Chelonia mydas (green sea turtle): 102944468
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Entry
102944468 CDS
T02989
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102944468 (NPAS1)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102944468 (NPAS1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
PAS_9
HLH
SIS_2
Motif
Other DBs
NCBI-GeneID:
102944468
NCBI-ProteinID:
XP_037740586
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Position
23:complement(4544417..4644127)
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AA seq
878 aa
AA seq
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MAAPFGNEVKCVSVEWDFLQGLLVKNQPVPCLQALRKEKSRNAARSRRGKENFEFYELAK
MLPLPGAITSQLDKASIVRLTISYLKMRDFASHGEPPWGLRAEGSPPPGPAGKGPGRRNM
AALLTKLFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYI
HPGDHPEVAEQLGLKLPFDAVGSLPESQKPPGLTGASSSSSCSSSLNEASEPDPAGSHAP
PKHDALERSFFVRMKSTLTKRGLHVKTSGYKVIHVTGRLRPRLPSFSHAHSVLSRVLGLV
ALAHTLPPSTLSEVRIECHMFVFRVNMDLQIVYCESRISDYMDLCPSELVGKSCYQFIHG
EDVEGIRQSHLDLLKKGQVVTRYYRWLQKNGGFVWIQSCATISVNIKNPSEKNMVWVNYI
LSKPECKNTALDIFQLPGIPARQTDASDVSDLEPDFKESDHGPEQKQGNQFLPKAAGALA
KGYSRSTPDDGARCSMAENDASSPEMSYKDEDVSEGAGVSDAESRRRGPRSKRIKLEFQP
ESPPREASLVSTEESDSGSEEEPDLPPQPVALERRVNGYNMAAGRNAGPSQPCTSEFASV
IQTQRSYPLKTSTALSIKTEQSQAPKYDKAALWTYPSARDALHEGPPYTVSKALSLEKPI
LRQATSHLYVSIPDSVLTPPEMDSSGGLAKAPFSTSPRAMLPAPSAETLSPPLSGSPCEE
RATSTPFAPLVYPGEMEALQRFHAGNVVLPLVHQLGGHHGIASTTGSQSLYTTSTIRYAP
ADVTLAVPGNVLPASHAINLMDIGSVESKASMELMYHHIQRLNMVAPFGNSASATGLAQI
SGAAGGVFTAAESLFSTLPFSMASGGIHSLSAAERKED
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccgttcggcaatgaggtgaagtgcgttagcgtagaatgggacttcttgcaa
ggactgttggttaagaatcagccagtgccctgtctgcaggccctgcggaaggagaagtcc
cgcaatgccgcccgctcccggcgcggcaaggagaatttcgagttctacgagctggccaag
atgctgcccctgcctggcgccatcaccagccagctggacaaagcctccatcgtccgcctc
accatcagttacctcaagatgcgcgacttcgccagccatggtgagcccccgtgggggctg
cgggccgaagggagccccccgcccggccccgccggcaaaggtcctggcaggaggaacatg
gcagctctgctgaccaagctctttgaacagcatctgggaggacacattttgcagtctctg
gacgggtttgtgtttgcactaaaccaagaggggaagtttctttacatctccgagacggtg
tctatttacctcgggctctcgcaggtggagctgacgggcagcagcgtctttgactacatc
catcctggagatcaccctgaggtcgccgagcaactggggctcaagctgcctttcgatgct
gtcggctccctgccagagagccagaaacctccaggcctcactggggccagctcttcctcc
tcctgctcctcctccctgaacgaggcctctgagcccgatcctgccggctcccacgcgccc
cccaagcatgacgccctggaacgatccttcttcgtccgtatgaaatccaccctgaccaag
agagggctgcacgtgaagacttctggctacaaggtgattcacgtcactggccgtctccgc
ccccgcctgccgtccttctcccacgcccattcggtcctcagccgagtcctggggctggtg
gccctggcccacacgttgccgccttccacgctcagcgaggtgcgcatcgagtgccacatg
tttgtgttccgggtcaacatggacctgcagatcgtgtactgcgagagcaggatcagcgat
tatatggacctatgcccctcggagctggtagggaaaagctgttaccagtttatccatggt
gaggatgtggaaggaatccggcagagccacctggacttgttgaaaaaaggccaggtcgtg
acccgatattaccgctggctgcagaagaacgggggctttgtgtggattcagtcgtgtgcc
accatctcggtcaatatcaagaaccccagcgagaagaatatggtctgggtcaattacatc
ctcagcaaacccgagtgtaagaacacggccctggacatcttccagctgcctgggattcca
gcccgacagaccgatgcctccgacgtgtccgacttggaacccgacttcaaagagagcgac
catgggccggaacagaagcaggggaaccagtttctgcccaaagcggctggggccttggcc
aaaggttactcccggagcaccccggatgatggagcccgttgctccatggcggagaacgat
gccagcagcccggaaatgagctacaaggatgaggacgtgtcggaaggcgctggggtgagc
gacgccgagagcaggcgcaggggtccccggagcaaacggatcaagctggagttccagccg
gagagccccccccgggaggcctcgctcgtcagcactgaggagtcagacagcggcagcgag
gaggaacctgatctcccgccccagccggtggcgctggagaggagggtgaacgggtacaat
atggcggcagggaggaacgcggggccgagccagccttgcacatcggagttcgcctccgtc
atccagacccagaggagctacccactgaaaaccagcacagcgcttagcattaagacagag
cagagccaggctcccaagtacgacaaggccgccctgtggacctacccctctgcccgggat
gccctccacgagggacccccctacactgtgagcaaagcacttagcctggagaagcccatt
ctgaggcaagccacttcccacttgtacgtctccatcccggactcagtcctcacccctccc
gagatggacagcagcggaggcctggccaaggcccccttcagcacatctccccgggctatg
ctgccggccccctcagctgaaacgctctcccccccgctctcgggctcaccgtgcgaggaa
agggccacgtcgacgcccttcgcccccctggtctatcctggcgagatggaggcgctccag
cggttccacgcggggaacgtggtcctcccgctggtgcaccagctcggcgggcaccacggc
atcgccagcaccaccggctcccagagcctctacaccaccagcactatccgatacgcccca
gctgacgtgaccctggctgtgccaggcaatgtgctgcctgcctcccatgcaatcaacctc
atggacatcggcagcgtggagtccaaggcctccatggaactcatgtaccaccacatccag
cggctcaacatggtggcgccgttcgggaactcagccagcgccaccggtttggcgcagatt
tcgggcgccgcggggggcgtcttcacagccgccgaatccttgttctctacgctgcccttc
tccatggccagcggcggcatccacagcctgtcagccgcagagcgcaaagaggactaa
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