KEGG   Chelonia mydas (green sea turtle): 102945740
Entry
102945740         CDS       T02989                                 
Symbol
PNN
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03013  Nucleocytoplasmic transport
cmy03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102945740 (PNN)
   03015 mRNA surveillance pathway
    102945740 (PNN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmy03019]
    102945740 (PNN)
   03041 Spliceosome [BR:cmy03041]
    102945740 (PNN)
Messenger RNA biogenesis [BR:cmy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102945740 (PNN)
Spliceosome [BR:cmy03041]
 Complex C
  Other components
   EJC/TREX
    102945740 (PNN)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 102945740
NCBI-ProteinID: XP_007065299
LinkDB
Position
6:89865912..89878901
AA seq 783 aa
MGCGGVTPSWGSLIGRRVGRFLAVGGVVLRRGLVIGGRGWSVVGYWCHSGFELCDWRVTE
RDELPVGGASLPVTQRCFALGPWLGRAAGGMAVAVRALQEQLEKAKESLKHVDENIRKLT
GRDPNDVRPAQGRLLTITGPGGGRGRGSILLRRGFSDSGGPPAKQRDLEGATSRLGGERR
TRRESRHESDAEDEDVKKPALQSSVVATSKERTRRDLIQDQTMDEKGKQRNRRIFGLLMG
TLQKFKQESTVATERQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQTELRLLEQ
KVELAQLQEEWNEHNAKIIKYIRTRTRPHLFYIPGRMCPATQKLIDDSQKKMNAIFENRR
NEFAEQINKMEARPRRQSVKEKEQQEVHNEEKKEEQNKEQEEGKVAQQVEEMETGNQNND
VEMEEAGEEKVKIGAGHSDAEREQEEEEEQKHEIEDKVEERGEVKENDRQQDSQREEVMV
VREEGESSQPVDNEQDMMEMNEADSVEPLESENSKEVEPEAESEAQPAKELNADSPEKET
ANKPEIEAEPEEKQEKEPEAQPEPEAEIQPQPESVPLPQPPPLSQSIQDQEPRADQEEIA
AVSVKLGELQSDQIQATSVEIKSKTRSRSRGRTRNKTSKSRSRSSSTSTSSSSSTSSSSG
SSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSSTSSSESRSRSRGRGHNRDRKHRRSLDRK
RRDASGLDRSHKSSKGSSRDTKGSKDKSSRSDRKRSVSENSRSGKRTSRSERDRKSDRKD
KRR
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgggctgtgggggtgtcactccgtcatggggctctttaattggcagacgagtcgggcga
ttcttggcggtgggaggtgtcgttcttcgtcggggtttggtgattggcgggcgcggatgg
tcggtggttggctattggtgtcactctggctttgagctctgtgattggcgggttacagag
cgggacgagttgcctgtaggcggagcgtctctccccgttacccagcggtgctttgcgcta
ggcccctggctaggccgcgctgctggcgggatggcggtggcggtgcgcgcgctgcaggag
cagctggagaaggccaaggagagcctcaagcacgtggatgagaatatccgcaaactcacg
ggccgggaccccaacgatgtgaggcccgctcaaggtagattattgaccatcacaggccct
ggtggaggtagagggcgtggtagcatattgctaaggcgtggattctcggatagtggagga
cccccagccaaacagagggatcttgaaggggcaaccagtaggctgggtggggaacgtcgg
acaaggagagaatcacgccatgaaagcgacgcagaggatgaagatgttaaaaagccggcg
ttgcaatcttctgttgttgctacctccaaagagcgaacacgtcgagacctaattcaggat
caaactatggatgagaagggaaaacaaaggaatcgacgtatatttggcttgttgatgggc
actcttcagaaatttaaacaagaatccacagttgctactgagaggcaaaagagacgtcaa
gaaattgaacaaaagcttgaagtgcaggcagaggaggagagaaagcaggttgaaaatgag
aggcgagaattgtttgaagaaaggcgtgctaaacagacagaactgcgtctattggaacaa
aaggttgaacttgctcaactgcaagaagaatggaatgaacataatgccaaaataattaaa
tatataagaaccaggacaaggccccatctcttctatatacctggcaggatgtgtcccgct
acgcaaaagctaatagatgattcgcaaaaaaaaatgaatgcaatatttgaaaatagacgc
aatgagtttgcagaacaaattaacaaaatggaggccaggcccagaagacagtctgtaaag
gaaaaagaacagcaggaggtgcacaatgaagaaaagaaagaagagcagaacaaggagcag
gaagagggtaaggtggctcagcaggtggaagagatggagacaggtaaccagaacaatgat
gtagaaatggaggaggcaggggaggaaaaggtgaaaataggggcaggtcatagtgatgca
gagagagaacaggaggaggaggaggagcagaaacatgaaattgaggataaggtagaagag
agaggtgaggtgaaggagaatgacaggcagcaggatagtcagcgtgaagaggtcatggtt
gtaagagaggaaggtgagagttctcagccagtggataacgagcaggatatgatggagatg
aatgaggctgatagtgtagaaccattagaaagtgaaaatagcaaggaagtggaaccagaa
gctgagtctgaagctcagccagcaaaagagcttaacgctgattctcctgaaaaggagaca
gctaacaaaccagaaattgaagctgaacctgaagagaaacaggaaaaggagcctgaagcc
cagccagagcctgaggcagagatacagccccagccagagtctgtgccactgccacagcct
ccaccattgtctcagtccattcaagatcaagagcctcgggcagaccaggaggaaatcgct
gcggtgtctgtaaagctgggtgagttgcaatctgatcagatccaggcgacgagcgtagaa
attaagagtaaaactaggagtagaagcaggggtaggacaaggaacaagactagcaagagt
cgaagtcgtagcagcagcactagtactagtagtagtagctcaaccagcagtagtagtggc
agcagttccagcagtggcagcagcagtagtcggagtagttccagcagcagcagtagcacg
agtggaagtagtagcagagacagtagcagcagtagcactagcagcagtgagagcagaagt
cgaagcagaggacggggtcataatagggatagaaagcacaggaggagcttggataggaag
cgaagggatgcttcaggactagacagaagtcacaagtcttcaaaaggtagtagcagagat
acaaaaggatcaaaggataaaagttcaaggtctgacagaaagaggtctgtgtcagaaaat
agtcggtcaggcaaaagaacttcacggagtgaaagagaccgtaaatcagacaggaaagac
aaaaggcgttaa

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