Chelonia mydas (green sea turtle): 102944646
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Entry
102944646 CDS
T02989
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102944646 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cmy04091
]
102944646 (FREM2)
Lectins [BR:
cmy04091
]
C-Type lectins
Lecticans
102944646 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
102944646
NCBI-ProteinID:
XP_037748690
LinkDB
All DBs
Position
1:53391568..53604745
Genome browser
AA seq
3163 aa
AA seq
DB search
MQGSPAARTLLPALLLLLAGRGGGVRAQQPPPPGSPAFSYPSALGPPEDASIVVANRGLR
VPFGRSVWLDPLSDLVLQVQPGDRCHLRVLDDDPLWLRPGRLTPPRFPCDFGPGEVTYWH
LGSRSPSRDRVRLQLRYDSPSRAVVLPLALEVEVLFAQLEIVTRNLPLTVESLLGTSNAL
DGRSLEFAFQPGSQRCRVGALPGLGGLPRYGELLSPPAAPWHASAAGAPSPSLWWECEEF
LRLGLRYRHAAAGRSPNRDSLPLVVELREAAGAGALLKREHFQVLVRIRAGAENTPPRPS
FVAMLMMEVDQFVLTALTPDMLAAEDAESAPDLLLFNITSPFGPGQGHVVSTDDRSLPIA
SFSQRDVRELRVAYQPPAEDSARERLFELELEVLDPEGAASEPFAFMIVVKPMNTLAPVV
TRNTGLVLYEGQSRPLSGPGPSPSLLISDEDDLEQVRVSVLAGLRHGHLALLEEPLALLG
ESQARKHFTVAELMAGRIIYQHDGSESPLSDNLVLRLEDGGARHRVEFLFPITLVPTDDQ
PPLLNANTGLSLAEGDIAPIPARALSATDIDSDDATLRFVLESGPGAGQLLLRQAQPPLG
WEGENGGSPWRRVLGLPGDPPVYERLVSEWLQQDIVEGRLFYRHLGHPGPRVVLDQFVFR
VQDDNDPPNRSGPQSFVIRVHPVDRLAPVLHGGSSLRLVVAEQQVTPLRRKHLRYTDQDS
GDREIHYTVTQPPTDTDSNHPGGAKGTRLGSLVLTDDHSVEVMHFTQAQINHHKISYRPP
QQELGVAPRLAQFQYRVEDAAGNAAQGTFTIYLQPIDNQPPEITNSGFTVHEGGRHVLGL
AELDASDTDTDPTHLEFTLTQAPQHGQLQLSGHSLAMGAAFGLEDIKHGRVVYVHSGAES
HNDACSLDVTDGVHVVPITLKVTVHPVDDEVPTLRLPPGTLGSYLDVLENGAAEITTNVI
QGTDEDTDDLMLTFIVEDPPQHGDILVQGVPAERFSQRDVLDGAVVYAHTGGEIGLLPKE
DTFNLTLSDLSEEWSIGGNVVRGVSVLVTILPVDSQAPEVFVGEHLMVVEGDKRVITHAH
LRAEDVDTPSDDILCTIVAQPTSGYVENISPALGSEKSRAGTAISAFTLKDLRQGHIFYV
QSIHKGVEPVEDRFTFRCSDGINFSERHFFPIVIIPTNDEEPEIFMREFVVMEGMSLVID
TPILNAADGDIPADELTFTITKFPKHGHIVNQLINGTVLVESFTLDQITESSSIIYEHDD
SETKEDSFEVKLTDGKHAVEKTVLIMVIPVDDETPRMTINDGLEIEIGETKIIHNRILKA
TDLDSEDKTLTYVLRYGPGQGLLQRIKLSGGVENITLGMNFTQDEVDRNLIQYMHFGQEG
IRDLIKFDVTDGINPLIDRYFYVTIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSDL
NSPDENLVFSITRAPVRGHLECTDQSGMPITTFTQLQLAGNKIYYIHTSEDEVKMDSFEF
EVTDGYNPVFRTFRISISDVDNKKPVVTIHTLVVSESENKLITPFELTVEDRDTPDMLLK
FIITQVPVHGQLMFNNTKPVTSFTKQDLNENLISYKHDGTESAEDSFSFTVTDGTHTDFY
VFPDTVFETRKPQTMNIRIMAVDNSVPQIVVNKGAPSLRVLTTGHLGFMITNKVFKVEDR
DSLHITLKIRITEAPRHGFLIHLGKGNHSITQFTQADIDDMKICYVLREGDNATSDLFHF
TVEDGGGNKLKSQHFRLNWAWISLEKEYYLVNEDSKYLDVVLKRRGYLGETSFISISTKD
GTAEKDKDFKGKAQKQVQFNPGQTLATWRVRILSDGEHEQSETFQIVLSEPVMAVLEFPE
VATVEIIDPGDESTVFIPQSTYTIEEDIGELFIPVRRSGDVSQELMVICYTQQGTATGTV
PTSVLSYSDYISRPEDHNSILRFDKDEREKMCRIVIIDDSLYEEAETFDVLLSMPMGGRI
GSEFPGTQVTIVPDKDDEPAFYFGDVEYYVDESAGFVEVYVWRTGTDLSKAATVTVRSRK
TEPITAEAGVDYVGISRNLDFAPGVNMQTFRVIILDDLGQPVLEGIEKFELVLRMPMNAI
LGEPSKATIFINDSVSDLPKMQFKEPMYIGNENDEEISAMIYRSGDIRYTSTVRCYSRQG
SAQVMMDFEERPNTDDSIITFLPGETEKPCTLILVDDSLHEEEEELRLVLGTPRSDSSYG
ASIGEQNETLIRIRDHADKAIIKFGETKFSVSEPKDTGQLVVVKIPVLRLGDTSKVSIVR
VHTKDGSATSGEDYHPVSEEIEFKEGETQHIVEIEVLFDGVREMREAFTVHLKPDENMVA
EIQTAKAIVYIEEMNSMADVTFPSVPQVASLLVYDDTSRAKDRPGPVAGYPVVCITACNP
KYTDYDKTGSICASENINNTLTRYRWLVSAPTGPDGVTSPMREVDFDTFFTSSKMITLDS
IYFQAGSRVQCAARAVNSDGNEGLELMSPIVTISTDEGLCQPRVPGVVGAEPFSAKLRYT
GPEDPDYANLIKLTITMPHIDGMLPVISTRELSNFELTLSHDGTRVGNHKCSNLLDYTEV
KTHYGFLTDATKNPDVIGETIPYQHSASIRGTGTLRFYRNLNLEACLWEFVSYYDMSELL
TDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGIGGWQHFDLQSELRLTFVYDTA
ILWKDGIGSPPEAELQGSLYPTSMRISEEGRLVVNFKTEARFHGLFVMSHPASTLSSMVV
SADHPGLTFSLSLVRSEPTYNQPVQQWSFVSDFAVRDYSGTYTVKLIACTTVPHQEYSVP
VICNPREPITFDLDIRFQQVSDPVAAEFSLNTQMFLLSKKTLWLSDGSMGFGQESDVAFT
EGDIIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYSPPKAEYGCLADSPSLLYR
FKIVDKAQPETQATSFGNVLFNARLAIDDPEAIPLVKQPGSDGFKVDSTPLFQVSLGREW
YVHTIYTVRSKESANRGIGKRSVEYQYHSLVSGGNPGTSMQIRQKRGVKEAPELAKEIGI
ENSRGTNIQHIALDRTNKKQIPQREVTVNGILPRELNNRNPEVNIITIIGGAAAVLLAIG
LIAIIILFFKHKQSSEKKEVTKGSGSSEPMMPPHNYTTDSSEV
NT seq
9492 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcagccccgccgcacggactctgctgcccgcgctgctgctgctgctggcgggc
aggggcggcggggtccgggcgcagcagccgcccccgccgggcagccccgcgttctcctac
ccctcggcgctgggacccccggaagacgcctccatcgtggtggccaaccgcgggctgcgc
gtccccttcggccgctccgtctggctggacccgctgagcgacctggtgctgcaggtgcag
ccgggggaccgctgccacctgcgcgtcttggacgacgaccccctgtggctgcgcccgggc
cgcctcaccccgccgcgcttcccttgcgacttcggccccggggaggtgacgtactggcac
ctgggctcccgcagcccgtcccgggaccgggtccgcctgcagctgcgctacgactcgccc
agccgcgccgtggtgctgcccctggcgctggaggtggaggtgctcttcgcccagctggag
atcgtcacccgcaacctgccgctcaccgtggagagcctgctgggcaccagcaacgcgctg
gacggccgcagcctggagttcgccttccagccgggcagccagcgctgcagggtgggcgcc
ctgccggggctgggcgggctgccccgctacggggagctcctcagcccgccggctgccccg
tggcatgcctcggcggccggcgccccgtcgccctcgctctggtgggagtgcgaggagttc
ctgcggctggggctgcgctaccggcacgcggcggccggccgctccccgaaccgagactcg
ctgcccctggtggtggagctgcgggaggcggcgggcgccggcgcgctgctgaagcgggag
catttccaggtgctggtgcggatccgggcgggcgccgagaacacgccgccccggcccagc
ttcgtggccatgctgatgatggaggtggaccagttcgtgctcaccgccctcaccccggac
atgctggcggccgaggacgccgagtcggccccggacctgctgctcttcaacatcacctcc
cccttcgggccgggccagggccacgtggtcagcaccgacgaccgcagcctgcccatcgcc
tccttcagccagcgggacgtgcgggagctgcgggtcgcctaccagccgccggcggaggac
tcggcccgggagcggctcttcgagctggagctggaggtgctggaccccgagggcgctgcc
tccgagcccttcgccttcatgatcgtggtgaagcccatgaacacgctggcgcccgtggtg
acccgcaacacaggcctggtgctctacgaggggcagtcgcggccgctctccggcccgggc
cccagccccagcctgctcatcagcgatgaggacgacctggagcaggtgcgggtcagtgtg
ctggcggggctgcggcacgggcacctggccctgctggaggagcccctggccctgctgggg
gagtcccaggcccgcaagcacttcacggtggccgagctgatggctggccgcatcatctac
cagcatgacggcagcgagtccccgctcagcgacaacctggtgttgcggctggaggacggc
ggcgcccggcaccgtgtcgagttcctcttccccatcaccctggtgcccaccgatgaccag
ccgcccctgctcaacgctaacacggggctgtccttggctgagggcgacatagcccccatc
cccgcccgtgccctcagcgccaccgacatcgactcagacgacgctacactgcgctttgtg
ctggagtccgggcccggcgcagggcagctgctgctccgtcaggcccagccacccctgggc
tgggagggtgagaatgggggctccccctggaggagggtgctgggcttgcctggggatccc
ccagtgtacgagaggctggtgagtgagtggctgcagcaggacattgtggaagggcggctc
ttctaccggcacctcgggcaccccggccccagggtggtgctggaccagtttgtctttagg
gtccaggatgacaacgacccacccaaccgctccgggccccagagctttgtgatccgggtg
cacccagtggaccgcctggccccagtgcttcatggtggcagcagcctgcgtctggtggtg
gctgagcagcaagtaaccccactgcggaggaagcacctgcgctacacagatcaggactct
ggggaccgggagatccactacaccgtcacccagccccccactgacacagactccaaccac
cctgggggggccaagggcacccgcctgggatcactggtgctgactgatgaccactcagtg
gaggtgatgcatttcacccaggcccagatcaaccaccacaagatctcctaccggccccca
cagcaggagctgggggtggctccccgcctggctcagttccagtaccgggtggaggatgca
gctggtaatgctgcccaaggcaccttcaccatctacctgcagcccatagacaaccagccc
cctgagataaccaacagcggctttactgtgcatgaggggggaaggcatgtgctgggcctg
gctgagctggatgctagtgacactgacactgaccccactcacctggagttcaccctgacc
caggctccccagcatggacaattgcagctctctgggcacagcctggccatgggagcagcc
tttggtttagaggatattaaacatggcagggtggtctatgtgcacagtggtgctgagtct
cacaatgatgcctgcagtctggatgtgactgatggggtccatgtggtgcccatcacactg
aaggtgactgtgcaccctgtggatgatgaggtgcccaccttacggctgcccccagggaca
cttggctcctacttggacgtactggagaatggtgcggctgagatcaccactaacgtcatc
cagggcacggatgaggatacggatgatctgatgctgactttcattgtggaggaccctccc
caacatggggacatcctggtccagggggtgcctgcagaaaggttttcccagagagacgtg
ctggatggggctgtggtatatgctcacacgggtggtgaaatagggctgctgcccaaagaa
gatacttttaacctcactctgtctgacctgtctgaagagtggagcattgggggcaatgtt
gttcggggagtttcagtgctggtgaccatccttcctgttgacagtcaagcccctgaggtt
tttgtgggggaacacttaatggtagtggagggtgacaaaagggtcattacacatgcccac
ttaagggctgaagatgtggatacacccagtgatgatattctgtgcaccatagttgctcag
cccacctctggttatgtagagaacatctctccagccctaggatctgaaaagtccagagca
ggtacagctataagtgcctttactttgaaagacctcaggcaagggcacattttttacgtt
caaagcatccataagggtgtggagcctgttgaagacaggttcactttccgctgctctgat
ggcattaacttttccgaaaggcacttcttccccattgtcattatcccaaccaatgacgaa
gagcctgaaatctttatgcgagagtttgtagtgatggaaggcatgagcctggttattgat
actcccatcctcaatgcagcagatggggacatccctgctgatgaactgaccttcactatc
actaagtttcccaagcatggccacattgtgaatcagctgatcaatgggactgtcttagtg
gagagcttcaccctggatcagataactgagagctccagcattatctatgaacatgatgac
tctgaaacaaaggaagacagctttgaggtgaaactcacagatggtaaacatgctgtagag
aaaactgtgctcatcatggttattcctgtggatgatgagacacccagaatgaccatcaat
gatgggctggaaattgaaataggggaaactaaaatcatccacaacagaatactgaaggct
actgatctagattctgaagataaaaccttgacttacgttctaaggtatgggccaggacaa
gggctcttacaaagaataaaactttcaggtggggttgagaatatcactcttggaatgaac
tttacccaagatgaagtggacagaaatttaattcagtacatgcattttggccaagaaggt
attcgggatcttatcaaatttgatgttacagatgggataaatcctctcattgacagatat
ttttatgtgaccataggtagcattgatattgtcttcccagatgtgatcagcaaaggggtg
tccttgaaggaaggggggaaagttacacttaccactgatttactgagcaccagtgacttg
aatagcccagatgagaacttggttttcagtattacccgggcacctgttcgtggccatctc
gaatgcacggatcagtctgggatgcccatcaccaccttcactcagctccagttagcaggc
aataaaatctactatattcacacctcagaagatgaggtgaaaatggacagctttgagttt
gaagtgactgatggttataacccagtatttcgcactttccgaatttccattagtgatgtg
gataataaaaagccagtggtcacaatccataccctggtggtgagcgaaagtgaaaataaa
ctgataaccccctttgaactgacggtggaagacagagacacccctgatatgttgcttaaa
tttattatcacccaggtgccggttcacggtcagctcatgttcaataacaccaagccggtt
acatcctttaccaaacaagatctgaatgaaaatcttataagctacaaacatgatggcaca
gagtcagctgaagacagcttctctttcactgttacagatgggacccatactgatttctat
gtcttccctgacacagtgtttgaaacaaggaaaccccaaacaatgaacattcggataatg
gctgtggacaatagtgtaccccaaattgtagtaaataagggtgccccttctctccgtgtt
ttgaccactggccacttgggttttatgattaccaacaaagtgttcaaagtggaagacagg
gacagcttgcacattaccctcaagatcaggatcacagaggctcctcgccatggcttcctg
atccatctgggaaaaggcaaccatagtatcactcagttcacacaagctgatattgatgac
atgaagatatgctatgttttaagagaaggtgataacgccactagtgaccttttccatttc
accgttgaagatggtggaggcaataagctgaagagccagcattttcgtttgaactgggcc
tggatctctttagagaaggaatattatttggtaaatgaagactctaaatatctagatgtt
gttcttaagcggagaggttacctgggagaaacctcttttattagtattagcactaaagat
ggtactgctgagaaggataaagacttcaaaggaaaagcccagaagcaagtgcaattcaat
cctggccaaaccttagctacctggagagtgcggattttgagtgatggtgaacatgagcag
tctgagaccttccaaattgtgctttctgagcctgtcatggctgtcctagagtttcctgaa
gtggctacagtggaaattattgacccaggagatgaatcaaccgtttttattcctcaatcc
acatacacaattgaagaagacattggggaactgttcattcctgtcagaagaagtggagat
gtcagccaggaattgatggtgatctgctatacacagcaaggaacagcaactggtactgtc
ccaacatctgtgctgtcctactcggactatatatccaggcccgaggaccataacagcatt
ctccgctttgacaaagatgaacgagagaaaatgtgccgtattgtcatcatagacgattcc
ctgtatgaagaagctgagacatttgatgttctgctgagcatgccgatgggtggaagaatt
ggttcggaattcccagggactcaggttactattgtgcctgacaaagacgatgaaccagcc
ttctactttggagatgttgaatactatgttgatgagagtgctggctttgttgaggtgtat
gtctggagaactggaactgatttatccaaagctgctactgttacagtgaggtctcgcaaa
actgaaccaataactgcagaggctggggtagactacgtaggcatcagtcgtaatttggat
tttgcccctggagtcaacatgcagactttccgtgtgatcattctggatgaccttggacag
ccagtattagaaggaattgagaagtttgagcttgtgctgcgaatgcccatgaatgctatc
cttggagaaccaagcaaagctaccatcttcatcaatgactcagtctctgatttgcctaag
atgcagtttaaagaacctatgtacattggcaacgaaaatgatgaagagatttctgccatg
atatataggagcggggatatccgctacacatctacagtgcgctgctatagtcggcagggt
tcagcccaggtaatgatggactttgaagaacgtcctaacactgacgattccatcatcact
ttccttcctggtgagactgagaaaccttgcaccctcatacttgtggacgactctctccat
gaagaagaggaggagcttcgtctggttcttggcactccaagaagtgattcctcctatggt
gcttctattggcgaacaaaatgaaaccctgataaggatcagagatcatgcagacaaggcc
attattaagtttggtgagaccaaatttagtgtcagtgaaccaaaagatacaggacagctg
gtggttgtaaaaattccagtgcttcgtctgggagacacttcaaaggtttccattgtgagg
gttcacacaaaggatggctctgccacctctggagaagactaccaccccgtgtcagaagaa
attgaatttaaggagggtgaaacacagcacattgtggagattgaggttctttttgacggt
gttagggagatgagagaggccttcactgttcacctgaagcctgatgagaacatggtggca
gagatacagacagccaaggccattgtgtacattgaagaaatgaacagcatggcggatgtc
acctttccttcagtccctcaggttgcttctcttttggtatatgatgatacttctagagcc
aaagacagacccggtccagttgctggctaccctgttgtctgtatcacggcttgcaatcct
aaatatacagactatgacaagacaggctcaatatgtgccagcgagaatatcaataacacg
ctgactcgataccgatggctggttagtgcccctactggccctgacggtgtaaccagtccc
atgagagaggttgactttgatacattcttcacttcctccaagatgatcacactggactcc
atttactttcaagctggttctcgggtccagtgtgcagctcgtgctgtaaattcagatggg
aatgaaggcctagagctcatgagtcccattgtaacaataagcacagatgagggtctttgc
cagcctcgggtgccaggtgtggttggggcagagccattctctgccaagctgcgctacact
ggcccggaagatccagactatgctaatctcatcaaactgaccatcacaatgcctcatatt
gatggcatgttacctgttatctccacgagagagctgtccaactttgagctaaccctcagc
catgatggaactagggtgggaaatcataaatgctccaacctgttggattacacagaagtg
aagactcactatggcttcttgactgatgctaccaaaaatccagatgtgattggagagacc
attccctaccaacacagtgcgtcaatcaggggcaccggtactttacgcttctaccgaaat
ctgaacctggaggcctgtttatgggagtttgtcagctattatgacatgtctgagctcctc
actgattgtggaggcaccattgggacagatggacaggtcctcaacctagtacagtcctat
gtgaccttgcgagtccccttgtatgtctcctatgttttccattcacctgtgggtataggt
ggctggcagcattttgacctacagtctgaacttcggctgacttttgtgtatgacactgcc
atcttgtggaaggatggaattggcagcccacctgaagcagagctccaaggttctctctat
ccaaccagtatgcgcatcagtgaagaagggcgtttggttgtcaacttcaagactgaagcc
cgatttcatggtttatttgtgatgtctcatcctgcctccactctgagctccatggttgtg
tcagctgatcacccaggcctgacatttagcctcagccttgtgcggagtgaaccaacgtac
aaccaaccagtacagcaatggagctttgtttcagattttgcggtccgagactattctggg
acatacaccgtgaagctgatagcttgtaccacggtgcctcaccaggagtacagtgtacca
gtgatctgtaatcctagagagccaatcacatttgacctcgatatccgattccaacaggtc
agcgacccagtggctgctgagttcagcctgaatacccagatgttcctcctctcgaagaag
actctctggttatctgatggctcgatgggatttgggcaggagagcgatgttgctttcaca
gaaggtgatattatatatggtcgtgtgatggtggatccagtacagaacctgggtgattcc
ttttactgtagcattgagaaggttttcctgtgcaccggagcggatggatatgtacccaag
tatagtccaccaaaggcagaatatggctgtctcgctgattctccatccctcttatataga
tttaagattgtggacaaagctcagccagagacacaagccacaagctttggaaatgtgctt
tttaatgcaagactagccatagatgatcctgaggcaattcctttagtcaagcaacctggc
tcggatggatttaaagtagactcaacaccactgtttcaggtgtctttgggtagagaatgg
tacgtacatacaatctacactgtgagatcaaaagaaagtgccaaccgaggtattggcaaa
agaagtgtggagtaccaatatcactctctggtcagtggtgggaatccaggaacttcaatg
cagatacgtcagaagagaggggtcaaagaagctccagagcttgctaaagaaattggcata
gaaaacagcagaggaactaacattcagcacatagctttggaccgcaccaacaagaaacag
atcccacaaagagaagttacagtcaatggaattctccccagggagctgaataacagaaac
ccagaggtcaacataatcacgatcattggtggagctgctgccgttttacttgccattggt
ttaattgcaattattattttgtttttcaagcataaacagagctcagagaagaaagaagtc
acaaagggttcagggagcagtgagccgatgatgccaccacataattacactactgacagc
tctgaggtttga
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integrated database retrieval system
