KEGG   Chelonia mydas (green sea turtle): 102947437
Entry
102947437         CDS       T02989                                 
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy04145  Phagosome
cmy04148  Efferocytosis
cmy04510  Focal adhesion
cmy04512  ECM-receptor interaction
cmy04810  Regulation of actin cytoskeleton
cmy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102947437 (ITGB5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102947437 (ITGB5)
   04148 Efferocytosis
    102947437 (ITGB5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102947437 (ITGB5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102947437 (ITGB5)
   04810 Regulation of actin cytoskeleton
    102947437 (ITGB5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmy04131]
    102947437 (ITGB5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cmy04515]
    102947437 (ITGB5)
Membrane trafficking [BR:cmy04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    102947437 (ITGB5)
Cell adhesion molecules [BR:cmy04515]
 Integrins
  Integrin beta subunits
   102947437 (ITGB5)
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E EGF_TEN RNA_pol_A_CTD
Other DBs
NCBI-GeneID: 102947437
NCBI-ProteinID: XP_007057118
LinkDB
Position
11:complement(12640715..12753421)
AA seq 802 aa
MPRGRGLSSPSAARLFVLSALLHHLRGLNICTSGSATSCEECLLIHPKCAWCSKEEFGST
KFITSRCDFVENLITNGCAGELETPKSSINIVENLPLSSKGSSLTHSDVTQIMPQKISLN
LRPGDKTSFRVQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRNLGTKLAEEMRKLTSNFRL
GFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPHCVPSFGFRHLLSLTDKVDSFNEEVRKQ
KVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHIALDGKLGGLVQPHD
GQCHLNEANEYSASNQLDYPSLALLGEKLDENNIHLIFAVTKAHYILYKNFTALIPGTTV
EILHQDSNNIIQLIVKAYNSIRSKVELTVWDSPEDVSLTFTATCQDGFLYPGLRKCADLQ
TGDTVSFEVSVEARSCPAENTSHTFTIKPAGFRDTLEVEVAYNCTCGCTKRMERNSSKCS
GNGTYTCGLCECNSGYLGSKCECEEGENGNMYQNLCREAEGKPVCSGRGECSCNQCVCYK
SEFGRIYGLFCECNDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNCNCSTETNRCVSN
DSQMCSGRGNCVCGKCQCTEPGAFGETCEKCPTCPNVCSTKRDCIECMLHNSGGLADNQT
CPKHCKDEIITRVDVLKTDDQHSVLCVYPVNNCVMKFTYSELPSGKSNLTVLKEPECGSA
PNALTILLAVVGSILLIGIVLLVVWKLLVTIHDRREFARFQSERSRARYEMASNPLYRKP
ISTHSLDFTFNKLSKSYNGTID
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgccccggggccgggggctctcttcccccagcgccgcccgcctcttcgtcctctccgcc
ctgctccaccacctcaggggtctcaatatttgcacaagtggaagtgctacctcctgtgaa
gagtgcctgctcattcatccaaaatgcgcttggtgctccaaagaggaattcggcagcaca
aaattcatcacatcgaggtgcgacttcgtagaaaacctgattacgaatggctgtgcgggg
gaacttgagactcccaaaagcagcattaacatcgtggagaatcttcctctaagtagcaag
ggctccagcttgacccattcggatgtgacacaaataatgcctcagaagatctcgttgaat
ctgcggcctggtgacaagacctccttccgagtgcaggttcgtcaggtagaagactatcct
gtggatttgtattacttgatggatctctcgctatccatgaaggatgacctggataacatt
cggaatctgggaaccaagctggctgaggagatgagaaagctcaccagcaatttccggctg
gggtttgggtcgtttgtggacaaaaatatttctcctttctcctacacagctccgcgatat
caaaacaatccctgcattggttacaagttatttccacactgtgtcccatcctttggattc
cgccatctcttgtccctcacggataaagtggacagtttcaatgaagaagttcggaaacag
aaggtttcccggaacagagatgctccagaaggtggctttgatgcaatcctgcaggctgct
gtgtgcaaggagaagattggctggcggaaagaggcctctcacttgctggtcttcacgaca
gacgatgtgccacacatagcactggacgggaagttaggtggactggtccagccacatgat
ggccagtgtcacctgaatgaggcgaacgaatacagtgcgtccaaccagctggattatcct
tccctagcacttcttggggagaaactggatgaaaacaacattcatctcatatttgctgtg
acaaaagctcattatatactttacaagaattttacagcactaattcccggaacgacagtg
gagattttacatcaagactccaacaacattatccagctgatagtcaaggcatacaatagt
attcggtctaaagtagaactaactgtttgggacagtcctgaggatgtcagcctgaccttc
acagctacgtgccaagacggtttcttgtatcctggactcaggaagtgtgcagatctccaa
acaggagacacagtttcctttgaggtgtctgtcgaagctcggagctgccctgccgaaaac
acctcgcacactttcaccataaagccagctgggttccgggacactctggaggtggaggtt
gcttacaactgcacttgtggatgtacgaagcggatggaacggaacagcagcaagtgcagt
gggaatgggacttacacatgtggattatgtgaatgtaactcaggctatttgggatccaag
tgtgaatgcgaagagggagagaacgggaacatgtatcagaacttgtgccgggaggctgaa
ggcaaacctgtctgcagtggcaggggggaatgcagctgcaaccagtgcgtctgctacaag
agtgagtttggaaggatctatggattgttctgtgaatgcaatgacttctcctgtgccaga
tacaagggtgtcctctgttcaggccatggggagtgtcactgtggggagtgcaagtgccat
gctggttacattggagacaactgcaactgctcgacagagactaaccgttgcgtttcgaat
gacagtcagatgtgcagtggcagaggcaactgtgtctgtgggaaatgccaatgcaccgag
cccggagcctttggagagacgtgtgagaaatgtcctacctgcccaaatgtctgcagcact
aaaagggactgcattgagtgcatgttacataactcaggaggactggctgataaccaaacc
tgcccaaaacactgcaaggatgagatcattacacgtgtggatgtcctcaaaacggatgac
cagcactcggtcctgtgtgtctaccccgtgaataactgtgtgatgaagttcacctactcg
gaacttcccagtggaaagtccaatctcacagtcctcaaagagccagagtgtggctctgca
cccaacgccctgaccatcttgctggccgtggtgggcagcattttactgataggaattgta
cttctggttgtctggaagctgcttgtcaccattcacgacagacgggagtttgccagattc
caaagcgaacgctcccgggcgagatatgaaatggcatccaatcctctttaccgaaagcct
atctctacgcatagcttagatttcacattcaacaagctaagcaagtcctataatggcaca
atcgattga

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