Chelonia mydas (green sea turtle): 102945177
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Entry
102945177 CDS
T02989
Symbol
STAU1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmy01009
]
102945177 (STAU1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102945177 (STAU1)
Protein phosphatases and associated proteins [BR:
cmy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102945177 (STAU1)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102945177 (STAU1)
mRNA cycle factors
Stress granule specific factors
102945177 (STAU1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
102945177
NCBI-ProteinID:
XP_037771448
LinkDB
All DBs
Position
13:complement(17272369..17321763)
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AA seq
715 aa
AA seq
DB search
MSQVQIQNPSAALTGSQILNKNQSLSQPLSIPSTTSSLPSENAGRPLQNSALPSASVTST
SAAAAPSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWE
AEGTSIKKAQHAAAAKALEGTKFPKPTARPSRSEGKNPGIFQDRLFKNVYRIPTSELDSV
TPTVELNALCMKLGKKPMYKPIDPYTGMRSTYNYNMRGGAYPPRYFYPFPVGPLLYQVEL
SIGGQQFHGKGRTRQAAKHDAAAKALKILQNEPLPEKPEVNGKEPDDENLNKSEISQVFE
IALKRNLPVNFEFFPLKQVTKESGPPHMKSFVTKVFVGEFMGEGEGKSKKISKKNAAIAV
LEELKKLPPLPMVEKMKPRIKKKTKSIVKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEY
MLITERGLPRRREFVMQVKVGMHTAEGMGTNKKVAKRNAAENMLELLGFKVPQPQPPKPA
LKTEEKTPVKKPGDGRKVTFFEPGTEETSASNKDDEFRMPYLSHQQLPAGILPMVPEVAQ
AVGANQGHHTKEFNRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNNSSGHVPHGPL
TRPSEQLDYLSGVQGIQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAA
LNILKLLSELDQQSTEMPRQGNGPMSVCVKQEMESDPLLKPANSNTLGQTLDSTA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagttcaaattcagaatccatctgctgctctcacagggagccaaatcttgaat
aagaaccagtctctttcgcagcctttgagtattccttctaccactagttctctgccctct
gaaaatgcaggtagacctcttcaaaactctgctttaccttctgcatctgttacatccacc
agtgcagctgcagctccttctaacatggcaaaccccaaagagaaaaccccaatgtgtctt
gtgaatgagttagcccgtttcaacaagattcagcctgagtataagcttttgagcgagcaa
ggtccagctcactctaaggtgtttacagtgcagctgactcttggggaccagcactgggaa
gctgaaggaactagtattaaaaaagctcaacatgcggcagctgccaaagctttggaaggg
acaaaatttcctaaacctacagctcgcccgtctcgtagtgaaggaaagaatccaggtatt
ttccaggacaggctctttaaaaatgtgtataggatacccacatctgaacttgatagtgta
acccccacagtggagctaaatgctctttgcatgaagctgggaaagaaacctatgtacaaa
cctattgacccttacacagggatgagatctacctacaactataatatgagaggtggtgct
tatcctccacggtacttttacccatttcctgttggacccttactttatcaagttgagctc
tctattggaggacagcagtttcatgggaaaggaagaacaagacaggctgctaagcatgat
gcagctgctaaagcactgaaaattctgcaaaatgagcccctgcctgagaaaccggaggtt
aatggaaaagaaccagatgatgaaaatctcaataaatctgaaataagccaagtgtttgag
attgcacttaaaaggaacttgcctgtgaattttgagtttttccctctgaaacaggtgaca
aaggaaagtggtcctccgcatatgaagagctttgtaaccaaggtgttcgttggagaattt
atgggtgaaggtgaaggaaagagcaagaagatctcaaagaaaaatgctgcaatagcggtc
ctagaggaactgaaaaaactgccacccctccctatggttgagaaaatgaagccacgaatc
aaaaagaaaacaaaatcaatagtgaagctgcaaacaagcccagaatatggccaaggaatg
aatcccattagcagacttgctcagatacagcaggccaaaaaagagaaggagccagagtac
atgctcatcacagaacgtggtcttccaaggcgcagggagtttgttatgcaggtgaaagtt
ggcatgcacacagctgaaggaatgggtacgaacaagaaagtggctaaacgcaatgcagct
gaaaacatgctggagcttttaggtttcaaagtcccccaacctcaacccccaaagccagca
ctaaagacagaagagaagacaccagtaaagaaaccaggcgatggaagaaaagtaaccttc
tttgaaccaggcactgaagaaacttcagctagtaataaagatgatgagtttaggatgcct
tatctcagccatcagcagcttcctgctggaattcttcccatggtcccagaggttgcacaa
gctgtaggagccaatcaaggacaccacaccaaagagttcaacagggcagcccctaatcct
gccaaggctacagtaacagccatgattgctagagagctgttatatggtggtacatctcct
actgctgagaccatattgaagaataacaactcgtcaggccacgtaccccatggaccactc
actaggccctctgaacagttggactatctttccggtgttcagggaatccaggtggaatac
aaagactttccaaaaaataacaagaacgagtttgtatctcttataaactgttcctctcag
ccaccactgatcagccatggaattggaaaggatgtagaatcttgccatgatatggctgca
ctgaacattttaaagttgctgtctgagttggaccaacaaagtacagagatgccacgacaa
ggaaatggaccaatgtctgtatgtgtgaaacaagaaatggaaagtgaccctctcctcaaa
ccggctaactcaaacactttgggacaaacactggacagcactgcctga
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