Chelonia mydas (green sea turtle): 102945530
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Entry
102945530 CDS
T02989
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102945530 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmy03041
]
102945530 (RBM22)
Spliceosome [BR:
cmy03041
]
Complex B
Other components
Prp19-related factors
102945530 (RBM22)
Complex C
102945530 (RBM22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_10
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
102945530
NCBI-ProteinID:
XP_037763031
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All DBs
Position
8:6573264..6584846
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AA seq
459 aa
AA seq
DB search
MPGSRPFFLSRCMPGRWRSGARARFRPGLAAAATGAGSKMATSLGSNTYNRQNWEDADFP
ILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVC
QTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNSDGTRPVGALGKAT
STSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDR
YYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTI
TVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKEGTTES
GIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGP
HMFHTMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHNTP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcacggcccttcttcctttcgcggtgcatgccgggccgctggcggagcggc
gcgcgcgcgcgcttccgtccgggccttgcggctgcggccaccggggctggttccaagatg
gcgacgtccctgggctccaacacctacaaccggcagaactgggaggacgcggacttcccc
attctgtgtcagacatgccttggagaaaacccctatatcagaatgaccaaagagaaatat
ggaaaagaatgcaagatttgtgccaggcccttcacagtgtttcgctggtgcccaggtgtt
cgaatgcgctttaagaagacagaagtgtgccaaacatgtagcaagctgaagaatgtgtgt
cagacctgcctgcttgacctggaatatggtctacctattcaggttcgagatgcaggactc
tcttttaaggatgacatgcctaaatctgatgtcaataaagagtattacacccagaacatg
gagagagaaatttcaaactctgatggcacaagaccagttggtgctctaggaaaagctact
tctaccagtgacatgttgcttaaactggctcggaccaccccttactataaacgcaaccga
ccccacatctgttctttttgggtgaaaggagaatgcaagagaggggaagagtgtccctac
agacacgagaaacctacagacccagatgatcctctggccgatcagaacatcaaagatcgt
tattatggtattaatgatcctgtagctgataagcttctgaaacgggcttcaaccatgcct
cgtctggacccacctgatgacaagaccattaccacactatatgtaggaggcctgggagac
accatcaccgagactgatctgagaaatcacttctaccagtttggagagatccggacgata
accgtggtacagaggcagcagtgtgcattcatccagttcgcgacacggcaagctgcagaa
gtggctgctgagaaatcctttaacaagcttattgtcaatggacgcagactcaacgtcaag
tgggggaggtcccaagcagcaagagggaaagagaaggagaaagaaggtactacagaatct
ggtataaagctggagccagtcccaggactacctggagctcttccccctcctccagctgca
gaagaagaagcatctgcaaattacttcaacctacctcccagtggccctccagccgtggtt
aacattgccctgccaccaccccctggcattgctccgcccccacctccaggttttggaccg
cacatgttccacaccatggggcctccacctcccttcatgagagccccaggccccatccac
tacccttctcaagatccacagaggatgggtgcccacgctgggaagcacaacactccctag
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