Chelonia mydas (green sea turtle): 102946172
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Entry
102946172 CDS
T02989
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102946172 (SOX30)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102946172 (SOX30)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102946172
NCBI-ProteinID:
XP_037763859
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Position
8:3151564..3164197
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AA seq
732 aa
AA seq
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MEGGAQEEPPRQPHPPAGQEAPRSEHLLLHPLTRPGGREPPLLRLPPRPGPLHPLLPPLP
GQGAPSRELHPAKGQSPPSKPLPPPRAALGPGEQEGGSEPPRALQGKAEEQEQEGQLGCS
GCSKRKRGELKAAAARRAGKEGAQPAASGPVRRGGDQKGGHAEESQKEEMVKETGGDSVA
SGTGKEGAIKAEQAEAAGEDCKGREEAVSSKPAGSFSKDVPVAQPPGGFGAQHPQDLKIP
LTLHPVPSGTRIQFQGPPPSELIRVTKVPLAQVPLKMQSLLEPSVKIETKDVPLTVLPSD
AGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLTEE
QKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLTVSTVFPGTSQNIITTNPTTIYP
FRSPTYSVVIPSVQNSIGHPACEAPSTIQLPAPSIQHPGPITLFQPSVGNTTPVAVPAPN
LPLHPVIPPQRFAGPAQTEAHHVPSGSSCSVKRPIPVCIESSSRNPSNASTTHSRFPVSN
SQPPKEYSGVSTCPRSAPIPQAPPIPHSHLYQPPPIGHPATLFGAPPRFSFHHPYFLPGP
HYFPSSTCPYSRPPFGYGNFPSSMPECLGFYEDQYQKHEAMFSALNRDYPFREYPDERTQ
SEDSRSCESLEGVSYYNSHSHSEEEYLTPMPQLDIGALENVFTATPSTPSSIQQVNVTDS
DEEEEGKVLRDL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggggcgcaggaggagcccccccggcaaccgcaccccccagccgggcaggag
gcaccccgctcggagcaccttctcctgcaccccctcaccaggccggggggcagggagccg
cccctcctgcgcctcccgcccaggccggggcccctccacccgctcctgccccccctcccc
gggcagggcgcccccagcagggagctgcaccccgcaaaggggcagagtccccccagcaag
ccgctgccgccccccagggctgcgctggggcctggggagcaggaggggggcagtgagccc
ccccgggcgctgcagggaaaagcagaggagcaggagcaagagggccagctggggtgcagt
ggttgcagcaagagaaagaggggtgagctcaaggccgccgcagcccgacgagcagggaaa
gagggggcccagcccgcagccagcggccccgtcaggagaggaggggatcaaaaagggggg
cacgcagaggagagccagaaggaggagatggtgaaagagactgggggggacagcgtggcc
tcggggactgggaaagaaggagcaatcaaggccgagcaggcagaggcagccggtgaggac
tgcaaggggagggaagaagctgtgtcgtccaagccagctggatccttcagcaaagatgtc
cctgtggctcagccgcctggtgggtttggtgctcagcatcctcaagacctgaagatccca
ttgacactccatccagtaccctctgggaccaggatccagtttcagggacctccaccttct
gagctgatccgagtgactaaagtgcccctggcccaagtgccccttaaaatgcaatcctta
ctggagccttcagtcaaaattgaaactaaggatgtgcccctcacagtgctgccctctgat
gcagggataccagataccccatttagcaaagacagaaatggccatgtaaaacgtccaatg
aatgcatttatggtgtgggcaagaattcaccggccggcactagccaaagctaacccagct
gccaataatgcagaaatcagtgtccagcttggattagagtggaacaaactcactgaagag
caaaagaagccctattacgatgaagctcaaaagattaaagaaaagcacagagaagaattt
cctggctgggtttaccaaccacgacccggcaaaagaaaacgcttcccattgactgtctcc
actgtatttcccggcacctctcagaacatcatcactacaaacccaaccacaatttatcct
ttccgatcgcccacttactccgttgtcattcccagtgtacagaacagtattggacatcct
gcctgtgaagccccttctactatccagctgccagctccttccatacaacatccgggtcca
attacacttttccagccaagtgttggaaacaccacaccagtggctgtcccagctccaaat
ctgccccttcaccctgtaattccaccacagcgctttgctggacctgcacagacagaagct
catcatgtaccttccggatcaagttgttctgtaaagagacctatcccagtttgcattgag
agctccagcaggaacccaagtaatgccagcaccactcactccagatttcctgtttctaat
agtcaaccccctaaggagtactcaggtgtttctacttgtcctagaagtgctccaattccc
caggctcctcccattcctcactcacatctctatcaacctcctcccattggtcatccagcc
actctctttggagctcctcctcgattttcgtttcatcacccttacttcttacctggaccc
cactacttcccatcaagcacgtgcccgtacagccgccctccatttggctatgggaatttc
cccagctcaatgcccgaatgtcttggcttttacgaagaccagtaccaaaagcatgaggct
atgttttctgctctgaatagagactatcctttcagggagtacccagatgagcgcacacag
agtgaagattcccgcagctgtgagagcctagagggagtgtcttattacaacagccacagc
catagcgaggaggaatatttaacccccatgccacagctggatattggagccttggagaac
gttttcacagcaaccccatccacaccctctagcatccagcaagtcaatgtgactgacagc
gatgaggaggaggaggggaaagtgttaagagatttgtaa
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