Chelonia mydas (green sea turtle): 102947293
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Entry
102947293 CDS
T02989
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04137
Mitophagy - animal
cmy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102947293
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102947293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102947293
03009 Ribosome biogenesis [BR:
cmy03009
]
102947293
04131 Membrane trafficking [BR:
cmy04131
]
102947293
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmy04147
]
102947293
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102947293
Ribosome biogenesis [BR:
cmy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102947293
Membrane trafficking [BR:
cmy04131
]
SNARE
SNARE associated proteins
Others
102947293
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102947293
Exosome [BR:
cmy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102947293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
102947293
NCBI-ProteinID:
XP_037757888
LinkDB
All DBs
Position
5:2514089..2544331
Genome browser
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGPGSGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgattctaaagcggatgacttatctaccgcaattctaaagcagaag
aacaggcccaatcggttaattgtcgatgaagccatcaatgaggacaacagtgtcgtatca
ctgtcccaggcaaaaatggatgaattgcagctgttcagaggagacacagttctgctaaaa
ggaaagaagaggagagaagcagtctgcattgtcctgtcagatgatacctgctcagatgag
aagattcgcatgaatagggttgttcgtaacaacctgagagtgcgccttggtgatgtgatc
agcatccagccctgcccagatgtgaagtatggcaaacgcatacatgtgttaccgattgat
gacacagtggaagggatcacaggaaatctgtttgaggtctacctcaagccatacttcctg
gaagcatatagaccaatcagaaaaggtgacatcttccttgtgcgtggagggatgcgtgct
gtggagttcaaagtggtggagacagacccaagcccttattgtatagtggctccagataca
gtgatccactgtgaaggggagcccatcaaacgagaggatgaggaagagtccctgaatgaa
gtgggctatgatgacattggaggctgccggaagcagctggcccagatcaaggagatggtg
gagcttccgctcagacaccctgcacttttcaaggccataggtgtgaagcctccccgtgga
atcctgctgtacggcccgcctggtaccggtaagaccctgattgcacgtgcagtggctaac
gaaactggagctttcttctttctgatcaatggtcctgagatcatgagcaagttggctggt
gagtctgagagcaatctgaggaaagcttttgaggaagctgaaaaaaatgcgcctgccatc
atcttcatcgatgagctggatgccattgctccgaagagagagaagacccatggagaggtg
gaacgtcgcatagtgtcgcagctgctgactcttatggatggcctgaaacagagagcacat
gtgattgttatggcagctaccaacagacctaacagcattgaccctgcactcaggcgattc
ggtcgctttgacagagaggtagatatcggtatccctgatgccaccggccgcctggagatt
ctacagatccacacaaagaatatgaaactggctgacgatgttgatctggagcaggtggcc
aatgagacccatggccatgttggtgctgacttggctgccctttgctccgaagctgctctt
caggccatcaggaagaagatggatctcatagacctggaggatgaaaccattgatgctgaa
gtgatgaattcactggccgtgaccatggatgacttcaggtgggctctgagccagagcaac
ccctcagctctgcgggagaccgtggtggaggtgccgcaggttacctgggaagatattggt
ggtctagaagatgtcaagagagaactccaggagcttgtgcagtatcctgtggagcaccca
gacaaattcctcaaattcggcatgactccatccaaaggggtcctgttttatgggccacct
ggctgtggtaagacactgctggctaaagccattgccaacgaatgccaggccaacttcatt
tccatcaaggggccagagcttctcaccatgtggtttggggagtcagaagccaacgtgcgt
gagatctttgacaaggcccgccaagcagcaccctgcgtgctcttctttgatgagctggac
tccattgcaaaggctcgaggtgggaacatcggcgatggtgggggcgccgcggaccgtgtc
attaatcagattctgacagagatggatggcatgtccaccaagaagaatgtcttcatcatc
ggtgctaccaacagaccagacatcatcgacccggccatcctgcgccctggccgcctggat
cagctcatctatatccccttgcctgatgagaagtcacgaatcgccatcctcaaggccaac
ctgaggaagtcccccgttgccaaggatgtggacctggagttcctggcgaagatgaccaat
ggcttttcaggagctgacctgaccgagatctgccagcgtgcctgcaaactggccattcgc
gagtccattgagaacgagatcaggcgagagcgcgagaggcagaccaacccttctgccatg
gaagtggaggaggacgacccggttccggagatccgcagggatcactttgaggaggccatg
cgctttgctcgccgctctgtcagtgacaacgacatcaggaaatacgagatgtttgcacag
actctacagcaaagccgcggcttcggcagcttcagattcccgtctggtaaccagggtggc
gctggcccaagccaaggcccaggcagtggcagcggggggaacgtgtacagtgaagacaat
gacgacgatctctatggttaa
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