Chelonia mydas (green sea turtle): 102945553
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Entry
102945553 CDS
T02989
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102945553 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmy03036
]
102945553 (HDAC4)
Enzymes [BR:
cmy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102945553 (HDAC4)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102945553 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
102945553
NCBI-ProteinID:
XP_027679020
LinkDB
All DBs
Position
11:72574601..73034589
Genome browser
AA seq
1089 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPPRVNHMPSSVDVNTALPLQVAPTSVPMDLRLDHQFSMP
VTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCISNDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACNSAPGSGP
SSPNNSSNNISAENGITGSVTSIQAETSLAHRLVNREGSVTQLPLYTSPSLPNITLGLPA
TGPASGGSGQQDAERLAIPTLQQRLSLFPGTHLTPYLSTTTLERDGGTSHNSLLQHMVLL
EQPTAQTPLVTDWYLSGLGPLPLHAQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQ
ALQQLVIQQQHQQFLEKHKQQFQQQQLHINKMIPKPNEPARQHESHPEETEEELREHQAL
LEEPYSDRVSSQKEMQGLANMVQVKQEPIESDEEETEPPPELEPGQRQAEQELLFRQQAL
LLEQQRIHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTG
LVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVH
SEAHTLLYGTNPLNRQKLDSKKLLGSITSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAV
GCLIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKIL
IVDWDVHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFT
GGLEPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGY
LTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLSENVLQQRANANAVH
SMEKVIEIHSKYWHSLQRYSSTVGYSLIEAQKCETEEAETVTAMASLSVGVKPADKRPDD
EPMEEEPPL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggccgagatcagccagtagagctgcta
aatccacctagagtgaaccatatgcccagttctgttgatgtgaacacagcattgcccttg
caagttgcaccaacttcggtccccatggatctccgcttggaccaccagttttccatgcca
gtgacggaacctacactccgagaacagcaactccagcaggaactcctggctctcaaacaa
aaacaacaaattcagagacaaatccttatagctgagttccagaggcagcatgagcaactt
tcccgtcagcatgaggctcagctacatgaacatataaaacagcaacaggaaatgctagca
atgaaacatcagcaggagctcttggagcaccagagaaagttggagcaacatcgacaggaa
caagagctggagaagcagcatagagaacagaaactacaacagctaaaaaacaaagagaaa
ggaaaagaaagtgcagtggcaagcacagaagtaaaaatgaaattacaagagtttgtctta
aataaaaagaaagctttggcacaccggaatctcaaccattgcatttccaatgatccccgc
ttctggtatgggaaaactcagcacagttctcttgaccagagttcccccccacaaagtgga
gtatcaggcacctacaatcaccctgtactggggatgtacgattccaaagatgactttcca
ctccgaaaaacagcatctgaacccaacctgaagttacgatccagattaaagcagaaagtt
gctgaaagacggagcagtcccctgttacgcaggaaagatggcccagtggttactgctctg
aagaagcgtcccctggatgtcacagactctgcatgcaacagtgctcctggatctggtccc
agttctccaaacaacagctctaataatataagtgctgagaatggaattacaggatcagtc
acaagtattcaagcagagaccagcctggctcacagactagtgaatcgtgaaggctcagta
acacagcttcctctgtacacatctccttccttgcccaacataacgttaggcttgcctgca
actggacctgcaagtgggggatcaggacagcaggatgccgagagacttgctattccaacc
ctacaacagcggctttccttatttcctggcactcacctcactccttacttgagcactacg
acgttggaaagggatgggggaacttcacataactctcttctgcaacacatggtcttactg
gaacaaccaactgcacaaactcccttagtcacagactggtatctttcaggcttggggcca
ctgcccctccatgcacagtctctggttggtgcagatcgggtctccccctcaatacacaaa
ctccggcaacaccgccccttggggcgcacgcagtctgctccccttccccagaatgcccag
gccctccagcagttagtgatccagcaacagcatcaacagttcctggagaaacacaaacag
caattccagcaacagcaacttcacattaacaagatgataccaaaaccgaacgagccagcc
cgccagcatgaaagccaccctgaggagacggaagaggagttacgagaacaccaagcgctt
ttggaggagccatacagtgaccgagtctcaagccaaaaagagatgcaagggttggccaat
atggtgcaggtgaagcaagagcccattgagagtgatgaagaggaaacagagccaccaccg
gaactagagccagggcagaggcaagctgaacaggagctgctcttccgtcagcaagccctt
ctcctggagcagcaacgcattcaccagctgagaaactaccaggcatcaatggaggcagct
ggcatcccagtgtcttttggaggacatcggcctctgtctcgtgcgcagtcctcacctgca
tctgccaccttccccatgtccgtacaggagccacccactaagccaaggttcacaacaggc
cttgtctatgacaccttgatgctgaaacaccagtgtacctgtggaaacacaaacagccac
ccagagcatgcagggagaatccagagcatctggtcccggcttcaagagacaggcctccgt
ggcaagtgtgagtgtattcgtggaagaaaagcaactctagaagagctacagacagttcac
tcggaggcgcatacgctgctgtatggcacaaaccctttgaacagacagaaactggacagc
aagaaacttctaggttctataacatcaatgtttgtcaggctcccttgtggtggtgttgga
gttgacagtgacacaatttggaatgaagttcattcatctggtgctgctcgcctggctgtg
ggctgtctcattgaacttgtttttaaagtggccacaggagaattgaagaatggatttgct
gttgttcgacctccaggtcatcatgctgaagagagtacacccatggggttctgctatttt
aattcggtggcaattgcagccaagcttctccaacagagactcaacgttagcaaaatcctt
atagtggactgggacgtgcaccatgggaatggtactcagcaggctttctacagtgatcct
aatgttctttatatttcactacatcgctatgatgatggaaacttcttcccaggcagtgga
gctcctgatgaggtcggcacaggaccaggtgttggtttcaatgttaatatggcgtttact
ggtggcctcgaaccaccgatgggagacacagaatatttgactgctttcagaacggtagta
atgccaattgccaatgaatttgccccagatgttgtgctggtgtcatctggttttgatgca
gtggaaggccatcctacgcctcttggaggatataatctatcagcaaaatgctttgggtac
ctgacgaagcagctgatgggattggccggaggtcgaattgttctggcccttgaaggaggt
catgacctgacagctatttgtgatgcgtctgaggcatgtgtttctgctttgctgggaaac
gagcttgatcccctttcagaaaacgtcttgcagcagagggcaaatgccaatgcagtgcat
tccatggaaaaagtaattgagatacacagcaagtattggcattctctccagcgttactcc
tccacggtggggtactccttgatcgaggcacagaagtgtgagactgaagaagcagaaaca
gtaacagccatggcatctctgtcagtgggcgtgaagccagctgacaagagaccagatgat
gaacccatggaagaggagcctcccctgtag
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integrated database retrieval system
