Chelonia mydas (green sea turtle): 102947289
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Entry
102947289 CDS
T02989
Symbol
WDR36
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102947289 (WDR36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmy03009
]
102947289 (WDR36)
Ribosome biogenesis [BR:
cmy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102947289 (WDR36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_SCAP
WD40_RFWD3
eIF2A
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_IFT122_1st
Cytochrom_D1
Beta-prop_WDR35_TULP_N
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
102947289
NCBI-ProteinID:
XP_043402687
LinkDB
All DBs
Position
5:68825627..68886514
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AA seq
911 aa
AA seq
DB search
MSRAGSAVRAAPGGGSALFSGFRALGLYSNHLPHVLRYHQRHREFYLITAAGRSFHTYNV
KKLGIVAVSNALLQDITCLAADRMLVFASYGNLLHAFARNKEVVHIYDGHKGEIRLLQPF
GDHVISVDIDNVLIVWDVQSEEEYLQLTFDKAVFAVSAIMHPSTYLNKILLGSEQGSLQL
WNVKSNKLLYSFPGWGLGGVTTLEQAPAVDVVAIGLVSGHIIVHNIKFDETLMKFQQDWG
PITAISFRTDGHPVMAAGSPIGHIALWDLEEKKLISQMRNAHSTAIAGMSFVQGEPLLVT
NGADNAIKIWIFDGPGGXGRFVRCRMGHSAPPTKIRYHGQMRQQILSAGQDGTLQSFSTV
HERFNKSLGRGSINKKKSKRKGLLYDTMALPPITAFATEIARQNDWDGIIACHQGYITCT
TWNYQKTSMGAHKLKPKAFSKNKPLDVYATVVDITSCGNFAVIGLSTGHVDVYNMQSGIH
RGHYGKEKAHEGAIRGVAVDGLNQLTITAGSEGLIKFWKFKTMDLVYSANLSSSPSAMLL
HRDSGILGIASDDFGISVLDVETRRIVRKFSGHHSQINDMAFSPDGRWLITASMDCTIKT
WDLPSGCLIDCFLLDSAAISISMSPTGDFLASSHVDDLGIYLWSNRSLYSLVSLRPLSAD
YEPSVIMLPGTCPAQDVDITGDEETSNEMIDYNSPAQLEEQLVTLSSLSESRWKNLLNLD
VIKKKNKPREPPKVPKSAPFFIPTVPGLIPRYAAAKQENDGQQVKIKLNRVVNLGVLAQK
SDFYVQLEEALSSNECKSNYXYGINYLKEMGPSSIETELRGLAPDAGGSVEVMKSFLRLI
GTMLNTKCDFEXAQAYLALFLKLHLKILSSEPVLLEEIAKVSTQLEETWIHLQTLFNQSL
CVLNYMKSALL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtgcgggcagcgcggtgagggcggcccccggcgggggcagcgcgctcttctcg
ggcttccgcgctctcggcctttactccaaccacctgccccacgtgctgcgctaccaccag
cgccaccgcgagttctacctgatcaccgccgcggggaggagcttccacacctacaacgta
aagaaacttggtatagttgctgttagtaatgctttattacaagacattacttgtttggca
gcagacagaatgttggtctttgcttcatatggcaatcttctccatgcttttgcccggaac
aaagaggtggttcatatatatgacggtcacaaaggagaaattcgccttttgcagccgttt
ggtgatcatgtcatctctgtggatattgataacgttcttattgtttgggatgtacaatca
gaagaagaatacctacaactgacttttgataaggctgtttttgcagtttctgccattatg
catccaagtacctacttaaataaaatcctccttggcagtgaacaaggaagcctgcagtta
tggaatgtaaaatccaacaaacttttatactcatttccaggatggggtttagggggtgtg
acaaccctcgaacaggcaccagcagtagatgtagttgcaataggtctcgtgtctggtcat
atcattgtgcacaacattaagtttgatgaaacactgatgaaatttcagcaagactggggt
cccatcacagcaatatctttccgtacagatggtcatccagtcatggcagctggaagtcct
attggacacattgcactctgggatctggaagagaagaaactaattagtcaaatgcgaaat
gcccattccacagcaatagctggtatgtcatttgtccagggagagccacttcttgttact
aatggtgctgataatgctataaagatatggattttcgatggccctggaggtngtggtcgg
tttgtgaggtgtcgtatgggacatagtgctcctccaacaaaaatcagataccatgggcaa
atgagacaacaaattcttagtgcaggtcaggatggaaccttgcagtctttttccacagtg
cacgaaaggttcaataaaagtttaggacgtggttccataaacaaaaagaaatcaaaaagg
aaaggtcttctgtatgatacaatggcccttccacctattactgcatttgcaacagagata
gcacgtcagaatgactgggatgggatcattgcttgccatcaaggttatataacttgtaca
acctggaactaccagaaaacttccatgggagcccataaactgaaaccaaaagcattcagc
aaaaacaagcctcttgatgtatatgcaacagtagttgacattacttcatgtggaaacttt
gctgtaattgggctttcaacaggacatgtagatgtatacaacatgcagtctggcattcat
agaggacattatggaaaagaaaaagcacatgaaggtgccattagaggggtagcagtggat
ggattaaaccagttgacaatcacagctggaagtgaaggattaattaaattctggaagttc
aagaccatggacctagtttactctgctaatctctcttcttctccaagtgcaatgctgctt
cacagagacagtggcattctgggaattgcctcagatgactttggcattagtgttttggat
gtagaaacaagaaggatcgtcaggaagttctcaggacaccacagccagattaacgacatg
gctttcagtcccgatggccgttggctaataactgcatcaatggattgcaccattaagact
tgggacctcccatctggatgcctcatagactgttttttgttagactcagcagcgatcagc
atttctatgtctcctactggagactttctagcttcatcacatgtagatgatcttggaatt
tatctatggtctaaccgttccttgtattcacttgtttctttacggccactttcagcagat
tatgagccttctgtaataatgcttcctggaacttgccctgcacaagatgtggacatcaca
ggagatgaagaaacaagcaatgaaatgattgactataattcaccagcccaattggaagag
cagctagtgaccttgtcatcactgtctgaatcaagatggaaaaacctcctcaatcttgat
gttatcaagaaaaagaataaaccaagagagccaccaaaagttcccaagtcagctccattt
ttcatcccaacagttcctggtctcataccacgatatgctgctgctaagcaagaaaacgat
ggacagcaggtaaagataaaactgaatagagtagtaaacctcggagtattggcacaaaaa
tctgatttctacgttcaacttgaagaagccttgagcagtaatgagtgtaagtcaaactat
taatatgggataaattatctaaaggaaatgggaccatctagtattgagacagagctaaga
ggcttggctccagatgctggtggctctgtagaggtgatgaaaagctttttgagactgatt
gggacaatgttgaacacaaagtgtgactttgagntggcccaggcatatcttgcgttgttt
ttaaagttgcatcttaaaatcctttcttcagagccagtcttgctggaagaaatagccaaa
gtgtcaacccaactagaggaaacctggatccatttacagactctcttcaatcaaagtctg
tgtgtgttaaattatatgaaaagtgctttgttataa
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