Chelonia mydas (green sea turtle): 102945641
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Entry
102945641 CDS
T02989
Symbol
TNN
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04510
Focal adhesion
cmy04512
ECM-receptor interaction
cmy04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102945641 (TNN)
04518 Integrin signaling
102945641 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102945641 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cmy00536
]
102945641 (TNN)
Glycosaminoglycan binding proteins [BR:
cmy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102945641 (TNN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_TEN
Fn3_PBP1
DUF4998
Pur_ac_phosph_N
EGF_Teneurin
Fn3_VIN3
EGF_2
Fn3_Dep-1_2nd
EGF_Tenascin
DUF7949
Motif
Other DBs
NCBI-GeneID:
102945641
NCBI-ProteinID:
XP_007061293
LinkDB
All DBs
Position
8:48679738..48729565
Genome browser
AA seq
1123 aa
AA seq
DB search
MSVWSWLTFPQGMFLYLALQIAAVQLPHEPHNCTSNGQKISFSHSYKIDLPKSSQIKVEA
DPLPLKDDSHVLLAAGDADEEEEQNIIFRHNIRVQTPRGDCEALGHMKDLVERMEKMEKE
MMVLKEACSVQRCCGGVQGVSNCSGHGTFIQEICGCDCDEGWEDSDCSRPSCPNNCNGNG
RCVDGKCICSKPYVGEDCSQRLCPMNCSGNGICNNGVCQCYEEFIRDDCSEKRCPNDCSG
NGFCDSGECYCHDGFIGLDCSQVIAPQNVQLLKTTEDSLTFSWDQVLDVDNYLLSYYPIG
HEASAVQVRVPKGQLSYEIPGLHPSTKYQITLRYVKKGISSNPEHLQARTALSAVSAAWV
TEEMEDSLEVEWENPPTEPDYFKLRFSSPQGQEKEVVVPKSSEPKSRYIISGLKPGTEYK
IFVISVKDEIEGKPSIVNGQTGIDSPTHLETDRVTEDTATISWNRVQAPIDTYMVSYTSA
DGDTREIAVGKDQNTTTLMGLKPGMEYVIYIWAEKEGLQSKRANTKAETEIDSPTNPVTD
RVTEDTATISWNEVQAPVDRYVVSYTSADGDTRERAVGKDQSTITLTGLKPGLEYIIYIW
AEKGGQKSKRANTKAVTEIDSPTNLVTNRVTEDTATISWNRVQAPIDRYMVSYTSADGDT
REIAVGKDQSTTTLTGLKPGIEYNIYTWAEKGGQQSKRTNTKAVTDIDSPINLVTDRVTE
GTATISWNRVQAPIDRYMVSYTSADGDTREIAVGKEKSIITLTDLMPGMEYIIYIWAEKG
GQQSKRTNTKAVTEIDSPKNLRVSDVTHSSGVVTWTPPAAQISGYTLTYQAPDGTSKEVQ
LGPNEQRFILEGLGQGVRYTVYVVAFKGDRRSRKAANTFLTVAFLYPYPADCSQTQQNGN
ATSGMYTIYLNGDAGRPMQVFCDMTTDGGGWIVFQRRNTGQLDFYKRWRNYVEGFGDPLG
EFWLGLDKLHNLTSSTPIQYEIRVDLQTSNDSAYAVYDFFQVASSKDKYRLSVGNYQGTA
GDALTYHNGWKFTTWDRDNDVALSNCARSHQGAWWYKNCHLANLNGKYGENKHSEGVNWA
PWKGHLFSIPYTEMKIRPQSSSNEPILGRKKRSQAGKRKTTRA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtctggagttggcttactttccctcaggggatgttcctgtaccttgctctccaa
atagctgctgttcagctcccccatgaacctcacaactgtaccagcaatggtcagaaaatc
tccttcagccactcatacaagattgacctacccaaatcatcccagatcaaggtggaggcg
gacccgttgccgctcaaagacgacagtcatgtgctgcttgctgctggggatgcagacgag
gaggaggagcagaatatcatattcaggcacaacatccgagttcagacaccgagaggtgac
tgtgaagctttgggacacatgaaagatctggtggaaaggatggaaaagatggagaaagaa
atgatggtgctcaaggaggcctgcagtgtacagaggtgctgtgggggagtccaaggtgtc
tcgaattgcagtggccatggaactttcatccaagagatctgtggatgtgactgtgatgaa
ggctgggaggacagcgattgctcccgccccagctgccccaacaattgcaatggcaatgga
cgctgcgttgatggcaaatgcatctgcagcaaaccctacgttggtgaagactgcagtcag
cggctgtgccctatgaactgcagtggcaatgggatctgcaacaatggtgtgtgccagtgc
tatgaggagttcattcgagatgactgcagcgagaagagatgccccaatgactgcagcggc
aacggtttctgtgacagtggcgagtgctactgccacgatggtttcattgggcttgactgc
tcccaggtcattgctcctcagaatgtgcagctgctgaagaccacagaagattctttgacc
ttcagctgggatcaggtgctcgacgtggataattacctcctcagctattatccgataggg
catgaggcctccgcagtacaagtcagagtgcccaaaggacagctcagctatgagatcccg
ggccttcatcctagcacaaagtatcagatcacacttcgttatgtgaagaaggggatttcc
agtaacccagaacacctacaagcaaggacagccctatctgcagttagcgctgcctgggtg
acagaggagatggaggactcgctggaagtggagtgggagaaccccccaacagagccggac
tattttaaactgaggttcagctcaccgcaaggacaggagaaggaggtggtggtgcctaaa
agcagcgaaccgaagagcagatacatcatcagcggcctgaagcctggcacagagtacaag
atctttgtcatatccgtgaaggatgagattgaaggaaaaccatctatagtgaatggccaa
actggaatagatagcccaactcacctggagaccgaccgagtgacagaggacacagccacc
atctcatggaacagggtccaggctcccatagacacatacatggtgagctacacctcagct
gatggggacaccagagagatagctgtagggaaagaccagaataccaccaccctgatgggt
ctgaagccaggcatggagtacgtgatctacatttgggctgagaaggaaggcttgcagagc
aagagagcaaacacgaaagctgagacagaaattgacagcccaacaaacccggtgacagac
cgagtgacagaggacacagccaccatctcctggaatgaggtgcaggctcccgtagacaga
tacgtggtgagctacacctcagctgatggggacaccagagagagagccgtggggaaagac
cagagcaccatcaccctgacaggtctgaagccaggcctggagtacatcatctacatctgg
gctgagaagggaggccagaagagcaaaagggcaaacactaaagctgtgacagaaattgac
agcccaactaacctggtcaccaatcgagtgacagaggacacagccaccatctcctggaac
agggtccaggctcccatagacagatacatggtgagctatacctcagctgatggggacacc
agagagatagctgtggggaaagaccagagcaccaccactctgacgggtctgaagccaggc
atagagtacaacatctacacctgggctgagaagggaggccagcagagcaagaggacaaac
actaaagctgtgacagacattgacagcccaattaacctggtgaccgaccgagtgacagag
ggcacggccaccatctcctggaacagagtccaggctcccatagacagatacatggtgagc
tacacctcagctgatggggacaccagagagatagctgtggggaaagagaagagcatcatc
actctaacggatctgatgccaggcatggagtatatcatctatatctgggctgagaaggga
ggccagcagagcaagagaacaaacacgaaagctgtgacagaaattgactctcccaagaac
ctccgtgtatcagatgtgacacacagcagtggtgtagttacctggacaccgcctgctgca
cagatcagtggctacactctgacctaccaggctccagatggcaccagcaaggaagtgcaa
ctgggtcctaatgagcaaaggttcatactggaaggcctgggacaaggagtgaggtacaca
gtctacgtggtggcctttaagggagatcgccggagcagaaaggcagccaataccttcttg
acagttgccttcctctacccatatcctgctgactgcagccagacccagcaaaatgggaat
gccaccagtggcatgtacactatctacctgaatggtgatgctggcaggcccatgcaggtg
ttctgtgacatgaccaccgatggaggcggatggatagtgtttcagaggcggaacacaggg
cagctggatttctacaagcgctggaggaattatgtcgaaggctttggagatcccctgggg
gaattctggcttggtcttgacaagctgcacaatctcactagcagtactcccattcaatat
gagatccgggtggatctgcagacctccaatgactctgcctatgctgtctatgacttcttc
caggtggcttcgagcaaggataagtacaggctctcggtggggaattaccaaggcactgct
ggggatgcgctgacttaccacaatggctggaaattcaccacctgggatagggacaatgat
gtggctctcagcaactgtgcgaggtcacaccagggtgcctggtggtacaagaactgccac
ttagctaacctcaatggcaaatatggagaaaacaagcacagtgagggggtcaactgggca
ccatggaaaggccatttgttctccatcccttacactgaaatgaagatccgtcctcaatca
tccagcaatgaaccaatcctggggaggaaaaaaaggtctcaggcagggaagaggaagacg
accagggcctaa
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integrated database retrieval system