Chelonia mydas (green sea turtle): 102946600
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Entry
102946600 CDS
T02989
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X2
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04517
IgSF CAM signaling
cmy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102946600 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102946600 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmy04812
]
102946600 (SPTBN1)
Cytoskeleton proteins [BR:
cmy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102946600 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
102946600 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
102946600
NCBI-ProteinID:
XP_007072461
LinkDB
All DBs
Position
3
Genome browser
AA seq
2348 aa
AA seq
DB search
MELQKPTSMPGPLSPGYAAQVPYNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLARVSC
RITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENM
GSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNV
NIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDP
EDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASD
LLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKM
RANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAM
RETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVAKELETENY
HDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLLLS
QDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRV
AHMEFCYQELCQLAAERQARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDYGKDLTSI
VRLLSKHKAFEDEMSGRSGNFQQAIKEGEDMIAEEHFGSEKIRERIKDMREQWANLEQLS
AIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQSLVKKHKDVAEEI
ANYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRLRKQALQDTLALYK
MFSEADACELWIDEKEQWLNNMEIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIAR
QLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNYHLECNETKSWIRE
KTKVIESTQDLGNDLTGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKLESEHPDQAQAI
LSRLAEISDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNT
LTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNE
LHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQED
FMTTMDANEEKLNAVVETGRRLFSDGNINSDKIQEKVDSIDDRHRKNREAASELLMRLKD
NRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLEKI
EKEGMQLIAEKPETETVVKEKLTGLRQMWEELESTTQTKAQRLFDANKAELFTQSCADLD
KWLNSLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEVEELQSQAQALSQEGKST
DEVDGKRLIVQKKFLELLEPLTERKTNLLASKEVHQFNRDVEDEILWVGERMPIATSTDH
GHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNVITDSSLNAEALQQRLADLQQLW
NLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKKH
QILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAGLKDLAEERRGKL
DERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQER
VDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDA
KEIFGRIQDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVRQLQEDAARLQAAY
AGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQI
EAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQ
LTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEK
LIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPPSPEPSPKVPEDAD
SQQWDGTKGEQVSQNGLPSDQESPRMAETVETNEMVNGAAEQRTSSKESSPVPSPTADRK
AKTAIQAQTAATLPAKTQETPSAQMEGFLHRKHEWETHNKKASNRSWHNVYCVINNQEMG
FYKDSKAAASGIPYHSEIPISLKEAVCEIAVDYKKKKHVFKLRLTDGNEYLFQAKDDEEM
NTWIQAITSAISSDKIEVSPSTQSTPASSRAQTLPASVTITSESSPGKREKDKEKDKEKR
FSLFGKKK
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atggaattacaaaaaccaaccagtatgccagggccattgtccccaggttatgcagctcag
gtgccatataactataatcagttagaaggaagattcaagcagttacaagatgaacgagag
gcagttcagaagaagactttcacaaagtgggttaattcacatttggcacgtgtatcatgt
agaattacagatttatacactgatcttcgtgatggacggatgcttatcaaactgctggaa
gttctttcaggagaaagacttcccaaaccaaccaagggaaggatgcgcatccattgtttg
gagaatgttgataaagccctccagtttctgaaagaacaaagagtgcatctagaaaacatg
ggatcccatgatattgtggatgggaatcacaggctgactcttggccttatttggaccatt
attctgagattccagatccaagatatcagtgtcgaaactgaagacaacaaagagaagaaa
tctgctaaggatgctttgctcctgtggtgccagatgaagacagctggttaccccaacgtc
aacattcacaactttaccactagctggagggatgggatggctttcaacgcactaatccat
aaacacaggcctgatctgattgattttgacaagctgaagaaatcaaatgcacactacaat
ctgcagaatgcttttaacctggcagagcaacaccttggtctcactaagcttctggaccca
gaggatatcagtgttgaccatcctgatgaaaagtcaattatcacctatgtggtgacatat
taccactacttttctaagatgaaagctttagctgttgaaggaaaacgtattggaaaggtg
cttgacaatgctattgaaacagagaaaatgattgaaaaatatgaatcgctggcttctgac
cttcttgagtggattgaacaaacgattatcatcctgaacaatcgcaaatttgccaactca
ctggttggtgtgcaacagcagctacaggcattcaacacttaccgcacagtggagaaacca
cctaaatttacagaaaaaggaaacttagaagtactgcttttcaccatccaaagcaaaatg
agggctaacaatcagaaagtgtacatgccacgggagggcaaactcatctcggacattaac
aaggcctgggaaagactggaaaaagctgaacatgaaagagaactggcactgcgaaatgag
ctcataagacaagagaaactggaacaacttgcacgcagatttgatcgcaaggcagctatg
agagaaacttggctgagtgaaaatcaacgtctggtttctcaggataactttggttttgac
cttccagccgtggaggctgccactaaaaaacacgaggccattgaaacagacattgctgca
tatgaagaacgagtccaggcggtggttgctgttgcaaaggaacttgagactgagaattac
catgatatcaaacgcatcaccgcaagaaaagacaatgttatacgcctgtgggagtacctg
ctggagctactcagggcacgtagacaaagactggagatgaaccttggtctgcaaaagata
ttccaggaaatgctgtacattatggactggatggatgaaatgaaggtgcttctgctatct
caagactatggcaagcatttgttaggggtagaggacctgttacagaagcatgcactggtg
gaggcagacattgccattcaggctgaaagagtgcggggagtcaatgcatctgctcagaaa
tttgccacagatggagaaggttacaaaccatgtgatccacaagttatcagagatcgtgta
gctcatatggagttttgttatcaagagctatgccagttagcagccgaacgccaagctcgc
ttggaagaatccaggcgtctgtggaaattcttctgggaaatggcagaagaagagggctgg
atcagagaaaaggagcagatcttgtcatctgatgactatgggaaggacctaactagcatt
gtccgtctcttgagcaagcataaggcatttgaagatgaaatgagtggccgtagtggcaac
ttccagcaggcaataaaagaaggtgaagatatgattgctgaggagcactttgggtctgaa
aaaattagagagagaattaaggatatgcgagagcaatgggctaacctggagcagctgtct
gccattaggaagaaacgcctggaggaagcctctcttcttcatcagttccaagctgatgct
gatgatattgatgcatggatgttggacatcctcaaaattgtctccagcaatgatgttggc
cacgacgagtattctactcagtccttggtcaagaaacacaaagatgttgctgaagagatt
gcaaactataggccaaccattgactcactgcatgagcaagcaaaagctctgcctcaggaa
catgccgaatctccagatgttcaaggcaggttgtctggaatagaggaaagatacaaagag
gtcgctgaactgacacggctccgtaaacaagctctacaagatacccttgctctatataag
atgttcagtgaagcagatgcttgtgaactttggattgatgaaaaggagcagtggcttaac
aatatggagattccagagaagcttgaagacctggaagtgatccaacacagatttgaaagc
ttagaaccagaaatgaacaatcaggcatcccgtgttgcagtggtaaatcaaattgctaga
cagctgatgcacagtggtcatccaagtgaaaaggagatcaaggctcagcaagacaaactc
aatacaagatggagccagttcagggaactggtagacagaaagaaagatgctcttatctct
gctctaagtatccagaattaccatcttgagtgtaatgaaaccaaatcctggatcagggaa
aagaccaaagtaattgaatccacacaagatctgggcaatgatctgactggagtaatggcc
cttcagagaaagttgacgggtatggaacgtgatttggtagccattgaggctaagctaagt
gacctgcaaaaagaggctgaaaagttggaatctgaacatcctgaccaggctcaggccatc
ctgtcgaggcttgcagaaatcagcgatgtgtgggaagaaatgaaaactaccctcaagaac
cgggaagagtcccttggagaggcaagcaaactacagcagtttttgcgtgacctggacgac
ttccagtcctggctatccagaacccagactgcgattgcctcagaagacatgccaaacaca
ctgactgaggctgagaagctgctcactcagcatgagaatattaagaatgaaatcaacaat
tatgaggaagactaccagaaaatgagagacatgggcgagatggtaacccaaggacaaacc
gatgcacagtatatgttcttacgccagcgcctgcaggctttggacactgggtggaatgag
cttcacaaaatgtgggagaataggcaaaacctcctttcacagtctcacgcctaccagctg
tttctcagagacactaagcaagctgaagcatttcttaataaccaggaatatgttttggct
catactgaaatgcccactaccttggaaggagcagaagctgctattaaaaaacaggaggat
ttcatgaccacaatggatgccaatgaggaaaagctcaatgcagttgtagaaactggcagg
aggctctttagcgatgggaacattaactctgacaagatccaagagaaagtggactctatt
gatgacagacataggaagaatcgtgaggcagccagtgagcttctgatgaggttgaaagac
aacagagatcttcaaaagtttcttcaggactgccaggagctgtcactctggatcaatgag
aagatgctcacagctcaggatatgtcttatgatgaagcaaggaatctgcacagtaaatgg
ctaaaacaccaggcatttatggcagaacttgcatccaacaaagaatggctggagaaaatt
gaaaaggaagggatgcagctcattgcggagaaaccagagactgaaaccgtagtgaaagaa
aaactgacaggcctgcgtcaaatgtgggaggagctcgaatctactacccaaaccaaggct
cagcgactctttgatgcgaataaggctgagcttttcacccagagttgtgctgatttggat
aaatggctgaacagcttggagagtcagatacagtccgatgactatggaaaagatctcacc
agtgtcaacatcctgttgaaaaaacaacagatgcttgaaaaccaaatggatgttcgtaag
aaggaggtagaggagctgcaaagccaggcccaggctttgagtcaggagggcaagagtact
gatgaggtagatggcaaacgccttattgtacagaagaaatttttggagctactggaaccc
ttgactgaaaggaaaacgaacctgctggcctccaaagaggtccaccagttcaaccgggat
gttgaggatgaaattctgtgggtcggagagaggatgcctatagcaacatctaccgatcat
ggacataacctccagaccgtgcagctactgataaagaaaaatcagacacttcagaaggaa
atccaaggacatcagcctcgtatcgatgacatttttgagaggagccaaaacgttattaca
gacagcagccttaatgctgaagcgcttcagcagagacttgcagacttgcaacagctgtgg
aatctgctcattgaggagacagagaaacgccacaagcgcctggaggagtctcacaaagca
cagcagtattactttgatgctgcagaggctgaggcgtggatgagcgagcaggaactctat
atgatgtcggaagagaaagccaaggatgaacagagtgcagtgtccatgctgaagaaacac
cagattttggaacaggcagtagaagactatgccgagacagtgcaccagctttccaagact
agcagaactttggttgcagacaatcatccggaaagcgagcgtatcagtatgcgccagtcc
aaggtggataagctgtatgcaggcctgaaggatctagctgaagagaggaggggcaaacta
gacgagagacacaggctatttcagctcaatcgtgaggtggatgacttggagcagtggatt
gctgaaagggaggtggtggcaggatcccacgagctgggacaggattatgaacatgttaca
atgttacaagagcgattccgtgaatttgcccgggacactggaaacattggacaggagcgt
gttgatactgttaaccacatggcggatgagctcatcaattctggacactccgatgcagcc
accattgcagagtggaaggatggtctcaatgaggcatgggctgacctcttggagctcatt
gacacaagaacacagattctagcagcctcttatgaactacacaaattttaccatgatgcc
aaggagatctttggacgtattcaagataaacacaagaaactgcccgaggaacttggtaga
gaccaaaacacagtggaagcactacagaggatgcacacaacatttgaacatgatattcag
gctttaggcacccaggtgagacagctgcaagaggacgctgcacgccttcaggctgcctat
gctggggacaaggctgatgacatccagaagcgggagaacgaggtcctggaagcatggaaa
gcattgctggatgcctgcgagggacgcagggttagactggtggatacgggtgataaattt
cgtttcttcagcatggttcgtgatctcatgctctggatggaagacgttatccggcagatc
gaagcccaagagaagccaagggatgtttcatctgttgaattactaatgaacaatcaccag
ggtatcaaagcagaaattgacgcccgtaacgacagctttactacgtgcattgagcttggc
aaatcccttctggcaaggaaacactatgcatcagaagagatcaaggaaaagttattgcag
ttgacagagaagagaaaagaaatgattgacaaatgggaagacagatgggaatggctgaga
ctgattctggaagtacatcagttctcaagggatgctagtgtggctgaggcctggctgctg
ggacaggagccatacctatccagtcgtgagataggtcaaagtgtggatgaagtggaaaag
ttaattaagcggcatgaagcgtttgaaaaatctgcagctacttgggatgaaagattttca
gcactggaaagactgactacactggaattactggaagtacgtcgacagcaagaggaagag
gaaagaaagaggcagcctccttccccagagccaagcccaaaggttccagaagatgcagat
tcacaacagtgggatggtacaaaaggagaacaggtttcccaaaatggtttaccttcagac
caggagtctccacggatggcagaaactgtggaaacaaatgaaatggtcaatggagctgca
gaacagaggacaagttcaaaagagtctagtcctgttccttccccaactgcagaccgcaaa
gccaagactgccattcaggctcagactgcagctaccctaccagccaaaacacaagaaact
ccttcagctcagatggagggctttttgcatcgtaaacatgaatgggagacacataacaag
aaagcctcaaacagatcttggcacaatgtgtactgtgttataaacaaccaagagatgggc
ttctacaaagattccaaggctgctgcttctggcattccctaccacagtgagatccccatc
agcctgaaagaagcagtctgtgaaatagcggttgattacaaaaagaagaaacacgtgttc
aagctaagattaactgatggcaatgagtacctcttccaagccaaagatgatgaggaaatg
aacacatggattcaggccatcacatcagctatctcctctgacaaaattgaagtgtctcca
agcacacaaagcactccagcttctagtcgtgcccaaaccctgccagccagtgttacaata
accagcgaatccagtcctggcaagcgggagaaagacaaagagaaagacaaagaaaagaga
ttcagcctttttggcaaaaagaagtga
DBGET
integrated database retrieval system
