Chelonia mydas (green sea turtle): 102946620
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Entry
102946620 CDS
T02989
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102946620 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmy03041
]
102946620 (DHX15)
03009 Ribosome biogenesis [BR:
cmy03009
]
102946620 (DHX15)
Enzymes [BR:
cmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102946620 (DHX15)
Spliceosome [BR:
cmy03041
]
Complex A
U2 snRNP components
U2 related factors
102946620 (DHX15)
Complex B
102946620 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
102946620 (DHX15)
Ribosome biogenesis [BR:
cmy03009
]
Eukaryotic type
90S particles
Helicases
102946620 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_29
AAA_25
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
102946620
NCBI-ProteinID:
XP_027676377
LinkDB
All DBs
Position
4:106661054..106731842
Genome browser
AA seq
766 aa
AA seq
DB search
MSKRHRLDLGDDYSSNKKRATADGKDRDRDRDREDRSKDRDRDRDRERDRDRERDKEKDL
RPSSNSMLLVGGGLPPLKPAILPQGINPFTNLPHTPRYYEILKKRLQLPVWEYKERFTDI
LIRNQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEM
DVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLAT
DILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPER
DYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLY
STLPPQQQQRIFEPPPPKKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNP
RIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGS
VVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDP
QLAKMVIASCDYNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLN
VYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINI
RKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRT
CTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccatcgcctagatctgggggacgactacagctccaacaagaagcgcgcc
acggctgacgggaaggaccgggatcgtgaccgggatcgagaagatcgttctaaagaccgt
gacagggatcgtgacagagagagagatcgtgacagagagagagacaaggaaaaagatttg
cgtccttcatctaattctatgctgcttgttggtggtggattaccacctttaaaaccagca
atacttccacagggtattaatccattcacaaacctaccacatacacctcgatactatgaa
atcctaaagaagcggcttcagctccctgtctgggagtataaggaaagatttacagatatc
ctgatcaggaatcaatcttttgtactggttggagagaccgggtctggtaaaacgacacag
atccctcagtggtgtgttgactacatgcggtctttacctggacctaagagaggtgtagct
tgtacccagcctaggagggtagctgcaatgagtgtggcacaacgagttgctgatgaaatg
gatgtgatgttgggccaggaagttggttactcgattcgatttgaagattgcagtagtgca
aaaacaattctgaagtatatgactgatggtatgttacttcgtgaagctatgaatgaccct
ttgctggagcgctatggtgttataattcttgacgaggcccatgaaagaacattggctact
gatattttgatgggagttctgaaagaagttgtaaggcaaagatctgacttgaaggttata
gttatgagtgctactctagatgctggcaaattccagatttattttgataattgtcctctc
ctaactatccctggtcgtacccatcctgtggagattttctatactccagagccagagagg
gattaccttgaggcggctattcgaacagtaatccagattcacatgtgtgaagaagaggag
ggagatcttctactctttcttactggacaagaggagattgatgaagcctgtaagaggata
aagcgtgaaattgatgatttgggtcctgaagtgggtgacatcaaaatcattccattatat
tccacgcttcccccacagcagcaacagaggatttttgaacctcctcctcctaaaaaacca
agtggagcaataggaagaaaggttgtcgtatccactaatattgctgaaacatcattaaca
atagatggtgttgtgtttgttattgatcctggatttgctaagcaaaaggtatacaatcct
cgtattagagttgaatctctgttggtgacagcgatcagcaaagcatctgctcagcagaga
gctggccgtgctggtcgtactaggccaggcaagtgcttcaggctttatacggagaaagcg
tacaaaactgaaatgcaggacaacacctatcctgaaattctgagatccaacttgggatct
gtggtgttacaactgaagaaacttggtatagatgacttggtgcactttgattttatggac
ccaccagctcctgaaactctgatgagagccctagagcttttgaattatctagctgcttta
aatgatgatggagacctgactgaattgggatccatgatggctgaatttccactggatcca
cagctggctaaaatggttattgcaagttgtgactacaactgttctaatgagatcctatct
attactgccatgttgtcagtcccacagtgttttgttcgccccacggaagccaagaaagca
gcagatgaagccaagatgaggtttgcccacatagatggagatcatttgaccttgctgaat
gtctaccacgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcatt
aactacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggat
agatttaatttgcctcgtagaagcacagactttacaagcagagactattatatcaatata
agaaaggctttggttactgggtattttatgcaggtggcacatttggagcgaacagggcat
tacttaacagtgaaggacaaccaggtggtgcagttacatccttccacagttcttgatcac
aaacctgaatgggtgctttataatgaatttgtccttactacaaagaattacatccgcaca
tgtacagatatcaagccagaatggttggtgaaaattgcccctcaatattatgacatgagc
aatttcccacagtgtgaagcaaagagacagttggaccgcatcattgccaaacttcagtcg
aaggaatactcacagtactga
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