Chelonia mydas (green sea turtle): 102944744
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Entry
102944744 CDS
T02989
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04010
MAPK signaling pathway
cmy04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102944744 (CACNA1H)
04020 Calcium signaling pathway
102944744 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102944744 (CACNA1H)
Ion channels [BR:
cmy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102944744 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102944744
NCBI-ProteinID:
XP_037767091
LinkDB
All DBs
Position
10:6163987..6644355
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AA seq
2493 aa
AA seq
DB search
MTDGERREPFQPLASDEVRVPIASLPSQAAQPGEDEDVLSPCKSIQGSLGSGGSSARDAA
QEDEEQVPYPALAPTVFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQPC
EDVDCKSERCTILEAFDHFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGM
MEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFI
FGIVGVQLWAGLLRNRCFLDSNFAMTYNFTLRQPYYQPEGEENPFICSSHRDNGMQKCSN
IPNRKEYRVECTLSMDSYNQNLYNPDFSNRSACINWNQYYNVCKAGDVNPHNGAINFDNI
GYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSE
TKQRENQLMKEQRARYLSNDSTIASFSEPGSCYDELLKYICHIFRKVKRRTLRLYNNWQS
KRRKKVTPNSAPSGQSRRSKKRITSIHHLIHHHHHHHHHYHISNGSPRGLRSNPEICDLE
LKAMKSGSQLMLPSPSPNLHSPPPHVDSESVHSIYHADCHVEGPQVKCKSSSASASIKLT
AGLTTNHGNMNYPTILPSPASKASSAPVPNGKEGGSTPVAMVNSPVSLNAAPFEKLHQLM
GEHGLCRTSSRLSGLNMPCPLPSPQPSTLTCELQNCPYCANILEDPEFEFSESDSYDSDN
NGVYEFTQDLRHGDQRDQIQQQRNKKRKKKKPKERNKVARLWVAFGNKLKRIVESKYFNR
GIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMVLKLLAFGIFGYIKNPY
NIFDGIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVAT
FCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWN
VVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSAN
FDEDFEKLRDLRATEMKMYSLAITPNGHVEGRGSVPPPIIMRTAATPMPTPKCSPHMDSV
HTFVDSRRGSNASVDPLSYDQKSLSSLRSSPCANWGPNSNWGSRRSSWNSLGRAPSLKKK
NQSGERESLLSGEGKGSTDDDSDDAKSSTVSRATLHRRAESLDYRSSLDLPELLQLPTMR
HSLSINPLAVLPAEYQDCNGKMVHVPSEFFLRIDSHKDDPLDYDDDMDDSYCYRIRKALE
PYKPEWCKNHEDWSLYLFSPQNRIRAMCQKVIAHKMFDHVVLVFIFLNCITIALERPDID
PHSMERIFLSVSNYIFTAIFVVEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDI
IVSMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCA
FFIIFGILGVQLFKGKFYYCEAPDTKNISTKADCTSVHYRWVRRKYNFDNLGQALMSLFV
LSSKDGWVNIMYNGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFH
KCRQHQEAEEARRREEKRLRRLEKKRRKAQRRPYYADYSPTRRYIHTLCTSHYLDLFITF
IIGVNVITMSMEHYNQPKTLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLD
LAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQA
LPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEDNPCEGLSRHATFTNFGMAFLTLFRVS
TGDNWNGIMKDTLRECTKEDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLEE
SNKEAKEDAEMDAEIELEMSRGGSTPANSGGGGGTSASDVRAPYGSQEAMKPESPMRVKH
QALEALSCENVSLAIPDSDPLEGRETPRMENTSFRSAPHHHVLTPSHKTPGCESEEGAAC
MRSKREPQNFLTVRKISVSRMHSLPNDSYMFRPVMPAKAPYPLHEVEMETYACKSQRGSV
TSIRSQPVGTCSSLRVPRELLQVTAVSSHHDSCDTWKIPSPQSTSRSPSLNRLLCRQEAI
RTDSLDGQNTDSKDSLQAESSESLQPKKQSQSNLGPALFHPSPLSQPGTPPHSPTSSSHH
RRPSVRTRKHAYSQHSIPSRPSSQNSNPASPENSLFESSDLADEEVSHINSLVKDWQEQP
EIRSRSVSPFISPASSLVPLKNCSTASLAGSNGRERDLRKFYSVDTKGFLDKPSWADDQR
RHSIEICPSIDNGDGSLEQPAEGKERSPVHIQSESEYIPGARRKKKMSPPCISIDPPMED
ESSTASRTKASENSMLRRRTPSCESTAYRDSLDMTDNQPGEQASKAERRVQPPCRGEHLT
IPNFSFEQSDPSSSSSLSDLLLDSGQATPSGVVSVDSRPDAAALELKKLDHLKTQCNNPE
KNKELLGVTKSPKRRHELVPVTVATDEDIDKPV
NT seq
7482 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagaggagagagcccttccagccactggcgagtgacgaagtccgggtg
cccatagcctccctccccagccaggcagcccagccgggagaggacgaggatgtgctcagc
ccttgcaagtcgatccagggcagcctgggctctggaggctcctctgcccgggatgcagcc
caagaggacgaggaacaggtcccttacccggccctggcacccactgtcttcttctgcctc
aagcaaaccacccggccacgcagctggtgcctcagactggtttgtaacccctggttcgag
catgtcagcatgctggtcatcctgctgaactgtgtcaccttgggcatgttccagccctgc
gaggatgtggactgcaagtcggagcgatgcaccatcctggaggcatttgaccatttcatc
tttgccttcttcgctgtggagatggtcatcaagatggtagctctggggatcttcgggcag
aagtgttacctaggagacacatggaatcgcctggacttcttcatcgtaatggccggcatg
atggaatattctctggatgggcacaacgtaagcttatctgccatccgaactgtccgggta
ctcaggcctctacgagccattaacagggtcccaagtatgcgaatactcgttaccctgctg
ttagatactctgcctatgttaggcaacgtccttctcttgtgcttctttgtctttttcatc
tttgggattgtcggcgtgcagctctgggcagggctgctcagaaacaggtgtttcctagac
agcaactttgcaatgacatacaactttactttacggcagccgtattaccagccggaaggg
gaggagaatccattcatctgctcgtcccatcgggataacggcatgcagaaatgctccaat
atcccaaacaggaaggagtacagggtggagtgcaccttgagcatggactcctacaaccaa
aatttgtataacccagatttcagcaacaggagcgcttgcataaactggaaccaatattac
aacgtatgcaaggcaggggatgtaaacccgcacaatggagctattaattttgataacatt
ggctatgcctggatagctatttttcaggttataaccctggaaggatgggtggacatcatg
tattatgttatggatgcgcattctttttacaattttatatattttatattgcttataata
gtgggctctttcttcatgattaacttgtgcctggttgtgatagcaacgcagttttctgaa
acaaagcagcgggagaaccagctgatgaaggagcagcgtgcccgctacctctccaacgac
agcacaatcgccagcttctcggagccgggcagctgctacgatgagctcctcaaatatatc
tgccacatcttcaggaaggtaaagcggcggacgttacgcctgtacaacaactggcagagc
aagcgccggaaaaaggtcacccccaacagcgcccccagcgggcaaagccgcagaagcaaa
aaacgcatcacctccatccaccacctcatccaccaccatcaccaccatcaccaccactac
cacatcagcaatgggagccctcgggggctccgctccaaccctgagatctgtgacctggag
ctgaaggccatgaagtctgggagccaactgatgcttccatctccatcccccaacctgcat
agccctcctcctcatgtggattcagagtctgtccatagcatttaccatgccgactgccac
gtcgaaggaccccaggtgaaatgcaagtcttccagtgcctctgcaagtattaaactgacc
gctgggctcaccaccaaccatggcaatatgaattatccaaccatcttgccttctccagct
agcaaagccagttctgccccggtacccaatgggaaggaaggtggcagcacccctgtggcc
atggttaatagccctgtgagtttgaatgcagctccttttgagaagctccatcaactgatg
ggagagcatggtctgtgtaggacttccagcaggctgtcgggtttgaacatgccgtgccct
ctgcccagcccccagcccagcaccctgacttgcgaactccagaactgcccctactgtgct
aacatcctggaggatcccgagtttgagttcagtgagtccgacagctacgactctgacaac
aacggcgtctacgaattcacgcaggacctgaggcatggagaccaaagagatcagatccag
cagcagaggaataagaagaggaagaagaagaaaccaaaggagaggaataaagtcgctaga
ctttgggtggcttttggcaacaagctgaaaaggattgtggagagcaagtatttcaaccgg
gggattatgatcgccattctgatcaacacgctgagcatgggaattgagtatcacgagcag
ccggatgaactgaccaacgctttggagatcagtaacattgtcttcaccagcatgtttgcc
ctggagatggtcctcaagctccttgcctttggtatcttcggttacatcaagaacccatac
aacatcttcgacgggatcatagtcatcatcagtgtctgggagatcattggccaatccgat
ggaggcctttctgtgttaagaacttttcggctgctcagggtcctcaaactggtacgcttc
atgcctgcccttcgccgccagctggtggtcctgatgaagacgatggataacgtggccacc
ttctgcatgctgctcatgctcttcatctttattttcagcattctcggcatgcatcttttt
gggtgcaagtttagcttgaaaactgatacgggggacacagttccagacagaaagaatttt
gattccttgctctgggccattgtgaccgtgtttcagatcctcacccaggaagactggaac
gtggtgctctataatggcatggcatccacctcctcgtgggcggcactctacttcgtggcc
ctgatgacctttggcaactacgtgctcttcaatctcctagttgccatcctggtagaaggc
ttccaagcagagggtgacgccaacaggtcggacacagatgaggacaagacatctgccaac
ttcgatgaggattttgagaagctgagagacctccgcgcaacagagatgaagatgtactcc
cttgccatcaccccaaacggtcacgtggagggcagggggagcgtaccccctcccatcatc
atgcgcactgctgctactcccatgccaacgcccaagtgctcgccgcacatggattcggtg
cacaccttcgtggactcaaggagagggagcaatgcttcagtggatcccctgagctacgat
caaaagtccttgtccagcctccgcagctcgccatgtgcgaactggggacccaacagcaac
tggggaagccgacgctcaagctggaacagcctcggcagggccccaagcctcaagaagaag
aaccagtctggggaaagagagtccttgctctctggggaggggaaagggagcacggatgat
gactccgatgatgccaagtccagcactgtcagcagagccaccctgcaccgccgggcggag
tccctggattacagaagctccttggacttgcctgagcttctccagctccccaccatgcgc
cactccctcagcatcaaccccctggccgtgctgcccgcagaataccaggactgcaatggc
aaaatggtgcatgtgcccagcgagttcttcctgcgcatcgacagccacaaggacgacccc
ttggactatgatgacgacatggacgacagttactgctacaggattcgtaaagccctggag
ccctacaaaccagagtggtgcaagaatcacgaagactggtccctctacttgttttctcct
cagaatcggattcgagcgatgtgccagaaggttatagcccacaagatgtttgaccatgtg
gttctggtcttcatctttctcaactgcatcaccattgcactggagaggcccgatattgac
ccccacagcatggagaggatatttctgagtgtctccaattacatcttcactgcaatcttt
gttgttgagatgatggtgaaggtggtggcccttggcttcttctctggggaaaatacttat
ctccaaagcagctggaatgtcctggatggggtcctggtctttgtatccatcattgatatt
atcgtctccatggcatcagcaggcggggctaagattttgggtatccttcgagtcttaaga
ttgctgcggaccttgaggcctctccgagtcatcagcagagccccaggtctaaaactggtg
gtggagaccttgatatcatccctgaggcctattggaaatattgtgcttatctgctgtgct
ttcttcattatcttcgggatcttaggggttcagctttttaagggcaagttctactactgc
gaagcaccagacaccaaaaacatctccactaaagccgactgcactagcgtgcactacaga
tgggtccggcggaagtacaacttcgacaatttagggcaggctctgatgtccttgtttgta
ctctcatccaaagacggctgggtgaacatcatgtataatggcctggatgctgtgggcatt
gaccagcagcccgtccagaaccacaacccgtggatgcttctctacttcatctccttcctg
ctcatcgtcagctttttcgtgctcaacatgttcgtgggggtggtggtggagaatttccac
aagtgtcggcagcaccaggaggcagaagaggcccgtcggcgggaggagaagcggctgagg
cgcctggagaaaaagcgcaggaaagcccagcgcagaccctactatgctgactattccccg
acgcggaggtatatccacaccctctgtaccagccactatctggacctgttcattactttc
atcattggagtcaatgtcatcactatgtcaatggagcactataaccagcccaagaccctg
gatgaagctctgaagtactgcaactatgtgttcaccatcgtttttgtgtttgaagctgtt
ctgaagttggtggcatttggttttcgaagattctttaaggacaggtggaaccagctggac
ctggccatagttcttctctcaatcatgggcatcacgctggaggaaattgaaatgaatgcc
gcgctgcctatcaatcccacgatcatacgcatcatgcgggtgctacgcatagcaagagtg
ttgaaactgctcaaaatggccacggggatgcgagctctcttggacacagtggtgcaggcg
ctaccccaggtagggaaccttggcctactttttatgctcctgttttttatctatgctgcc
ctgggagtggagctgtttggaaagctagactgcagcgaagacaatccctgcgaaggtctg
agccggcacgcaaccttcaccaacttcggcatggcctttctcaccctcttcagggtgtcg
actggagacaactggaatgggattatgaaggacacgctgcgggagtgcaccaaggaggac
aagcactgcctgagttacctgccagtcatctcccccgtctacttcgtcacctttgtcctc
atcgcccagtttgtcctggtcaatgtggtggtggccgtgctgatgaagcacctggaggag
agcaacaaggaagccaaggaggatgcagagatggacgcagagatagagctggaaatgtcc
agaggagggagcaccccagccaacagtgggggtggaggtggcacctctgcctcggacgtc
agggccccctacgggagccaggaggccatgaagccagagtcccccatgcgagtgaagcat
caagccctggaggcactgagctgtgagaatgtgtctttagccatcccagactcagacccg
ctggagggcagagagactccccggatggaaaacacgtccttccgctctgctcctcaccac
catgtcctgacaccttcccacaaaaccccaggctgcgagtcagaggaaggcgctgcttgc
atgagatcaaagagagagcctcagaacttcctaacggttcgcaagatctcagtgtcccgg
atgcactccttgcccaacgacagctacatgttccgccctgtgatgccagccaaagccccg
taccctctccatgaggtggagatggagacctatgcctgcaaatcacaaagagggtctgtc
acctccatccgttcccaacccgtgggaacatgctcctctctgagagtcccaagggagttg
cttcaggtgactgctgtatcttctcaccacgacagctgtgacacatggaagatcccttct
ccacagtccacatcacgatctcccagtctcaacaggctgctgtgtagacaggaggccatt
agaacggattcattggatgggcagaatacagattccaaggacagtctgcaagctgagtcc
agcgagagcctgcagccgaagaagcagtcccagagcaacttaggtccggctttgttccat
cctagcccgctctcccagccgggcactcccccgcattccccaacgtcatcctcacaccat
cgacgcccgagcgttcgtacccgcaagcacgcttacagccagcacagtattccgagcagg
ccttccagtcaaaatagcaacccagccagccccgagaactctctgtttgaatcctcagac
ctggctgacgaagaagtcagccacataaacagcttggtgaaagactggcaagagcagccg
gaaatcagaagccgctcggtctctcctttcatctccccggcttcatctctggtccctctc
aagaactgtagcacagccagcctggccgggagcaacggcagagagagagacttgaggaag
ttttacagtgttgatactaaagggtttctggacaagcccagttgggcagatgaccaaaga
aggcactccattgagatctgcccttccattgacaatggagacggtagcttggaacagccc
gcggaagggaaggaaaggtctcctgtccacattcagtctgagtcggagtatatccctggg
gctcggaggaagaagaagatgagcccaccttgcatttctatagatcctcccatggaggat
gaaagcagcacggcttcacgtaccaaagcctctgagaacagcatgctgaggagaagaacc
ccgtcatgcgaatccaccgcgtacagggactccttggacatgactgacaatcagcccggg
gagcaggcctctaaagcagaacggcgggtccagcccccgtgtcgaggggagcacctgaca
atcccaaacttctccttcgagcagtctgaccccagctcctcgagcagcctctcggatctc
cttttggacagtggccaggccacgccctccggcgtggtgtccgtggactcccggccagat
gccgcggcgctggaactgaaaaagctggatcacttaaaaactcagtgcaacaaccctgag
aaaaacaaagagcttctaggcgttacgaagagccccaaaaggcggcatgaactggtccct
gtgactgttgcaacagatgaagacatagacaaaccagtatag
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integrated database retrieval system
