Chelonia mydas (green sea turtle): 102947564
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Entry
102947564 CDS
T02989
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X2
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmy03041
]
102947564 (DDX1)
03016 Transfer RNA biogenesis [BR:
cmy03016
]
102947564 (DDX1)
Enzymes [BR:
cmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102947564 (DDX1)
Spliceosome [BR:
cmy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102947564 (DDX1)
Transfer RNA biogenesis [BR:
cmy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
102947564 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
102947564
NCBI-ProteinID:
XP_007052929
LinkDB
All DBs
Position
3:complement(24864811..24899483)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGVTKGKYYYEVSCHDQGLCRIGWATMQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTVGCYLDIDKGQIKFSKNGKDLGFAFEIPPHIKSQALFAACVLKNAELKF
NFGEEDFKFPPKDGFIALCKAPDGNVLKSQHTGNAQVAQTKNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSILENGVDIVVGTPGRLDDLVSTGKLS
LSQVRFLVLDEADGLLLQGYSDFINRIHGQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKNDKQWERLGKNHIRTDEVHAKDNTRPGVN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNMEQYFMQQGGGPDRKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLG
EIEEHLNCTISQVEPDIKVPVDDFDGKVTYGQRRAAGGGTYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRMF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttctccgagatgggtgttatgccagagatagctcaagctgtggaggagatg
gactggcttcttcccacagatattcaagctgagtctatcccattgattctaggaggcggt
gatgtgcttatggctgcagaaactgggagtggaaagactggtgctttcagcatcccagtt
atccagattgtttatgaaacccttaaggaccagcaggaaggcaaaaaggggaaaactact
atcaaaactggtggggcagtactcaacaaatggcagatgaacccatacgatagaggatca
gcttttgcaattggatcagatggtctgtgttgccaaagcagggaggtaaaggaatggcat
ggatgcagagcaactaaaggagtgactaaaggaaaatattattatgaagtatcctgtcat
gaccagggcttgtgcagaattgggtgggccactatgcaggcttcattggatttgggcact
gacaaatttggctttggctacggtggaactggaaagaagtcacataacaaacagtttgac
agttatggtgaggaattcactatgcatgatacagttgggtgctatctggatatagacaag
gggcaaataaagttctccaaaaatgggaaagaccttggctttgcatttgaaatcccacca
catataaagagccaagcactctttgcagcctgtgttctgaaaaatgctgaattgaaattc
aattttggtgaagaagactttaagtttccaccaaaggatggatttattgctctttgcaaa
gctcctgatggaaatgttctgaaatcgcagcacacaggaaatgcacaagtggctcaaaca
aagaaccttcctaatgctccaaaagcattaattgtggaaccatccagagagttagcagaa
caaactttgaataacgtaaaacaattcaagaaatacgttgataatcctaaattaagggaa
ctcctaattattggtggtgttgctgcaagagatcaactttccattctggaaaatggtgtg
gacatagttgtgggaacccctggaaggttggatgacttggtgtcaactggaaagcttagc
ttatctcaagttagattcctggttcttgatgaagctgatggtcttcttctccaaggttat
tcagacttcataaacagaatccacggtcaaattcctcagataacttcagatggaaaaaga
ctgcaggttattgtgtgttctgcaactctacattcttttgatgtgaagaaactgtctgag
aagatcatgcatttccccacttgggttgacttaaaaggagaggattctgtcccagaaact
gtgcaccatgttgttgttcctgtgaatcctaaaaatgacaaacaatgggaaaggcttggc
aagaatcatatcaggactgatgaggtacatgcaaaagataatacaaggcctggtgttaac
agtccagaaatgtggtctgaagctattaaaatactgaagggagaatacgctgttcgagca
attaaggaacacaagatggatcaagcaattattttctgcagaactaaaatagactgtgat
aacatggagcagtactttatgcaacaaggaggaggcccagataggaaaggacatcagttc
tcatgtgtctgtctgcatggtgacagaaaacctcatgaaagaaaacaaaatttggaaaga
tttaagaagggagatgtcagattcttgatctgcaccgatgtagctgctagaggaattgat
atccatggtgttccttatgttatcaatgtcacactccctgatgaaaagcaaaactacgtt
catcgaattgggagagtaggcagagctgaaagaatgggtctggcgatttccctcgtggca
acagaaaaagagaaggtgtggtatcacgtttgtagtagccgtggaaagggttgctataat
accaggctgaaggaagatggaggttgcactatatggtacaatgagatgcagttgctgggt
gagattgaagagcacctgaattgtactatttcccaagttgagccagatataaaagtacca
gtggatgacttcgatgggaaagttacatatggacaaagaagggctgcaggcggtggaacc
tataaaggccatgtggatattttggcacctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttacatcttggctaccttcctaaccagctgttcagaatgttt
tga
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