Chelonia mydas (green sea turtle): 102946600
Help
Entry
102946600 CDS
T02989
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X2
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102946600 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmy04812
]
102946600 (SPTBN1)
Cytoskeleton proteins [BR:
cmy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102946600 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
102946600 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
102946600
NCBI-ProteinID:
XP_007072461
LinkDB
All DBs
Position
3:complement(172163879..172375921)
Genome browser
AA seq
2348 aa
AA seq
DB search
MELQKPTSMPGPLSPGYAAQVPYNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLARVSC
RITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENM
GSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNV
NIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDP
EDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASD
LLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKM
RANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAM
RETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVAKELETENY
HDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLLLS
QDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRV
AHMEFCYQELCQLAAERQARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDYGKDLTSI
VRLLSKHKAFEDEMSGRSGNFQQAIKEGEDMIAEEHFGSEKIRERIKDMREQWANLEQLS
AIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQSLVKKHKDVAEEI
ANYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRLRKQALQDTLALYK
MFSEADACELWIDEKEQWLNNMEIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIAR
QLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNYHLECNETKSWIRE
KTKVIESTQDLGNDLTGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKLESEHPDQAQAI
LSRLAEISDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNT
LTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNE
LHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQED
FMTTMDANEEKLNAVVETGRRLFSDGNINSDKIQEKVDSIDDRHRKNREAASELLMRLKD
NRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLEKI
EKEGMQLIAEKPETETVVKEKLTGLRQMWEELESTTQTKAQRLFDANKAELFTQSCADLD
KWLNSLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEVEELQSQAQALSQEGKST
DEVDGKRLIVQKKFLELLEPLTERKTNLLASKEVHQFNRDVEDEILWVGERMPIATSTDH
GHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNVITDSSLNAEALQQRLADLQQLW
NLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKKH
QILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAGLKDLAEERRGKL
DERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQER
VDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDA
KEIFGRIQDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVRQLQEDAARLQAAY
AGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQI
EAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQ
LTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEK
LIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPPSPEPSPKVPEDAD
SQQWDGTKGEQVSQNGLPSDQESPRMAETVETNEMVNGAAEQRTSSKESSPVPSPTADRK
AKTAIQAQTAATLPAKTQETPSAQMEGFLHRKHEWETHNKKASNRSWHNVYCVINNQEMG
FYKDSKAAASGIPYHSEIPISLKEAVCEIAVDYKKKKHVFKLRLTDGNEYLFQAKDDEEM
NTWIQAITSAISSDKIEVSPSTQSTPASSRAQTLPASVTITSESSPGKREKDKEKDKEKR
FSLFGKKK
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atggaattacaaaaaccaaccagtatgccagggccattgtccccaggttatgcagctcag
gtgccatataactataatcagttagaaggaagattcaagcagttacaagatgaacgagag
gcagttcagaagaagactttcacaaagtgggttaattcacatttggcacgtgtatcatgt
agaattacagatttatacactgatcttcgtgatggacggatgcttatcaaactgctggaa
gttctttcaggagaaagacttcccaaaccaaccaagggaaggatgcgcatccattgtttg
gagaatgttgataaagccctccagtttctgaaagaacaaagagtgcatctagaaaacatg
ggatcccatgatattgtggatgggaatcacaggctgactcttggccttatttggaccatt
attctgagattccagatccaagatatcagtgtcgaaactgaagacaacaaagagaagaaa
tctgctaaggatgctttgctcctgtggtgccagatgaagacagctggttaccccaacgtc
aacattcacaactttaccactagctggagggatgggatggctttcaacgcactaatccat
aaacacaggcctgatctgattgattttgacaagctgaagaaatcaaatgcacactacaat
ctgcagaatgcttttaacctggcagagcaacaccttggtctcactaagcttctggaccca
gaggatatcagtgttgaccatcctgatgaaaagtcaattatcacctatgtggtgacatat
taccactacttttctaagatgaaagctttagctgttgaaggaaaacgtattggaaaggtg
cttgacaatgctattgaaacagagaaaatgattgaaaaatatgaatcgctggcttctgac
cttcttgagtggattgaacaaacgattatcatcctgaacaatcgcaaatttgccaactca
ctggttggtgtgcaacagcagctacaggcattcaacacttaccgcacagtggagaaacca
cctaaatttacagaaaaaggaaacttagaagtactgcttttcaccatccaaagcaaaatg
agggctaacaatcagaaagtgtacatgccacgggagggcaaactcatctcggacattaac
aaggcctgggaaagactggaaaaagctgaacatgaaagagaactggcactgcgaaatgag
ctcataagacaagagaaactggaacaacttgcacgcagatttgatcgcaaggcagctatg
agagaaacttggctgagtgaaaatcaacgtctggtttctcaggataactttggttttgac
cttccagccgtggaggctgccactaaaaaacacgaggccattgaaacagacattgctgca
tatgaagaacgagtccaggcggtggttgctgttgcaaaggaacttgagactgagaattac
catgatatcaaacgcatcaccgcaagaaaagacaatgttatacgcctgtgggagtacctg
ctggagctactcagggcacgtagacaaagactggagatgaaccttggtctgcaaaagata
ttccaggaaatgctgtacattatggactggatggatgaaatgaaggtgcttctgctatct
caagactatggcaagcatttgttaggggtagaggacctgttacagaagcatgcactggtg
gaggcagacattgccattcaggctgaaagagtgcggggagtcaatgcatctgctcagaaa
tttgccacagatggagaaggttacaaaccatgtgatccacaagttatcagagatcgtgta
gctcatatggagttttgttatcaagagctatgccagttagcagccgaacgccaagctcgc
ttggaagaatccaggcgtctgtggaaattcttctgggaaatggcagaagaagagggctgg
atcagagaaaaggagcagatcttgtcatctgatgactatgggaaggacctaactagcatt
gtccgtctcttgagcaagcataaggcatttgaagatgaaatgagtggccgtagtggcaac
ttccagcaggcaataaaagaaggtgaagatatgattgctgaggagcactttgggtctgaa
aaaattagagagagaattaaggatatgcgagagcaatgggctaacctggagcagctgtct
gccattaggaagaaacgcctggaggaagcctctcttcttcatcagttccaagctgatgct
gatgatattgatgcatggatgttggacatcctcaaaattgtctccagcaatgatgttggc
cacgacgagtattctactcagtccttggtcaagaaacacaaagatgttgctgaagagatt
gcaaactataggccaaccattgactcactgcatgagcaagcaaaagctctgcctcaggaa
catgccgaatctccagatgttcaaggcaggttgtctggaatagaggaaagatacaaagag
gtcgctgaactgacacggctccgtaaacaagctctacaagatacccttgctctatataag
atgttcagtgaagcagatgcttgtgaactttggattgatgaaaaggagcagtggcttaac
aatatggagattccagagaagcttgaagacctggaagtgatccaacacagatttgaaagc
ttagaaccagaaatgaacaatcaggcatcccgtgttgcagtggtaaatcaaattgctaga
cagctgatgcacagtggtcatccaagtgaaaaggagatcaaggctcagcaagacaaactc
aatacaagatggagccagttcagggaactggtagacagaaagaaagatgctcttatctct
gctctaagtatccagaattaccatcttgagtgtaatgaaaccaaatcctggatcagggaa
aagaccaaagtaattgaatccacacaagatctgggcaatgatctgactggagtaatggcc
cttcagagaaagttgacgggtatggaacgtgatttggtagccattgaggctaagctaagt
gacctgcaaaaagaggctgaaaagttggaatctgaacatcctgaccaggctcaggccatc
ctgtcgaggcttgcagaaatcagcgatgtgtgggaagaaatgaaaactaccctcaagaac
cgggaagagtcccttggagaggcaagcaaactacagcagtttttgcgtgacctggacgac
ttccagtcctggctatccagaacccagactgcgattgcctcagaagacatgccaaacaca
ctgactgaggctgagaagctgctcactcagcatgagaatattaagaatgaaatcaacaat
tatgaggaagactaccagaaaatgagagacatgggcgagatggtaacccaaggacaaacc
gatgcacagtatatgttcttacgccagcgcctgcaggctttggacactgggtggaatgag
cttcacaaaatgtgggagaataggcaaaacctcctttcacagtctcacgcctaccagctg
tttctcagagacactaagcaagctgaagcatttcttaataaccaggaatatgttttggct
catactgaaatgcccactaccttggaaggagcagaagctgctattaaaaaacaggaggat
ttcatgaccacaatggatgccaatgaggaaaagctcaatgcagttgtagaaactggcagg
aggctctttagcgatgggaacattaactctgacaagatccaagagaaagtggactctatt
gatgacagacataggaagaatcgtgaggcagccagtgagcttctgatgaggttgaaagac
aacagagatcttcaaaagtttcttcaggactgccaggagctgtcactctggatcaatgag
aagatgctcacagctcaggatatgtcttatgatgaagcaaggaatctgcacagtaaatgg
ctaaaacaccaggcatttatggcagaacttgcatccaacaaagaatggctggagaaaatt
gaaaaggaagggatgcagctcattgcggagaaaccagagactgaaaccgtagtgaaagaa
aaactgacaggcctgcgtcaaatgtgggaggagctcgaatctactacccaaaccaaggct
cagcgactctttgatgcgaataaggctgagcttttcacccagagttgtgctgatttggat
aaatggctgaacagcttggagagtcagatacagtccgatgactatggaaaagatctcacc
agtgtcaacatcctgttgaaaaaacaacagatgcttgaaaaccaaatggatgttcgtaag
aaggaggtagaggagctgcaaagccaggcccaggctttgagtcaggagggcaagagtact
gatgaggtagatggcaaacgccttattgtacagaagaaatttttggagctactggaaccc
ttgactgaaaggaaaacgaacctgctggcctccaaagaggtccaccagttcaaccgggat
gttgaggatgaaattctgtgggtcggagagaggatgcctatagcaacatctaccgatcat
ggacataacctccagaccgtgcagctactgataaagaaaaatcagacacttcagaaggaa
atccaaggacatcagcctcgtatcgatgacatttttgagaggagccaaaacgttattaca
gacagcagccttaatgctgaagcgcttcagcagagacttgcagacttgcaacagctgtgg
aatctgctcattgaggagacagagaaacgccacaagcgcctggaggagtctcacaaagca
cagcagtattactttgatgctgcagaggctgaggcgtggatgagcgagcaggaactctat
atgatgtcggaagagaaagccaaggatgaacagagtgcagtgtccatgctgaagaaacac
cagattttggaacaggcagtagaagactatgccgagacagtgcaccagctttccaagact
agcagaactttggttgcagacaatcatccggaaagcgagcgtatcagtatgcgccagtcc
aaggtggataagctgtatgcaggcctgaaggatctagctgaagagaggaggggcaaacta
gacgagagacacaggctatttcagctcaatcgtgaggtggatgacttggagcagtggatt
gctgaaagggaggtggtggcaggatcccacgagctgggacaggattatgaacatgttaca
atgttacaagagcgattccgtgaatttgcccgggacactggaaacattggacaggagcgt
gttgatactgttaaccacatggcggatgagctcatcaattctggacactccgatgcagcc
accattgcagagtggaaggatggtctcaatgaggcatgggctgacctcttggagctcatt
gacacaagaacacagattctagcagcctcttatgaactacacaaattttaccatgatgcc
aaggagatctttggacgtattcaagataaacacaagaaactgcccgaggaacttggtaga
gaccaaaacacagtggaagcactacagaggatgcacacaacatttgaacatgatattcag
gctttaggcacccaggtgagacagctgcaagaggacgctgcacgccttcaggctgcctat
gctggggacaaggctgatgacatccagaagcgggagaacgaggtcctggaagcatggaaa
gcattgctggatgcctgcgagggacgcagggttagactggtggatacgggtgataaattt
cgtttcttcagcatggttcgtgatctcatgctctggatggaagacgttatccggcagatc
gaagcccaagagaagccaagggatgtttcatctgttgaattactaatgaacaatcaccag
ggtatcaaagcagaaattgacgcccgtaacgacagctttactacgtgcattgagcttggc
aaatcccttctggcaaggaaacactatgcatcagaagagatcaaggaaaagttattgcag
ttgacagagaagagaaaagaaatgattgacaaatgggaagacagatgggaatggctgaga
ctgattctggaagtacatcagttctcaagggatgctagtgtggctgaggcctggctgctg
ggacaggagccatacctatccagtcgtgagataggtcaaagtgtggatgaagtggaaaag
ttaattaagcggcatgaagcgtttgaaaaatctgcagctacttgggatgaaagattttca
gcactggaaagactgactacactggaattactggaagtacgtcgacagcaagaggaagag
gaaagaaagaggcagcctccttccccagagccaagcccaaaggttccagaagatgcagat
tcacaacagtgggatggtacaaaaggagaacaggtttcccaaaatggtttaccttcagac
caggagtctccacggatggcagaaactgtggaaacaaatgaaatggtcaatggagctgca
gaacagaggacaagttcaaaagagtctagtcctgttccttccccaactgcagaccgcaaa
gccaagactgccattcaggctcagactgcagctaccctaccagccaaaacacaagaaact
ccttcagctcagatggagggctttttgcatcgtaaacatgaatgggagacacataacaag
aaagcctcaaacagatcttggcacaatgtgtactgtgttataaacaaccaagagatgggc
ttctacaaagattccaaggctgctgcttctggcattccctaccacagtgagatccccatc
agcctgaaagaagcagtctgtgaaatagcggttgattacaaaaagaagaaacacgtgttc
aagctaagattaactgatggcaatgagtacctcttccaagccaaagatgatgaggaaatg
aacacatggattcaggccatcacatcagctatctcctctgacaaaattgaagtgtctcca
agcacacaaagcactccagcttctagtcgtgcccaaaccctgccagccagtgttacaata
accagcgaatccagtcctggcaagcgggagaaagacaaagagaaagacaaagaaaagaga
ttcagcctttttggcaaaaagaagtga
DBGET
integrated database retrieval system
