Chelonia mydas (green sea turtle): 102946624
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Entry
102946624 CDS
T02989
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmy03036
]
102946624 (TDRD12)
Enzymes [BR:
cmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
102946624 (TDRD12)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102946624 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
102946624
NCBI-ProteinID:
XP_037733894
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All DBs
Position
12:22457488..22578505
Genome browser
AA seq
1259 aa
AA seq
DB search
MKMIEVLILKIEDPGCFWVFVKGCGPFVDSEMEYKKLHAEMNQFYNRDVEEVKPLTLEEG
QVCVVFCQELKCWCRAVVKSILFCADHYLAECFLVDYAKYIPVKTKNIRVAVEAFMQLPY
RAKKFRLYCTKPVTLCIDFCEDAAEIVPAKRWDSAAIQYFQNLLIGTTQIEAKLCAIEDD
IFDVYLYVTIKDEKVCVNDDLVAKNFAHYVMTKENTVNFAKSQKPWSSLSLKSSPEKVIN
PALALWPMLMQGKVHNNLSTGDDASNSFLEKTCRKIAAPALNGKTESTVRATVGLSFKEN
INISVQPTVQVNRLLQFLNPDPLKTDDVHYEQQEFQKINTEQPPIVLSNKIEPRSTLETT
PLLVDLKKELLRNKFLGPNLTESYCWPPIARGCDSVVISHHGNDPFLYIPPILTFLQSGS
CYKSLPTRNGPIALIVCPGWRKAQLVFELLEKYGRCSRPLHPVLILLGLNKEEAKNMKLQ
RGCEVIVTTPHSLLRLLEHHSLLFLRLCHLVFDEVDNLFSEASKQIFTILEYYKKTITVE
ERESAPHQIVAVGNHWNKHIEHLTREFMSDPYIVITAMEEASIYGNVQQVVQLCLNCERT
SVLLQILDFTPSKTQKTLIFTNSVDETEMVYKAVESSSIFCLKVHKQIEFHFKYAVEQWK
KKFSSGTHVVLVLTDDCMPSLGITDATCVVHFSFPASPRVFGVRLHSMSDNFQNVLKQGS
SVEQVYTKAKSILLLTERNGCHAVGVLRYLEHTEAKIPPELCDFTAGVLEAKEDMKLARP
LCQYLKRSGVCKDMRICPDRHRVHLQIDLPQKMSDNIIPMAGCVTIVPLHIVDATNYFGR
IIDKQKDQYAILAGEMIEYFKKARNKVCVEMVEKLALYGLHKEGLFHRVQVLEIPPKEEN
SFFCNVTIRYIDEGRTGQVQVHQLFHLPTRFQILPPQAVEFIVCRVKPIDNEIEWNPKVT
RYIHHKIRGKLHEAKIVLALGNTIWVDPMVRVTRLSDLKTSINEYNIRSEILSMGMGTDN
PEHIKQLQKLCKHAKMLALEEKTLQTLVLSFTPKRSVLEQDVDSRRIVPEQDVASPHSLL
MGENFTDICNSSQMILENNQCDAIAELKAEESTQHHRKCFYPEIKWFQKEDIVTMKIKIR
NIRDYKCEFFGDKVVFSAFSGDKFYVADMELHANILKGKSVCVIKNEEPVLILAKDKKEF
WCRLLKHKNPNVSFDFEHWEDFEDKSPFPVGTQKAHHSAALITEEMEESSEDSGTESDD
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgattgaagtcttgatattgaagattgaagacccaggctgcttttgggtcttt
gtaaaaggatgcgggccttttgtagacagtgaaatggaatataaaaaactgcatgctgaa
atgaatcagttctataaccgagatgtggaggaagtaaagccattaacattagaagaagga
caggtttgtgtggttttttgtcaggaactgaaatgctggtgtagagcagttgttaagtca
atcctgttctgtgctgatcattacctagcagagtgtttccttgtggattatgccaagtat
attcctgttaaaacaaaaaacattcgggttgcagtggaagcatttatgcaactcccatat
agagcgaaaaagtttagactgtactgcacaaagccagtcacgttgtgtatagatttctgt
gaagatgctgcagaaatagtacctgcaaagcgatgggacagtgctgctattcagtacttt
caaaaccttctaataggaaccacccagattgaggcgaagttatgtgcaatagaagatgac
atttttgatgtttatctttacgtaacaataaaagatgaaaaggtatgtgttaatgatgat
cttgttgcaaagaactttgctcattatgtgatgactaaagaaaacacagttaattttgcc
aaaagccaaaagccatggtcctcattaagtctgaagtcttctccagagaaagtgatcaat
cctgcacttgctctttggccaatgttaatgcaggggaaggtacacaataatctttcaaca
ggtgatgatgcttctaattcttttcttgaaaagacatgcagaaaaattgctgcacctgct
cttaatggaaaaactgagtctactgtcagagcaactgtgggtttgtcttttaaagaaaat
ataaatatttctgtgcagcctactgtgcaggtaaacaggctcctgcagtttttgaatcct
gatccgttgaaaactgatgatgttcattatgagcagcaggagtttcaaaagatcaataca
gaacaacctcctattgttctcagcaacaaaatagagccacgttcaactcttgaaacaaca
ccacttttggtagatctgaaaaaggagcttctccggaataaatttctaggtcctaatctc
acagaatcttactgttggccaccaatagctcgtggatgtgattcagttgtcatttctcat
catggaaatgatccttttttgtatattccacccattcttacatttttacaatcagggagc
tgctacaagtctctgccaactaggaatggaccaatagcattaatcgtatgtcctgggtgg
aggaaagcacaacttgtttttgaattattggaaaaatatggcagatgctccaggccactt
catccagtgttgatattattaggactgaataaagaagaagccaaaaatatgaaacttcaa
agaggatgtgaagtgattgtaactacaccacacagccttttgagactgcttgaacaccat
agcttattatttcttagactttgtcatcttgtttttgatgaagttgataacttgttctct
gaagctagcaaacaaatatttactatattagagtattacaagaaaacaattactgttgaa
gagcgggaatcagcaccacatcaaattgttgctgttggaaatcattggaataaacatata
gaacatttaacaagagagttcatgagtgatccttacattgtgataacagctatggaagaa
gcttccatatatggaaatgtgcaacaggtggtgcaactttgcttgaactgtgagagaacc
tctgtattactccagatactggattttactcccagtaaaactcaaaagaccctgattttc
actaattctgtggatgaaacagaaatggtctataaagcagtggagagtagttccatattc
tgcttgaaagtacacaaacaaattgaatttcatttcaaatatgccgtagagcaatggaaa
aaaaaatttagttctggcacccatgttgtgttagttttaactgatgactgcatgccgtcc
ttgggaattactgatgcaacttgtgtggttcattttagttttcctgcttctccaagagtc
tttggtgtgcgcttacacagcatgtctgataacttccagaatgtactaaaacagggttcc
tctgtagagcaagtatatacaaaggcaaaatcaatcttattgctgacagaaagaaatgga
tgccatgcagttggtgtactgcgttatttagaacacacagaagctaaaattccaccggaa
ctgtgtgactttacagcgggggtgcttgaggctaaagaagatatgaaacttgcaaggcct
ctttgtcagtaccttaaaagatctggtgtttgcaaggatatgcgaatatgtccagatcgt
catcgagttcacttacaaatagacttaccccaaaagatgtcagataacattataccaatg
gctggatgtgtcacaatagtacctctccacattgtggatgcaacaaactacttcggtcgc
ataatagataaacaaaaggatcaatatgcaattcttgctggagagatgattgagtatttt
aagaaagctaggaataaagtgtgcgttgaaatggtggagaaactagcactgtatggatta
cacaaagaaggtctttttcacagggttcaagtgttggagatacccccaaaagaagaaaat
agtttcttctgtaatgttactatcaggtatatagatgaaggcagaactggtcaagttcaa
gttcatcagctgtttcacttacctacaagatttcaaattttgccaccacaggctgtggaa
tttattgtttgtagggtaaaacctattgataatgaaattgaatggaaccctaaggttact
agatatattcatcacaaaatcagaggaaaacttcatgaagcaaaaatagtgcttgccttg
ggaaatacaatttgggttgatccaatggtccgggtcaccaggctttcagatttgaagact
tctatcaacgaatataatattcgatctgagattttgtctatgggtatgggaactgacaat
ccagaacatataaaacaacttcaaaagttgtgtaaacatgcaaaaatgttagctcttgag
gagaaaaccttgcaaactttagtgctctcttttacacccaaaagaagtgtgctggagcag
gatgtggacagccgacggattgtgccggaacaggacgtggccagtccacatagcttatta
atgggagaaaatttcacagacatttgcaatagctctcaaatgattttggaaaataatcag
tgtgatgctatagctgaacttaaagcagaagaatctacacagcatcatcgtaaatgtttc
tatccagaaataaaatggtttcaaaaggaagatattgttaccatgaagataaaaataaga
aatatacgtgactataaatgtgaattttttggagataaggttgttttcagtgctttttca
ggagacaaattttatgtggctgacatggagttgcatgcaaacatacttaaaggaaagtcc
gtttgtgtgattaagaatgaagaacctgttcttatccttgcaaaagacaagaaggaattt
tggtgccgtctactaaagcataagaatcctaatgtgtcttttgattttgaacactgggaa
gattttgaagataaaagcccctttcctgttggtacacaaaaagcacatcattctgctgca
ttgataacagaagaaatggaagaatcctcagaagatagtggaacagagagtgatgactag
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