Chelonia mydas (green sea turtle): 102946240
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Entry
102946240 CDS
T02989
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102946240 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102946240 (NDC1)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102946240 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
102946240
NCBI-ProteinID:
XP_037762015
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Position
8:93958385..93987346
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AA seq
690 aa
AA seq
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MRAGGGEQQALLRQVLGWRVAASIAWSILLLPLCTAVFISISSIDLFHPVQWISNSFNDW
YTSYVIFCILLMSVVILIISIFNVEFYAVVPSIPCSRLALLGKIIHPRQVIHSVVHAIMG
MLMAWCAAVMTKGKFQFLALPCTASESLDGAVQHMCLNEYHLFLLLSGAFMGYSYSLLYL
VNNMNYLPFPIIQQYKYLRFRRSLPLLVKRSCVESLYLVRNICVAYYFFGYIPRAWISTT
MDLHTDSKLHPLDTLTGLLDLSLLYHTWLCGIFLLITWHIAWLLFKIYATEAHHFPVQPT
FAEETDQCLPKILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAIS
KECLTLLSDLTQKLIMQQEAAATNGRVKQPSTGEVGRSLRSSGIFGWEKIHNSCCEAAVT
EEMAFQTQRYNVVSRAHIPSLVKSSLLPLKALSTSDLGSSFGSPLSSPALNHKAGILDLN
SPWHGSVQSPHVMRRGPKLWTSSSDLQMNGSPQASFPVISVARVGNEAIQPSFIYTWLQN
KQEQVRSFLSKRVLIMYFFSKHPEALIQAVFSDAQMHIWALEGLSRLVAASFTEDRFGVV
QTTLPAILNTLLTLQEVVDKHFKLPHASSKPPRISGSLMDTSYKTLRFALRASLKTAIYR
VTTTFGEHLNAVQVSAEHKKRLQQFLEFKE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagggcaggcggcggcgagcagcaagcgctgctcaggcaggttttgggttggcgagtg
gctgctagtattgcctggtcaatactactactacctctgtgtacggcagtcttcataagt
attagcagcattgacttgtttcatcctgtacaatggatttcaaattcattcaatgattgg
tatacttcctatgtcatcttttgtatccttcttatgtcagtggtgatactgataataagc
atcttcaatgttgaattttatgcagttgtgccttctattccctgctctcgattagcactg
ttaggaaagattattcacccacggcaagttatccattcagttgttcatgctataatggga
atgctgatggcatggtgtgctgcagttatgactaaggggaagttccagttccttgcttta
ccctgcacagcttcagaaagcctagatggtgctgttcaacacatgtgcctaaatgagtat
cacctcttcctcctgctgtctggagctttcatgggctacagttatagtctcttgtacctt
gttaacaatatgaactatttgccatttccaattatacagcaatacaagtatttacgtttc
agaagatctttgcccctgctggttaaacgtagttgtgtggaatcactgtacttggttaga
aacatctgtgttgcatattatttttttggttacattccaagagcatggataagtaccaca
atggaccttcatacagatagtaaacttcatcctcttgacacacttactggtcttctggat
ctatccttgctctaccatacctggttatgtggtatatttcttctcattacttggcacatt
gcatggctactcttcaaaatctatgctacagaggcacatcattttcctgttcaaccaact
tttgctgaggaaacagaccaatgcctgcctaaaatcttaaacagcaatcctccccttatt
ataaagttcttggccttacaggacttgatgttactttcccagtattctcctgtgcgacga
caagaggtcttcagcctcagtcagccaggtgggcatcctcacaactggacagcaatatca
aaagagtgcttgactcttttgagtgacttgacgcagaagctgattatgcagcaggaagct
gcagctacaaatgggagagtgaaacagccatctacaggagaagtaggaagatccctgaga
tcttcaggtatctttggatgggagaagattcacaatagctgttgtgaagcagctgttaca
gaagaaatggccttccagacacagagatataatgtcgtttcgagagcccacataccttcc
ctggttaaatcatccctcttgcctctaaaggcattgtctacatctgatcttggaagctct
tttggttcacctctcagttctcctgctctaaatcacaaggctggaattctggatttaaac
tctccttggcatggatcagtccaaagtcctcatgttatgagaagaggaccaaagctgtgg
acatcaagttcagatctgcaaatgaatggctctcctcaagcgtccttccctgtgatctct
gttgcaagagttggtaatgaagcaatacaaccaagctttatttatacatggctccagaac
aagcaagagcaggttaggagtttcttgtcaaaacgagtgctgataatgtatttcttcagc
aagcatccagaggccttgatccaggctgtcttttctgatgcccaaatgcacatttgggca
ttagaaggtctatctcgtttggtagctgcctcatttactgaagaccgatttggagttgtc
caaactacactgccagctattctgaataccttactgactcttcaggaggtggtagataag
catttcaagctgccccatgcttccagcaaaccacccaggatttcgggaagtctgatggat
acctcctacaaaacgctacgatttgcgcttagagcatccctgaaaactgcgatataccgg
gtcactactacttttggagaacatctaaatgcagttcaagtgtctgcagagcataagaaa
agacttcagcagttcttggagttcaaagaatag
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