Chelonia mydas (green sea turtle): 102946321
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Entry
102946321 CDS
T02989
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X6
KO
K06491
neural cell adhesion molecule
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cmy04514
Cell adhesion molecule (CAM) interaction
cmy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
102946321 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102946321 (NCAM1)
04517 IgSF CAM signaling
102946321 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102946321 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmy04515
]
102946321 (NCAM1)
04090 CD molecules [BR:
cmy04090
]
102946321 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
cmy00536
]
102946321 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cmy00537
]
102946321 (NCAM1)
04091 Lectins [BR:
cmy04091
]
102946321 (NCAM1)
Membrane trafficking [BR:
cmy04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
102946321 (NCAM1)
Cell adhesion molecules [BR:
cmy04515
]
Immunoglobulin superfamily
NCAM1/2
102946321 (NCAM1)
CD molecules [BR:
cmy04090
]
Proteins
102946321 (NCAM1)
Glycosaminoglycan binding proteins [BR:
cmy00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
102946321 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cmy00537
]
Others
102946321 (NCAM1)
Lectins [BR:
cmy04091
]
I-type lectins (Siglecs)
102946321 (NCAM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
C2-set_2
C1-set
Ig_C17orf99
Ig_6
C2-set_3
V-set_CD47
Fn3_ROS1
Ig_PDGFR_d4
Collagen_bind_2
DUF3149
Motif
Other DBs
NCBI-GeneID:
102946321
NCBI-ProteinID:
XP_027678694
LinkDB
All DBs
Position
22
Genome browser
AA seq
848 aa
AA seq
DB search
MLHTKDLIWTLFFLGAAVSLQVDIVPSQVEISVGESKFFLCQVTGEAKAKDISWFSPNGE
KLTPNQQRISVVRNDDFSSTLTIYSANIDDAGIYKCVVTSEEEGDSEATVNVKIFQKLMF
RNAPTPQEFQEGEDAVIVCDVLSSLPPTIMWKHKDRDVVLKKDVRFIVLPNNFLQIRGIK
KTDEGTYRCEGRILARGEVNFKDIQVIVNVPPSVRARQNTMNATANLSQSVTLVCDADGF
PEPAMRWMKDGDLIERGDDDEKYDFNYDGSELTIKKVEKSDEAEYTCIAENKAGKQDAII
HLKVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWRTSTRNISNEEKTLDGRIV
VHSHARVSSLTLKDIQYTDAGEYVCTASNTIGQDSQAMYLEVQYAPKLQGPVAVYTWEGN
QVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCT
AVNRIGQESSEFILVQADTPSSPSIDRVEPYSSTAQVEFDEPEATGGVPILKYKAEWRAR
GEEDWHSRWYDAKEANMEGMITIMGLKPETIYNIRLSAINGKGLGEISPVSEFKTQPVRE
PSAPKLEGQIGEDGNSIKVNLIKQDDGGSPIRHYLIKYKAKHSSDWKPEIRLPSGSDHVM
LKSLDWNAEYEVYVIAENQQGKSKPAHYAFRTSAQPTVIPASTSPTSGLGTAAIVGILIV
IFVLLLVAVDITCYFLNKCGLLMCIAVNLCGKSGPGAKGKDMEEGKAAFSKDESKEPIVE
VRTEEERTPNHDGGKHTEPNETTPLTEPEKTPVEEKSEVQATEPKTPPAEVKTVPNEATQ
TNENESKA
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatactaaggatctcatctggactctgtttttccttggagctgcagtgtctcta
caagtggatattgttccaagtcaggtggagatcagcgtaggagaatccaaattcttctta
tgtcaagtgactggggaagccaaagccaaagacatttcctggttctcccccaacggcgag
aagctgacgcccaaccagcagcgcatctcagtggtgcggaacgatgacttctcctccacc
ctcaccatttacagcgccaacatcgatgatgctggcatctacaagtgtgtcgtcaccagt
gaggaggagggcgactccgaggccaccgtcaacgtgaaaatcttccagaagctgatgttc
aggaatgctcccacccctcaggagttccaggagggggaagatgctgtgattgtgtgtgat
gtgctcagctcgctgcctcccaccattatgtggaagcataaggacagggacgttgtcctg
aaaaaagatgtccgatttatagtcctgcccaacaacttcctgcaaatccggggaatcaag
aaaacggatgaggggacgtaccgctgtgagggcagaatcctggctcgtggggaggtcaat
ttcaaggatattcaggtcattgtgaatgtgcctccttctgtccgtgccagacagaacacc
atgaatgctacggccaacctcagccagtctgtcaccttagtgtgcgatgctgatggcttt
cctgagccagccatgcgctggatgaaggatggggacctgatagaacggggggacgatgac
gagaaatatgacttcaactatgatggctccgagctgaccatcaagaaggtagagaagagc
gatgaggcagagtacacctgcatcgctgagaacaaggccggaaagcaggatgccattatc
cacctcaaagtcttcgcaaaacccaaaatcacttatgtggagaacaaaactgccatggaa
ctggaggaccagatcacactgacctgcgaggcttcaggggacccaatcccctccatcacc
tggagaacctccacccggaacatcagcaatgaagagaagactctggatgggcgcatagtg
gtgcacagccacgcccgagtgtcctccctgacgctcaaggacattcagtacacggatgct
ggagaatatgtgtgcacagccagcaacaccatcgggcaagactcccaggccatgtatctt
gaagtgcaatatgcccccaagctgcagggtcctgtggcagtctacacctgggaggggaat
caagtgaacatcacatgcgaggtgtttgcttaccccagtgctgtcatctcctggttccgg
gatggacagctgctaccaagctccaactacagtaacatcaagatctacaacaccccatca
gccagctacctggaggtgacaccggattccgagaatgactttgggaactataactgcacc
gcagtgaatcgcatcggccaggagtcctcagaattcatccttgtgcaagcagatactccg
tcctctccttccattgacagagtggagccctactccagcactgcccaggtggagttcgat
gagcccgaggccaccggtggggtgcccatcctcaagtataaggcagaatggagagcacgg
ggcgaggaggattggcattccaggtggtatgatgccaaagaagcaaacatggagggcatg
atcaccatcatgggcctgaagccagagacaatctataacatcagactgtcagccatcaac
ggcaaaggcctgggagagatcagtccggtgtctgagttcaagacccagccagttcgggaa
cccagcgcacccaaactggagggccagattggagaagacgggaactccattaaagtgaac
cttatcaagcaggatgatggaggctccccaatcagacactatctgatcaaatacaaagct
aagcattcctcagactggaaaccagagatcagactcccctctggcagcgaccacgtaatg
cttaagtccctagactggaatgcagagtacgaggtctacgtgatagctgagaaccagcaa
gggaaatccaagcctgcacactatgctttcaggacttcagctcagcctactgtaatccca
gccagcaccagccccacgtcaggcctcgggactgctgccatcgtgggcatcctcatcgtt
atctttgtgctgctcctggtggctgtggacatcacctgctacttcctgaacaagtgcggc
ctgctgatgtgcatcgctgtcaacctgtgcggcaagtccgggcctggggccaagggcaaa
gacatggaagagggcaaagctgccttctcaaaagacgagtcaaaggagcccattgtggag
gtgcggactgaggaggagcggaccccgaaccatgacgggggcaaacacacagagcccaac
gagaccacgccgctgacggagcctgagaaaacccctgtagaagaaaaatctgaggtgcaa
gcaacggaacctaagacacctccagcagaagtcaagacggtccccaacgaagccacacaa
acaaatgaaaacgagagcaaagcatga
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