Chelonia mydas (green sea turtle): 102947437
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Entry
102947437 CDS
T02989
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04145
Phagosome
cmy04148
Efferocytosis
cmy04510
Focal adhesion
cmy04512
ECM-receptor interaction
cmy04810
Regulation of actin cytoskeleton
cmy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102947437 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102947437 (ITGB5)
04148 Efferocytosis
102947437 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102947437 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102947437 (ITGB5)
04810 Regulation of actin cytoskeleton
102947437 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102947437 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmy04515
]
102947437 (ITGB5)
Membrane trafficking [BR:
cmy04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
102947437 (ITGB5)
Cell adhesion molecules [BR:
cmy04515
]
Integrins
Integrin beta subunits
102947437 (ITGB5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
102947437
NCBI-ProteinID:
XP_007057118
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All DBs
Position
11:complement(12640715..12753421)
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AA seq
802 aa
AA seq
DB search
MPRGRGLSSPSAARLFVLSALLHHLRGLNICTSGSATSCEECLLIHPKCAWCSKEEFGST
KFITSRCDFVENLITNGCAGELETPKSSINIVENLPLSSKGSSLTHSDVTQIMPQKISLN
LRPGDKTSFRVQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRNLGTKLAEEMRKLTSNFRL
GFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPHCVPSFGFRHLLSLTDKVDSFNEEVRKQ
KVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHIALDGKLGGLVQPHD
GQCHLNEANEYSASNQLDYPSLALLGEKLDENNIHLIFAVTKAHYILYKNFTALIPGTTV
EILHQDSNNIIQLIVKAYNSIRSKVELTVWDSPEDVSLTFTATCQDGFLYPGLRKCADLQ
TGDTVSFEVSVEARSCPAENTSHTFTIKPAGFRDTLEVEVAYNCTCGCTKRMERNSSKCS
GNGTYTCGLCECNSGYLGSKCECEEGENGNMYQNLCREAEGKPVCSGRGECSCNQCVCYK
SEFGRIYGLFCECNDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNCNCSTETNRCVSN
DSQMCSGRGNCVCGKCQCTEPGAFGETCEKCPTCPNVCSTKRDCIECMLHNSGGLADNQT
CPKHCKDEIITRVDVLKTDDQHSVLCVYPVNNCVMKFTYSELPSGKSNLTVLKEPECGSA
PNALTILLAVVGSILLIGIVLLVVWKLLVTIHDRREFARFQSERSRARYEMASNPLYRKP
ISTHSLDFTFNKLSKSYNGTID
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgccccggggccgggggctctcttcccccagcgccgcccgcctcttcgtcctctccgcc
ctgctccaccacctcaggggtctcaatatttgcacaagtggaagtgctacctcctgtgaa
gagtgcctgctcattcatccaaaatgcgcttggtgctccaaagaggaattcggcagcaca
aaattcatcacatcgaggtgcgacttcgtagaaaacctgattacgaatggctgtgcgggg
gaacttgagactcccaaaagcagcattaacatcgtggagaatcttcctctaagtagcaag
ggctccagcttgacccattcggatgtgacacaaataatgcctcagaagatctcgttgaat
ctgcggcctggtgacaagacctccttccgagtgcaggttcgtcaggtagaagactatcct
gtggatttgtattacttgatggatctctcgctatccatgaaggatgacctggataacatt
cggaatctgggaaccaagctggctgaggagatgagaaagctcaccagcaatttccggctg
gggtttgggtcgtttgtggacaaaaatatttctcctttctcctacacagctccgcgatat
caaaacaatccctgcattggttacaagttatttccacactgtgtcccatcctttggattc
cgccatctcttgtccctcacggataaagtggacagtttcaatgaagaagttcggaaacag
aaggtttcccggaacagagatgctccagaaggtggctttgatgcaatcctgcaggctgct
gtgtgcaaggagaagattggctggcggaaagaggcctctcacttgctggtcttcacgaca
gacgatgtgccacacatagcactggacgggaagttaggtggactggtccagccacatgat
ggccagtgtcacctgaatgaggcgaacgaatacagtgcgtccaaccagctggattatcct
tccctagcacttcttggggagaaactggatgaaaacaacattcatctcatatttgctgtg
acaaaagctcattatatactttacaagaattttacagcactaattcccggaacgacagtg
gagattttacatcaagactccaacaacattatccagctgatagtcaaggcatacaatagt
attcggtctaaagtagaactaactgtttgggacagtcctgaggatgtcagcctgaccttc
acagctacgtgccaagacggtttcttgtatcctggactcaggaagtgtgcagatctccaa
acaggagacacagtttcctttgaggtgtctgtcgaagctcggagctgccctgccgaaaac
acctcgcacactttcaccataaagccagctgggttccgggacactctggaggtggaggtt
gcttacaactgcacttgtggatgtacgaagcggatggaacggaacagcagcaagtgcagt
gggaatgggacttacacatgtggattatgtgaatgtaactcaggctatttgggatccaag
tgtgaatgcgaagagggagagaacgggaacatgtatcagaacttgtgccgggaggctgaa
ggcaaacctgtctgcagtggcaggggggaatgcagctgcaaccagtgcgtctgctacaag
agtgagtttggaaggatctatggattgttctgtgaatgcaatgacttctcctgtgccaga
tacaagggtgtcctctgttcaggccatggggagtgtcactgtggggagtgcaagtgccat
gctggttacattggagacaactgcaactgctcgacagagactaaccgttgcgtttcgaat
gacagtcagatgtgcagtggcagaggcaactgtgtctgtgggaaatgccaatgcaccgag
cccggagcctttggagagacgtgtgagaaatgtcctacctgcccaaatgtctgcagcact
aaaagggactgcattgagtgcatgttacataactcaggaggactggctgataaccaaacc
tgcccaaaacactgcaaggatgagatcattacacgtgtggatgtcctcaaaacggatgac
cagcactcggtcctgtgtgtctaccccgtgaataactgtgtgatgaagttcacctactcg
gaacttcccagtggaaagtccaatctcacagtcctcaaagagccagagtgtggctctgca
cccaacgccctgaccatcttgctggccgtggtgggcagcattttactgataggaattgta
cttctggttgtctggaagctgcttgtcaccattcacgacagacgggagtttgccagattc
caaagcgaacgctcccgggcgagatatgaaatggcatccaatcctctttaccgaaagcct
atctctacgcatagcttagatttcacattcaacaagctaagcaagtcctataatggcaca
atcgattga
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integrated database retrieval system