Chelonia mydas (green sea turtle): 102946398
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Entry
102946398 CDS
T02989
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102946398 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cmy01007
]
102946398 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmy03016
]
102946398 (FARSB)
Enzymes [BR:
cmy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
102946398 (FARSB)
Amino acid related enzymes [BR:
cmy01007
]
Aminoacyl-tRNA synthetase
Class II (U)
102946398 (FARSB)
Transfer RNA biogenesis [BR:
cmy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102946398 (FARSB)
Prokaryotic type
102946398 (FARSB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
102946398
NCBI-ProteinID:
XP_007058247
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Position
9:36893749..36946793
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AA seq
622 aa
AA seq
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MLLDSPKAWLVWRSRGPSCGRRMRSAAVVQVCDMPTVSVKRELLFQALGRRYTDEEFDEL
CFEFGLELDEITSEKDIISKEQGDGKAEGASDIILYKIDVPANRYDLLCLEGLVRGLQVF
KERIKAPRYKRIMPVNVDVQRLIITEETAQVRPHAVAAVLRNITFSKDRYDSFIDLQEKL
HQNICRKRALVAIGTHDLDTISGPFTYTARPPSEIRFKPLNQSKEYTASEIMDLYRTDSQ
LKHYLHIIENKPLYPVIYDSNSVVLSMPPIINGDHTKISLNTRNVFVECTATDITKAKIV
LDILVTMFSEYCEKQFTVEAAEVTYFNGKTCIYPELAYRREKVKPDLINKKIGISETPSS
LAKLLTRMCLKSHVTGNGNNIEIEIPPTRADIIHACDIIEDAAIAYGYNNIQMTIPKTYT
IANQFPLNKLTELLRQDLAAAGFTEALTFALCSQEDIADKLGVDISSTKAVHIANPKTAE
FQVARTSLLPGLLKTIAANRKMPLPLKLFEISDVVLKDSTKDVGARNQRNLCAIYYNKNP
GFEVIHGLLDRVMQLLAVPPSKESGYLIKAAEDSAFFPGRCAEILAKGQSIGKLGVLHPD
VITKFELTMPCSALEINIEPFL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgctgttggacagtcccaaggcctggttagtgtggcggagtcgggggccttcctgcggg
cggcgcatgcgcagtgcggctgtagtgcaggtgtgtgacatgccgacggtcagtgtgaag
cgggagctgctcttccaggcgctgggcaggcgctatactgatgaagaatttgatgaactt
tgctttgagtttggtctggagcttgatgaaattacgtctgagaaggacataataagcaaa
gaacaaggtgatggaaaggcggagggtgcatcagatatcattctctataaaatcgatgtt
cctgctaaccgatatgatcttctttgtctggaaggattggtccgagggcttcaggtcttt
aaagaaaggataaaggcccctagatacaaaaggattatgccagtgaatgttgacgttcaa
aggctgattattactgaagagactgctcaagttcgtcctcatgctgtagctgcagtcctt
cgtaacataactttttccaaggatcgctatgatagtttcattgacttgcaagaaaaacta
catcagaacatctgcaggaaaagagcattagtagcaattggtacccatgacctggacacc
atctctggtccatttacttatacagctagacctccttcagaaattaggttcaagcccctg
aatcagtccaaggagtatactgcttctgaaattatggatctatataggactgacagccag
cttaagcattatttacacataattgaaaacaaaccactctatccagttatctatgatagc
aacagtgtcgttctttccatgccaccaattatcaatggagaccatacaaaaataagccta
aataccagaaatgtgtttgttgaatgcacagccactgatattacaaaggcaaaaattgtc
ctcgatatcttagtcacgatgtttagtgaatattgtgagaagcaattcacggttgaagca
gcagaggtaacttattttaatggaaaaacctgcatctatccagaactggcttacagaaga
gaaaaagtgaaacctgatttaattaacaagaaaattggaatcagtgaaacaccatcaagt
cttgcaaagctgctgaccaggatgtgtttgaagtcacatgtcacagggaatgggaacaat
atagaaattgaaatccctcctaccagagcggacattatccatgcatgtgatatcatagaa
gatgcagcaatagcttatggttataacaacattcagatgactattccaaaaacatacacc
atagccaatcaatttcctctcaataagctcacagaacttctgagacaggacttggcagct
gctggattcactgaagcactcacttttgcactgtgttcccaagaagatattgctgataaa
cttggtgtggacatctcttcaacaaaagcagtacacatagctaatcccaaaacagcagaa
tttcaggtggcacgcaccagcctcttgcctggcctcctgaagactattgctgctaataga
aagatgcctttgcctctgaaactttttgaaatctctgacgttgtcttaaaagattccacc
aaagatgtaggtgcaaggaaccagaggaatctctgtgccatttactacaacaagaacccc
gggtttgaggtcatccatgggttgctggatagagtcatgcagctgctggctgtgccacca
agcaaagagagtggatatctaatcaaggcagctgaagactctgctttcttccctggccgt
tgtgctgaaatccttgccaaaggtcaaagtattgggaagcttggagtccttcaccctgat
gttatcaccaaatttgagctcaccatgccatgctctgccctagagatcaatattgagccc
ttcttgtga
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