KEGG   Chelonia mydas (green sea turtle): 102946240
Entry
102946240         CDS       T02989                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102946240 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmy03019]
    102946240 (NDC1)
Messenger RNA biogenesis [BR:cmy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102946240 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 102946240
NCBI-ProteinID: XP_037762015
LinkDB
Position
8:93958385..93987346
AA seq 690 aa
MRAGGGEQQALLRQVLGWRVAASIAWSILLLPLCTAVFISISSIDLFHPVQWISNSFNDW
YTSYVIFCILLMSVVILIISIFNVEFYAVVPSIPCSRLALLGKIIHPRQVIHSVVHAIMG
MLMAWCAAVMTKGKFQFLALPCTASESLDGAVQHMCLNEYHLFLLLSGAFMGYSYSLLYL
VNNMNYLPFPIIQQYKYLRFRRSLPLLVKRSCVESLYLVRNICVAYYFFGYIPRAWISTT
MDLHTDSKLHPLDTLTGLLDLSLLYHTWLCGIFLLITWHIAWLLFKIYATEAHHFPVQPT
FAEETDQCLPKILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAIS
KECLTLLSDLTQKLIMQQEAAATNGRVKQPSTGEVGRSLRSSGIFGWEKIHNSCCEAAVT
EEMAFQTQRYNVVSRAHIPSLVKSSLLPLKALSTSDLGSSFGSPLSSPALNHKAGILDLN
SPWHGSVQSPHVMRRGPKLWTSSSDLQMNGSPQASFPVISVARVGNEAIQPSFIYTWLQN
KQEQVRSFLSKRVLIMYFFSKHPEALIQAVFSDAQMHIWALEGLSRLVAASFTEDRFGVV
QTTLPAILNTLLTLQEVVDKHFKLPHASSKPPRISGSLMDTSYKTLRFALRASLKTAIYR
VTTTFGEHLNAVQVSAEHKKRLQQFLEFKE
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgagggcaggcggcggcgagcagcaagcgctgctcaggcaggttttgggttggcgagtg
gctgctagtattgcctggtcaatactactactacctctgtgtacggcagtcttcataagt
attagcagcattgacttgtttcatcctgtacaatggatttcaaattcattcaatgattgg
tatacttcctatgtcatcttttgtatccttcttatgtcagtggtgatactgataataagc
atcttcaatgttgaattttatgcagttgtgccttctattccctgctctcgattagcactg
ttaggaaagattattcacccacggcaagttatccattcagttgttcatgctataatggga
atgctgatggcatggtgtgctgcagttatgactaaggggaagttccagttccttgcttta
ccctgcacagcttcagaaagcctagatggtgctgttcaacacatgtgcctaaatgagtat
cacctcttcctcctgctgtctggagctttcatgggctacagttatagtctcttgtacctt
gttaacaatatgaactatttgccatttccaattatacagcaatacaagtatttacgtttc
agaagatctttgcccctgctggttaaacgtagttgtgtggaatcactgtacttggttaga
aacatctgtgttgcatattatttttttggttacattccaagagcatggataagtaccaca
atggaccttcatacagatagtaaacttcatcctcttgacacacttactggtcttctggat
ctatccttgctctaccatacctggttatgtggtatatttcttctcattacttggcacatt
gcatggctactcttcaaaatctatgctacagaggcacatcattttcctgttcaaccaact
tttgctgaggaaacagaccaatgcctgcctaaaatcttaaacagcaatcctccccttatt
ataaagttcttggccttacaggacttgatgttactttcccagtattctcctgtgcgacga
caagaggtcttcagcctcagtcagccaggtgggcatcctcacaactggacagcaatatca
aaagagtgcttgactcttttgagtgacttgacgcagaagctgattatgcagcaggaagct
gcagctacaaatgggagagtgaaacagccatctacaggagaagtaggaagatccctgaga
tcttcaggtatctttggatgggagaagattcacaatagctgttgtgaagcagctgttaca
gaagaaatggccttccagacacagagatataatgtcgtttcgagagcccacataccttcc
ctggttaaatcatccctcttgcctctaaaggcattgtctacatctgatcttggaagctct
tttggttcacctctcagttctcctgctctaaatcacaaggctggaattctggatttaaac
tctccttggcatggatcagtccaaagtcctcatgttatgagaagaggaccaaagctgtgg
acatcaagttcagatctgcaaatgaatggctctcctcaagcgtccttccctgtgatctct
gttgcaagagttggtaatgaagcaatacaaccaagctttatttatacatggctccagaac
aagcaagagcaggttaggagtttcttgtcaaaacgagtgctgataatgtatttcttcagc
aagcatccagaggccttgatccaggctgtcttttctgatgcccaaatgcacatttgggca
ttagaaggtctatctcgtttggtagctgcctcatttactgaagaccgatttggagttgtc
caaactacactgccagctattctgaataccttactgactcttcaggaggtggtagataag
catttcaagctgccccatgcttccagcaaaccacccaggatttcgggaagtctgatggat
acctcctacaaaacgctacgatttgcgcttagagcatccctgaaaactgcgatataccgg
gtcactactacttttggagaacatctaaatgcagttcaagtgtctgcagagcataagaaa
agacttcagcagttcttggagttcaaagaatag

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