgagttgtttcctgaagattcaaggtccaacatttatcgtctatactttgga
agctcctatgaatcagagctaggaaatggaactccttcagaactgagctctcagtgtttg
tctggaccaaactccataacccatgatttaactggcattactttgagagatatagtatcg
tcacaaccctctgtgctcagaaccgcctcacaagaaggtttccaagaacttaatcaggaa
caaagagagcaactcagggctgaaatcaatgcaatcaaggccaattacaggagcaagaat
ggagaggatgttgcccctagccaatcaggattaaccaagaacactttaattattagtcag
tcccacctaatgactgcacttgaggacacaaggccatctgtaagtcaagatgactggaag
aattttgttgaactctatgagaattttcagcatcccaagaagaagaaagggcagaatgga
gcaactttcagaccaggacaaaaagtgactttagcgtaa
DBGET
integrated database retrieval system
