Chelonia mydas (green sea turtle): 102947286
Help
Entry
102947286 CDS
T02989
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmy03036
]
102947286 (CHD9)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102947286 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
102947286
NCBI-ProteinID:
XP_037734173
LinkDB
All DBs
Position
12:complement(13402852..13584855)
Genome browser
AA seq
2892 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDTQ
TQQKMSEFEQLNQYDSLKLQVNQSFSSPADSVLSPHTQFNCSPIHPQNQSNGMFPDVADG
SPMWGHQTTTTVPNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEQQHQCASLQSQQS
RNNINTGQDALNQPKNFMEVNISAPRRVSVTHPPQIANPSTLQQPLSVQQFSQNASASIH
FCGNQEGNYDGQSPTMTPCSVNNTQRFPSPYSYSNNHISPTSLLQSSTALSTSQQTHPLS
DYTGSDAFTSQTGTKQETTEHLLNPNTPLNSNSFQMLHSAHPQGSFSSSKLSPVNINFPA
SAGSASQISHFSDPIESNGFSSLDENLLHQVESQAEPFTGLDPEDLLQEDLLPQFDDSAF
VQDTSSHILEHDLEHHITPQQITQSSDIARTESQSQMHPWHSSVSNRHLQDRNRIALQGQ
PPSSKKTDVSGTYTKLQNTQVRAMSEKKQKKKVESESKQEKANRIISEAIAKAKERGERN
IPRVMSPENFPSVSAEGREEKKGRKIKCKPKDKESKKTKTGSSSKIKDKTKIGKLIITLG
KKQKRKNESSDEMSDTKQTPQRSFKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSV
KIKKSSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISAGMTMEEEEFFVKYKN
YSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVS
FCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPP
NSWKKLEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEI
LLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMVSRQMIQQYEMYFRDSQGRI
IRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKV
LLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRL
KEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRK
CCNHPYLIKGAEEKILGEFRETYIPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVL
IFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG
LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASL
KLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQI
LQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNS
LVIDTPRIRKQTRPFSATKDELAELSEAESEGDDKPKLRRPCDRSSGYGRTECFRVEKNL
LVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTED
GQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKH
HCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASEVDVWVPEPEHSEVPAEWWDADADKS
LLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPA
MFKDDMEDDASSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQ
QIQPTFPVQATVMQPPYEEAALNPKIAAKIERQQRWTRREEADFYRVVSTFGVVFDPDGG
RFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPTIFIQPITEERAS
RTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRT
DYHILRDPELSFMSAQRNYSQNKVALSRTSTPLLHQYQMALSASPLAPQSRLLDTKGNAL
EDTKVKNENLKEDPQSSEEESMSTEETRTMMKSEPLSPKNGTPLQTTDHKPGVKTETDRR
MVAARTEPLTPNPASKKQRVNKRGSDSSSDSDSESDRSSCSSRSSSSSSSSSSSCSRSQS
GSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDDEEAQKRAEGTPHIKAYDEESV
ASLSTTQDETQDCFQLNNGTPNSNYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKW
PSARRSYDSNTVASFYTTKLLDSPGAAADYSEPSAPTPPTAGVKEEHDQSPQMPKVKKHV
REKEFTVKINDEGGLKLTFQKQGFSQKRLFESEEGTLGQQQYLARLRELQNASETSLVNF
PKSLPESGASSQLTVNANGVMVDSQPVVKKRRGRRKNVEGVDILFINRNKPPNHVSPGIN
TSQVAPVINPTLTYAQSQGLLDEESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYV
EDLGAFIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPL
KDLCRFLKENPEYGVAPEWGDVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAK
ATAAAAAAATAANVSVNPLLANGLLPGVDLSTLQALQQNLQNLQSLQVTAGLMGMPAGLT
TGGEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESVSEEKKGNDSKEPVVKKERTEN
QHADNGGEDSVSSSPSTSSAAANPLALNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFD
VQNAENNDTGSSKPTEEKEKNSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTS
SSSEDSDSSDED
NT seq
8679 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaacctttttagcgagacgttagaa
ggtttgtcggatgatgcctttgtacaacctggacccgtttcactagttgatgaattgaac
ttgggtgcagaatttgagcctttgcacatagactcattgaaccatgtgcaagatactcaa
actcaacaaaagatgagtgaatttgagcagttaaatcagtatgattcattgaaacttcaa
gtaaatcagtctttcagcagtccagctgacagtgttttatcaccacacactcaatttaat
tgctcaccaatccatccacaaaaccaatccaatggaatgtttcctgatgtggctgatggt
agtcctatgtggggtcatcaaactaccacaactgttccaaatcaaaatgggtcccctttt
caccaaggacattctcagtctatgcagcaaaataaaagttttgtagcacaccatgacttt
gccttatttcaggccaacgaacagcagcatcagtgtgcctcactacagtctcaacaaagc
agaaacaacattaacacagggcaagatgctctgaatcagccaaaaaactttatggaggtt
aacatatctgctccacgcagagtcagtgttactcatccacctcaaattgctaatccatca
actttacagcagcctctctctgttcaacagttttctcaaaatgccagtgcttcaatacat
ttttgtgggaatcaagaaggaaactatgatggacaatctccaactatgactccttgctct
gttaataatacacagcggtttccttctccatattcttactctaataaccacatttctcct
actagccttctacagtcttctactgctctttctactagccaacaaactcatcctttatct
gattatactggaagtgatgcctttacatctcaaacagggaccaagcaagaaaccaccgag
cacctcttgaatcctaacacacctttgaattcaaatagtttccagatgttgcattcagca
catcctcagggcagcttcagtagttcaaaactctctcctgtgaacattaattttccagcc
tctgcgggttctgcttctcagataagccatttcagtgatcctatagaaagcaatggtttt
tcatctttggatgagaacttacttcatcaagttgagtctcaagctgaaccatttacagga
cttgatccagaggacctccttcaggaagacctcctaccccaatttgatgattcagcattt
gttcaggacacttcaagccacatattagagcatgacctagaacaccatattaccccacag
caaataacacagtcatctgatattgctcggacagagtctcaaagtcagatgcatccctgg
cattcttcagtttctaatcggcatctacaagatagaaatcgtatagccttgcaagggcag
cctccttcctccaagaaaactgatgtttcagggacatatactaaattgcagaatacccag
gtgagggcaatgtcggaaaagaaacagaagaaaaaagtagaatcggaaagtaagcaggag
aaggctaatcgcataatatcggaggcaatcgcaaaagcaaaagagagaggggagagaaac
attccacgagtaatgagccctgaaaacttccccagtgtttcggctgaaggaagagaggaa
aagaaaggtagaaaaattaaatgcaaaccaaaggacaaggagagcaaaaaaactaaaact
ggttcctcatccaaaattaaagacaaaacaaaaattggcaagcttataatcacattgggt
aaaaagcagaagagaaagaatgagtcttcagatgaaatgtctgatactaagcagactcca
cagcggtcatttaaagatgaggactctcagaagagaagatcaaatcgtcaagttaaaaga
aaaaagtatgctgaagaaggagaaggaaaacagtcagaggaagaggctaaagtttctgtg
aaaatcaaaaagagttctgctcctttgcctgctgagcaacccttacaattatttgtggag
aatccaagtgaagaagatgcagcaattgtagataaaattttatcctccaggatagtgaag
aaagaaatatctgctggaatgacaatggaagaagaagaattttttgtaaaatacaagaac
tactcctatcttcactgtgaatgggccacagaacagcagcttctgaaggataaaagaatc
cagcagaaaattaaacggttcaagctgaggcaagcacaaagagcccacttttttgcagat
atggaagaagaaccttttaatcctgactatgttgaagtggaccgggtgttagaagtgtcc
ttttgtgaagataaggacactggtgagcctgttatttactacctagtaaaatggtgttca
ttgccatatgaggacagcacctgggagttaaaagaagatgtagaccaggcaaaaatagaa
gaatttgaacaactgcaagcttccaggcctgattcaaggagactggaccgacctcctcct
aactcctggaagaagctagaacagtccagagaatataaaaatggcaaccagctcagggaa
taccaactggaaggactcaactggctccttttcaactggtacaatagacgaaactgcatt
ttagcagatgaaatgggtcttggcaaaaccatccagtcaattacattcctctatgaaatc
ctcctgactggtatacgagggccttttctgatcatagctccactttccactataaccaat
tgggaaagagaatttcgcacgtggactgatcttaatgtcgtggtatatcatgggagcatg
gttagcaggcagatgatacagcagtacgagatgtacttcagggactcacaggggcgtatc
attcgaggtacttaccggttccaagctattatcaccacttttgaaatgattcttggtggc
tgtccagaactcaatgcaattgaatggcggtgtgttattattgatgaagcgcacaggctg
aagaataaaaattgcaaactcctggagggactcaaactcatgaatcttgagcacaaagtg
ctgttgacaggcacgccactgcagaacacagtagaagaactgtttagcctccttcatttt
cttgaacctttgcgttttcctgctgaatctacattcatgcaggaatttggggaccttaaa
acggaggagcaggtgcaaaagttacaagctatcctgaaaccaatgatgctgagacggttg
aaggaagatgtagagaaaaagttagctcccaaggaagaaactataattgaagtagaacta
actaatatccagaagaaatattatcgggcaattttggagaagaactttgcattcttgtcg
aaaggagctggccaagctaatgtacccaatctagttaacactatgatggaactcagaaag
tgctgcaaccacccttatcttatcaaaggtgctgaagagaaaatccttggggagtttagg
gaaacatatatcccaactgctcctgattttcatctacaagcaatgatccagtctgctggt
aaattggtcctcattgataaacttcttccaaaaatgaaagcaggaggccataaggtgctt
atcttctctcaaatggtgcgctgtcttgacatccttgaggactaccttatacataaaagg
tacttatatgaaagaattgatgggagagtgagaggaaatctgaggcaagctgctattgat
cggtttagcaaaccagactctgatcggtttgtgtttcttctgtgtaccagagctggtgga
ttaggcattaatttgactgcagctgatacatgtataatttttgattctgactggaatcct
cagaatgatctccaggcccaagcccgttgtcacaggattggtcagaacaaagcagtaaag
gtctacagattgataactcggaactcatatgagagagagatgtttgacagagcaagtctg
aaattgggtctggataaagctgtcttgcagagcatgagtggaagagaaaatagtgttggt
ggtatccaacagctttccaaaaaagaaatagaagacctgcttcgaaggggtgcctatggt
gctattatggatgaagaggatgagggctctaaattctgtgaagaagacatagaccaaatc
ttgcagcgccgtacgaaaactatcacaattgaatccgaaggaaggggttcaacgtttgcc
aaggctagttttgttgcatctggaaataggactgatatttcattagatgatcccaacttc
tggcagaaatgggccaaaaaagcagaaatagatatagatgccatcagtggtagaaacagc
ctggttattgataccccaagaattaggaagcaaacaagaccctttagtgccacaaaagat
gagctggctgagttatcagaagcagagagtgaaggggatgataaaccaaaactccgcagg
ccttgtgaccgctctagtggatatggaagaacagagtgctttcgggtggagaaaaactta
ttagtctatgggtggggtcgttggagagagattttgtcacacggtcgcttcaagaggcaa
ctaaatgaacaggacgtggagataatttgccgagcactcttagcgtattgccttgttcac
tacagaggagatgaaaagataaaaagttttatatgggatctcatcaccccaacagaggat
gggcaaacacgagagctgcagaatcacctaggtttgtcagcacctgtgccgaggggtaga
aaaggaaagaaagtgaagactcaggctagcacttttgatatacataaagcagaatggctt
cgaaaatataatccggaacatctactgcaagatgaaggatataaaaaacacataaagcat
cactgcaataaggtcttgcttcgagtaagaatgctgtattacttaaaacaagaagtcatt
ggtaatgaatgccaaaaagtgtttgatggagttgatgccagtgaagttgatgtttgggtc
cctgagccagagcattctgaggtccctgcagagtggtgggatgcagatgcagataaatcc
ctcctaattggagtttttaagcatgggtatgaaaagtacaacactattagagcagatcct
gcactctgtttcttggaaagagtgggcaaaccagatgagaaagcagttgctgctgaacag
agagcaaatgattacattgatggggatgtagaagatccagaatataaaccagccccagca
atgtttaaagatgatatggaggatgatgcttcatcaccaggagatctagtaatagctgac
ggagacggtcagatgatggaaggagacaaaatttattggcccactcagtctgctttaaca
acacgtctgcgccgcctaataacagcctaccaacgtactagtaagaacaggcaggcccag
caaatccaaccaacgtttccagttcaggccactgtgatgcagcctccatatgaagaagct
gctctaaatccaaaaattgctgccaagattgaaaggcaacaaaggtggacgagaagagaa
gaagctgatttttacagggttgtatccacatttggagtggtgttcgatcctgacgggggt
cgatttgactggacaaaatttagagccatggctaggctacataagaaaactgatgagagt
ttagagaagtacttgtatgcttttatgtctatgtgcaggagagtctgtcgccttccctca
aaagaagaacttgtagacccaaccatttttatccaaccaattaccgaggagcgtgcttct
cggaccttatatcgcattgaactcttgaggaaggtacgagaacaggctctccgacatcca
cagctgtttgaacgcttgaaactttgtcagccaaatccagacttgccagtctggtgggag
tgtgggactcatgacagggatttacttattggagctgctaaacatggggttagcagaaca
gactatcacattcttcgtgatcctgaactctcatttatgtctgcccagaggaactacagt
cagaataaagtggcactatcaagaacttctactccacttttacatcagtatcagatggca
ttgtctgcttctcctcttgcacctcagtcaagattgctagatactaaagggaatgctctt
gaggatacaaaagttaaaaatgaaaaccttaaagaggaccctcagtcgtctgaagaagaa
tctatgtctactgaggaaacacggacaatgatgaaatctgaacctttgagcccaaagaat
ggcacgccattacagactacagaccacaaacctggcgtgaaaactgaaactgacaggcgt
atggttgcagcaaggacagagcccctaactccaaaccctgcttccaaaaaacagagagtc
aacaaaagagggtcagactctagctctgattctgactctgagtcagacagatcatcctgt
tcttccaggtcatcttcatcatcctcttcctcttcctcttcttgttcacgctcccaatca
ggatccagctcttcttcatcctcatcttgttcttcagcatcttcctcctcttcatcatct
tcatcttcttcatcatcgtcgtcgtcgtcgtcatctgaagagagtgacagtgatgacgaa
gaggcacaaaagcgagcagaaggaacccctcacatcaaagcatatgacgaagagagcgta
gcctctctgagcaccacacaagatgagacccaggactgtttccagttgaacaacgggacg
ccaaattccaactatctcttgcaaggtggatacatgttggctgcatcctattggccaaag
gatcgagttatgattaaccgactagacagtatttgtcaaacagtgttgaaaggtaaatgg
ccttcggcaagaagaagctatgacagcaatacagtagcatctttctacacaaccaaactt
ctggacagcccgggtgcagctgcagactacagcgaacctagtgcaccaacacccccaact
gcaggtgttaaggaagaacatgatcagtcgccacagatgccaaaggtgaagaagcatgta
cgagaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaagttgacttttcag
aagcaggggttttctcaaaaaaggctgtttgaaagtgaagaaggcacgttaggacagcag
caatacctggctcggcttcgtgagctccagaatgcttcagagaccagccttgtcaatttt
ccaaaatccttaccagaatcaggtgcttccagtcagttaacagttaatgctaatggagtg
atggtcgacagccagcctgtagtcaaaaagaggagaggaaggaggaagaatgtagaagga
gttgacatcctctttataaatagaaataaaccacctaatcatgttagtccaggcattaac
acctcgcaagttgctccagtaataaacccaacacttacttatgctcagtcccaaggtcta
cttgatgaagaaagcccagttcctgtcattaacctgaaagatggaacaagacttgcaggt
gatgatgcaccaaaaaggaaggatttagaaaaatggcttaaggaacatcctggttatgtt
gaagatttaggagcttttattcctagaatgcagcttcatgatgggaggcccaaacaaaaa
aggcatcgttgtcgaaaccctaataaactggatgttaatagtctcactggtgaagaacgt
gttcagctgatcaatagaagaaatgctagaaaggtgggaggtgcttttgctccaccgctg
aaggacttgtgcagattcttgaaagaaaatcctgagtatggagtagctcctgaatgggga
gatgttgtgaaacagtctggatttcttcctgaaggtatgtttgaccgaattctcactggg
cctgttgtacgagaagaagtaagcaggagagggagacggcctaaaagtgagattgccaag
gcaacagctgcagcagcagcagctgcaacagcagcaaatgtttcggtcaaccctttgcta
gccaatggattacttccaggagtggatctatctactcttcaggccttacaacaaaacctg
cagaacttgcaatcgctgcaagtaacagcaggattaatgggaatgcctgctggactaact
actggaggagaagctaagaatatggctgccatgtttcccatgctactgtcaggaatggct
ggattaccaaacttgctgggtatgggaggactcctaacaaagtcaacagaatctgtttca
gaggagaaaaagggaaatgactcaaaagagccagttgtaaagaaagaaaggacagaaaac
caacatgcagataatggtggtgaagactctgtgtcaagttctccctctacgtcctctgct
gctgccaaccctttagctcttaacccattacttttgtccaatatactttatccagggatg
cttctcactccaggccttaatcttcatatcccagcattgtcccaatccaatatttttgat
gtacagaatgctgaaaacaatgacacaggctcatccaagcctacagaagaaaaggagaaa
aattctagggttagagatcaggaagacaaagggggaacagagccaagctctcataatgaa
aacagcacagatgagggttcagagaaagcagatgcttcatctggatctgacagtacatcg
tcttcatctgaggattcagattctagtgatgaagactga
DBGET
integrated database retrieval system
