Chelonia mydas (green sea turtle): 102947237
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Entry
102947237 CDS
T02989
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102947237 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cmy01007
]
102947237 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmy03016
]
102947237 (KARS1)
Enzymes [BR:
cmy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
102947237 (KARS1)
Amino acid related enzymes [BR:
cmy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
102947237 (KARS1)
Transfer RNA biogenesis [BR:
cmy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
102947237 (KARS1)
Prokaryotic type
Other AARSs
102947237 (KARS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
102947237
NCBI-ProteinID:
XP_037733605
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All DBs
Position
12:42470178..42489447
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AA seq
610 aa
AA seq
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MLSPPAARLLGGRFGWVWRARHPRAAFPALRRLQALHDQRSELKRRLKAERKVAEKEAKQ
KEQSEKHLSKSALTLGSENCNGADEESLDPNQYYKIRSQAIQQLKGTNEDPYPHKFHVDL
SLTDFIERYSHLQAGDHLRDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNY
KSDEEYIHINNKLRRGDIIGVQGNPGKTKKGELSVIPWEITLLSPCLHMLPHLHFGLKDK
ETRFRQRYLDLILNDYVRQKFIIRAKIITYLRSFLDELGFLEIETPMMNIIPGGAVAKPF
ITYHNELDMNLYMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMA
YADYHDLMEITEKLLSGMVKHITGSYKVTYHPDGPEGHAYEIDFTPPFRKISMVHELERI
LGMKLPATDHFETEETRKFFDAICVERGVECPTPRTTARLLDKLVGEFLEVTCIHPTFIC
DHPQIMSPLAKWHRSQQGLTERFELFVMKKEICNAYTELNDPFQQRQFFEDQAKAKAAGD
DEAMFIDDNFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDNKKEVE
SSPSAEGTSV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccccccagctgctcggctccttgggggccgctttggctgggtctggcgggct
cggcacccccgcgccgccttccccgcgctccgaaggctccaggcacttcatgaccaaaga
agtgagctgaagagacgtttgaaggctgagagaaaagtagctgagaaagaggcaaagcaa
aaagagcaaagtgagaagcatctgagcaaatctgccttgaccctgggatctgagaactgc
aatggagctgatgaggaaagcctggaccccaatcaatattacaagatccgcagtcaggca
atccagcagctgaaaggcaccaatgaagatccttaccctcacaagttccacgtagacctt
tccctcacagacttcatagagaggtacagccatctgcaggcaggagatcacctgagagac
attacagtgagagtggcaggtcgaatccatgcaaaacgtgcctctggagggaaactgatc
ttctatgatcttcgtggagagggagtcaaattgcaagtcatggcaaactccaggaactac
aaatcagacgaagaatatatccacattaacaacaagctgcgtcggggggacattattggg
gttcaggggaatcctggaaagacaaagaaaggagagctgagcgttattccctgggaaatc
actctgctctctccatgcctgcacatgttgccccaccttcacttcgggctcaaagacaag
gaaactagatttcgccagagatacttggatttaattcttaatgactatgtgagacagaag
tttataatccgtgcaaagatcatcacatacctccggagcttcctggatgagttgggcttt
cttgagattgaaactcccatgatgaatattattccaggtggagctgtggctaaacctttc
attacctatcacaatgaactggacatgaacttgtacatgagaattgctccagaactctat
cacaagatgttggtggttggaggcatggacagggtgtacgaaattgggcgccagttccgg
aatgaaggaattgatttgactcataatcctgaattcacaacctgtgagttttacatggct
tatgcagactatcatgacctgatggagatcacagaaaagttgctttcaggaatggtgaag
cacattactggaagttacaaggttacttatcacccagatggtcctgagggccatgcctat
gagatagatttcaccccacccttccggaaaatcagcatggtgcatgaactggagagaatc
ctgggaatgaaacttccagcaactgatcactttgagactgaagaaactcgcaagttcttt
gacgctatttgtgtggagagaggtgttgagtgtccaactcccaggaccacggccaggctt
cttgataagcttgttggtgagtttctggaagtcacctgtatccatcccacattcatatgt
gatcatccgcagatcatgagccctttggccaaatggcatcgctctcagcagggactgaca
gaacgctttgaactctttgtgatgaagaaggaaatatgcaatgcatacacagagctcaac
gaccccttccagcagcggcagttttttgaagatcaagcgaaggcaaaagcagcaggtgat
gatgaagccatgttcatcgatgacaacttttgcactgcattggaatatggacttccaccg
acagctggatggggcatgggcatcgatcggctcaccatgttccttacagactccaataat
attaaggaagtgctgctgtttcctgctatgaaacctgaagacaataagaaagaggtcgag
tccagtccctctgctgaaggcacctcagtgtga
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