Chelonia mydas (green sea turtle): 102945492
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Entry
102945492 CDS
T02989
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102945492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmy03021
]
102945492
03036 Chromosome and associated proteins [BR:
cmy03036
]
102945492
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102945492
Coactivators
SAGA/TFTC/STAGA complex
102945492
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102945492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
102945492
NCBI-ProteinID:
XP_037734127
LinkDB
All DBs
Position
12:complement(24063315..24259612)
Genome browser
AA seq
1119 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKAVSDLVGSLESQLAGGRGSAEGPPPNSSPPSHQQQEHQ
GTLVEGGSPVQQQQQQGHPAPPPLPGAGEAARCPSAVGSPTPAQGTPPALSAPAAAAGRG
ASVNSSSMQQSHGAAPLSITPSPPAAPVSLQAAAPPPPAGAPAQPVNNHVDVNATAPAAG
SGAREAESPRPGCSPPAAAAGAVNSVLLVNSEAATAGGSPEAAGAVTPAAAASRELSRAV
MLGSTAAAAPPPAAALSLLQRPALHTIPVAAHSANGTSSSLPVVVTQSLKAGCAPAAITQ
VVNHQNPSVGHNKPESSTAQTKLLTHNPAVNALSNSTSSVPTMNLVTHPAQSSVAKCAPV
VSSTITLNAISKPTVNIIGPPGSAVGVAKSATAVPVVSAVPQSLSPRPALGTAQRIVAPQ
LIVRPPQQTTIQLPPGFTIPPGMVLVRTEAGQLVMVPQQVLAQAQVQAQVQTQGQGTASI
SPRLPVPTSGPVFRLTASQQPTSVAATPVHLGLPLQAKVVQSTATSVSATSTATLPGVST
LSHTTVSVATTSAQSLIKTAVATGTPATQQPTVIFGGQTPAQPQGQPRLPLPPHMTAQVP
AQPQVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLL
DAKIDPEEFTGCLQSELKSSPQPYLVPFLKKSLPALRQSLLNSQHSVLQGQPSQQPLQQT
KLSQVIPQPASGSISSSVTTQTVGIKQPNSICTFVSNTVQPPHVKLVQSNQSSQLQIIQS
TSAQTVKRNPACQTTQIRMPVVITQTVRPQGTVGKTPTIQASPSPGGFGVQVSANQKMKL
NDPGGGSFRDDDDINDVASMAGVNLNEESARIMATNSDLVGTQIQSCKDEPFLAAIPLHK
RILEMAKKLGMTDVPAEVVTFISHATQNRLRTVIEKVTMVTQHRMESHKDDEWYEQATDV
RSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMR
QRDANLTALAAIGPRKKRKLDSPGLLTIGGEVVWSFRMKSGEKKALGMTSGGQAGFGAPS
SRQYARQKITRVNLRDFIFYMEQERETSHSLLLYRALLK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcctcggaccccctggaagagatgctgctcttctctgaagaggtggac
gagaaggcggtcagcgacctggtgggctccctggaatcgcagctggccggcgggcggggc
tccgccgagggccccccccctaacagcagccccccatcccaccagcagcaagagcaccag
gggaccctggtggagggcggcagcccagtccagcagcagcagcagcaagggcatcctgct
cctcctcctctccccggggcaggggaggcagccaggtgtccaagtgccgtgggcagccca
accccagcccaggggacacccccagccttgtccgccccagcggcggcggccgggcgggga
gcgagtgtaaacagtagtagcatgcagcagtcacatggagcagctcctctcagcatcacc
ccgagtccacctgctgcccctgtctcactgcaagccgctgccccacctccgcctgctggc
gccccagcacagcctgtcaacaaccacgtggatgtcaatgccactgctcccgctgctggc
agtggtgcccgggaagcggagagtcccagacctgggtgtagtcctcctgcagcagccgct
ggtgcggtgaacagtgtgttgctggttaactccgaggccgccactgctggggggtcgcct
gaggctgccggtgctgtcactccagcagccgcagcaagtcgggaactttcaagggcggta
atgctgggtagtacagctgctgctgctcctcctcctgctgctgctctctctcttctccag
agacctgcactgcatactattcctgtcgctgcccacagtgcgaatggcacttcctccagc
cttcctgtggttgtcactcagagcctaaaggctggttgtgccccagcagcaataacacaa
gttgtcaaccatcagaatccgtctgtcggccacaacaaaccagaatcctccacagcacag
actaaactcctcacacacaatcctgcagtaaatgcactcagtaactctaccagttctgtt
cctacaatgaatcttgtcacccatccagcccaaagttcagtagccaagtgtgcccctgta
gtgtccagcaccatcaccctcaatgctatatctaaacccacagtaaatattatagggcca
cctggctctgccgttggtgtagccaaatcagccactgctgtacctgtcgtctctgcagtc
ccccagtcgctgtcacccaggcctgcattaggcactgctcagagaatagttgcaccacaa
ttgattgttagaccgcctcagcagactacaatccagttgcctccaggttttactatacca
cctggtatggtcttggtgcgcacagaagctggacagcttgtaatggtacctcagcaggtt
ttagcccaggctcaagtgcaagctcaagtacaaacacaggggcaaggtaccgccagcatc
tcacccaggcttccagtgcccacaagtggtccagtgtttcgtttaacagcaagccagcaa
ccaacttctgtagccgcaactcctgtccaccttggacttccactgcaagccaaagttgta
cagtcgactgctacatcagttagtgctacatctactgcaaccttacctggagtctccacg
ctgtcacacactacagtatcagtagctaccacaagtgctcagagcttaattaaaacagca
gtagcaactggaaccccagcaactcaacaacctacggtaatttttggaggacaaacccca
gcacaaccccaaggtcagcctcgattgccacttccacctcatatgacagcacaggtacca
gcacagccccaggtcatacctagctctcctgtaccagggactacagttgtatcacaggaa
atgcaagagaatgtgaagaaatgcaaaaactttttagctaccctgataaaacttgcttcc
cataattcaccttctccagaaacatcccgtaatgtgaaagctctggttcaggatttgctg
gatgcaaagattgatccagaagaatttacaggctgccttcagtctgagctgaaatcatct
cctcagccttatctagtacctttcctgaagaaaagtctgccggcattgagacaatcttta
ttgaatagccaacattcggttttgcaaggacagccatctcagcagccgcttcaacaaacc
aagctgtcacaagttatacctcaacctgcctctggaagtatttcctctagtgtcacaact
cagacagtaggaataaagcaaccaaacagcatttgcacatttgtatcaaatacagttcag
cctcctcatgttaaactagtacaatcaaatcagagttctcaactgcagattatccagtca
acatctgctcaaactgtgaaacgaaaccctgcttgccagactacccagattaggatgcca
gtggtaataactcagaccgttagaccacaaggcacagtagggaagacaccaacaatacaa
gccagcccaagtcctgggggctttggtgttcaggtctctgcaaatcagaaaatgaagctg
aatgaccctggaggtggatctttcagagatgacgatgacatcaatgatgttgcctctatg
gctggagttaaccttaatgaagagagtgcccgaattatggcaaccaactccgacttggtt
ggaacccagatacagtcttgtaaagatgaaccctttcttgctgctatccctttacataaa
cgaatactagaaatggctaaaaaattaggaatgacagatgtgcccgctgaggtagttacc
tttatttcccatgcaacacaaaaccgattgagaacagtgatagaaaaagtaacaatggta
acacagcaccgaatggaatcgcacaaagacgatgaatggtatgaacaggctacagatgtt
cgatcacagctgaagttttttgaacagttggagcgtttagaaaagcaaagaaaagatgaa
caagagagggaaattttgttaaaggcagccaagagtcgctcaaggcaagaagacccagag
caagctagattgaaacaaaaagcaaaggagatgcagcaacaagaactagcacagatgagg
cagagggatgccaacctaactgcattggcagctattggtccacggaagaaacggaagctt
gattcacctggcttacttaccataggaggagaggtcgtatggagctttagaatgaagtct
ggggagaaaaaggctttgggcatgaccagtggaggtcaggctggttttggggctccttca
tccagacagtatgcacgacagaaaataactcgagtaaacctcagggacttcatcttttac
atggaacaggaaagagaaactagccattctctcctgctctacagagctttgcttaaataa
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integrated database retrieval system
