KEGG   Chelonia mydas (green sea turtle): 102947568
Entry
102947568         CDS       T02989                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03030  DNA replication
cmy03410  Base excision repair
cmy03420  Nucleotide excision repair
cmy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102947568 (RFC2)
   03410 Base excision repair
    102947568 (RFC2)
   03420 Nucleotide excision repair
    102947568 (RFC2)
   03430 Mismatch repair
    102947568 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmy03032]
    102947568 (RFC2)
   03036 Chromosome and associated proteins [BR:cmy03036]
    102947568 (RFC2)
   03400 DNA repair and recombination proteins [BR:cmy03400]
    102947568 (RFC2)
DNA replication proteins [BR:cmy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102947568 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    102947568 (RFC2)
Chromosome and associated proteins [BR:cmy03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102947568 (RFC2)
DNA repair and recombination proteins [BR:cmy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102947568 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    102947568 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 nSTAND_NTPase5 AAA_22 RCF1-5-like_lid AAA_14 AAA_16 Mg_chelatase Viral_helicase1 AAA_11 Rad17 AAA_assoc_2 RuvB_N DNAX_ATPase_lid AAA_19 nSTAND3 AAA_5 AAA_18 AAA_24 AAA_23 AAA_28 AAA_25 MipZ AAA_30 ABC_tran NTPase_1 SLFN-g3_helicase RNA_helicase MeaB
Other DBs
NCBI-GeneID: 102947568
NCBI-ProteinID: XP_037736618
LinkDB
Position
17:16454691..16467386
AA seq 398 aa
METRAGGRAAPAGRRLFSGGPWLRGPAVTVRGGGATTGGRERRAGMDAEMAEAERPGPRA
GEQRGAAEAPGASGSAHYELPWVEKYRPMKLSEIVGNEDTVSRLEVFAREGNVPNIIIAG
PPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLSKGRHK
IIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDA
QILARLMKIVERENVQYTDDGLEAIIFTAQGDMRQALNNLQSTCSGFGFINSENVFKVCD
EPHPLLVKEMIQHCVNANIDEAYKILAHLWRLGYSPEDIVGNIFRVCKTFQMPEYLKLEF
IKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAES
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggagacccgggcaggaggccgcgcagccccggccgggcgccgcctcttttcaggcggg
ccctggctccgcggcccggcggtgacagtgcgagggggcggcgctacgacgggcgggcgg
gagcggcgggccggcatggacgcggagatggcggaggctgagcggcctgggccgcgagcc
ggggagcagcggggagcggccgaggcccctggcgcctccggcagcgcccactatgagctg
ccctgggttgaaaaatacagacctatgaagctatctgaaatagttgggaatgaagacact
gtgagcagactggaggtttttgcaagggagggaaatgtaccaaatattataattgctggt
cctccaggaactggtaaaacaaccagtatcttatgtttggctcgtgcactgcttggtcct
gcattaaaggatgctgttctggagctgaatgcttcaaatgacaggggcatcgatgttgtg
agaaacaaaatcaaaatgtttgctcagcagaaggtcacactttccaaaggtcggcataag
ataatcatcctggatgaagcagacagcatgacagatggagcacagcaagcattgcgaaga
accatggaaatttattccaaaacaactcgctttgcacttgcatgcaatgcctcagataaa
atcatagagccaatccagtcccgctgtgcagtgctgcgctacaccaagctgacagatgct
cagatccttgccaggttaatgaagattgttgagagagagaatgtacaatacacagatgat
ggactggaagctattatcttcacagcacaaggagatatgagacaggcactaaacaacttg
cagtccacctgttctggatttggctttattaacagtgagaatgtgtttaaggtgtgtgat
gagccacaccctctgctagtgaaggaaatgatacagcactgtgtgaatgcaaatattgat
gaagcatacaagattcttgcccacttgtggcggcttgggtactcaccagaagatatagtt
ggcaatatcttcagagtgtgtaaaaccttccagatgccggagtatctgaaattggagttc
atcaaggaaattggatatactcacatgaagatagcagaaggggtgaattctctcttgcag
atggctggactgcttgccaggctctgtcagaagacggctgctcctgcagaaagttaa

DBGET integrated database retrieval system