Chelonia mydas (green sea turtle): 102945740
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Entry
102945740 CDS
T02989
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03013
Nucleocytoplasmic transport
cmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102945740 (PNN)
03015 mRNA surveillance pathway
102945740 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102945740 (PNN)
03041 Spliceosome [BR:
cmy03041
]
102945740 (PNN)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102945740 (PNN)
Spliceosome [BR:
cmy03041
]
Complex C
Other components
EJC/TREX
102945740 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
102945740
NCBI-ProteinID:
XP_007065299
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All DBs
Position
6:89865912..89878901
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AA seq
783 aa
AA seq
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MGCGGVTPSWGSLIGRRVGRFLAVGGVVLRRGLVIGGRGWSVVGYWCHSGFELCDWRVTE
RDELPVGGASLPVTQRCFALGPWLGRAAGGMAVAVRALQEQLEKAKESLKHVDENIRKLT
GRDPNDVRPAQGRLLTITGPGGGRGRGSILLRRGFSDSGGPPAKQRDLEGATSRLGGERR
TRRESRHESDAEDEDVKKPALQSSVVATSKERTRRDLIQDQTMDEKGKQRNRRIFGLLMG
TLQKFKQESTVATERQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQTELRLLEQ
KVELAQLQEEWNEHNAKIIKYIRTRTRPHLFYIPGRMCPATQKLIDDSQKKMNAIFENRR
NEFAEQINKMEARPRRQSVKEKEQQEVHNEEKKEEQNKEQEEGKVAQQVEEMETGNQNND
VEMEEAGEEKVKIGAGHSDAEREQEEEEEQKHEIEDKVEERGEVKENDRQQDSQREEVMV
VREEGESSQPVDNEQDMMEMNEADSVEPLESENSKEVEPEAESEAQPAKELNADSPEKET
ANKPEIEAEPEEKQEKEPEAQPEPEAEIQPQPESVPLPQPPPLSQSIQDQEPRADQEEIA
AVSVKLGELQSDQIQATSVEIKSKTRSRSRGRTRNKTSKSRSRSSSTSTSSSSSTSSSSG
SSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSSTSSSESRSRSRGRGHNRDRKHRRSLDRK
RRDASGLDRSHKSSKGSSRDTKGSKDKSSRSDRKRSVSENSRSGKRTSRSERDRKSDRKD
KRR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtgggggtgtcactccgtcatggggctctttaattggcagacgagtcgggcga
ttcttggcggtgggaggtgtcgttcttcgtcggggtttggtgattggcgggcgcggatgg
tcggtggttggctattggtgtcactctggctttgagctctgtgattggcgggttacagag
cgggacgagttgcctgtaggcggagcgtctctccccgttacccagcggtgctttgcgcta
ggcccctggctaggccgcgctgctggcgggatggcggtggcggtgcgcgcgctgcaggag
cagctggagaaggccaaggagagcctcaagcacgtggatgagaatatccgcaaactcacg
ggccgggaccccaacgatgtgaggcccgctcaaggtagattattgaccatcacaggccct
ggtggaggtagagggcgtggtagcatattgctaaggcgtggattctcggatagtggagga
cccccagccaaacagagggatcttgaaggggcaaccagtaggctgggtggggaacgtcgg
acaaggagagaatcacgccatgaaagcgacgcagaggatgaagatgttaaaaagccggcg
ttgcaatcttctgttgttgctacctccaaagagcgaacacgtcgagacctaattcaggat
caaactatggatgagaagggaaaacaaaggaatcgacgtatatttggcttgttgatgggc
actcttcagaaatttaaacaagaatccacagttgctactgagaggcaaaagagacgtcaa
gaaattgaacaaaagcttgaagtgcaggcagaggaggagagaaagcaggttgaaaatgag
aggcgagaattgtttgaagaaaggcgtgctaaacagacagaactgcgtctattggaacaa
aaggttgaacttgctcaactgcaagaagaatggaatgaacataatgccaaaataattaaa
tatataagaaccaggacaaggccccatctcttctatatacctggcaggatgtgtcccgct
acgcaaaagctaatagatgattcgcaaaaaaaaatgaatgcaatatttgaaaatagacgc
aatgagtttgcagaacaaattaacaaaatggaggccaggcccagaagacagtctgtaaag
gaaaaagaacagcaggaggtgcacaatgaagaaaagaaagaagagcagaacaaggagcag
gaagagggtaaggtggctcagcaggtggaagagatggagacaggtaaccagaacaatgat
gtagaaatggaggaggcaggggaggaaaaggtgaaaataggggcaggtcatagtgatgca
gagagagaacaggaggaggaggaggagcagaaacatgaaattgaggataaggtagaagag
agaggtgaggtgaaggagaatgacaggcagcaggatagtcagcgtgaagaggtcatggtt
gtaagagaggaaggtgagagttctcagccagtggataacgagcaggatatgatggagatg
aatgaggctgatagtgtagaaccattagaaagtgaaaatagcaaggaagtggaaccagaa
gctgagtctgaagctcagccagcaaaagagcttaacgctgattctcctgaaaaggagaca
gctaacaaaccagaaattgaagctgaacctgaagagaaacaggaaaaggagcctgaagcc
cagccagagcctgaggcagagatacagccccagccagagtctgtgccactgccacagcct
ccaccattgtctcagtccattcaagatcaagagcctcgggcagaccaggaggaaatcgct
gcggtgtctgtaaagctgggtgagttgcaatctgatcagatccaggcgacgagcgtagaa
attaagagtaaaactaggagtagaagcaggggtaggacaaggaacaagactagcaagagt
cgaagtcgtagcagcagcactagtactagtagtagtagctcaaccagcagtagtagtggc
agcagttccagcagtggcagcagcagtagtcggagtagttccagcagcagcagtagcacg
agtggaagtagtagcagagacagtagcagcagtagcactagcagcagtgagagcagaagt
cgaagcagaggacggggtcataatagggatagaaagcacaggaggagcttggataggaag
cgaagggatgcttcaggactagacagaagtcacaagtcttcaaaaggtagtagcagagat
acaaaaggatcaaaggataaaagttcaaggtctgacagaaagaggtctgtgtcagaaaat
agtcggtcaggcaaaagaacttcacggagtgaaagagaccgtaaatcagacaggaaagac
aaaaggcgttaa
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