Chelonia mydas (green sea turtle): 102947579
Help
Entry
102947579 CDS
T02989
Symbol
SRSF1
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03040
Spliceosome
cmy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102947579 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102947579 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmy03041
]
102947579 (SRSF1)
Spliceosome [BR:
cmy03041
]
Common components
Common spliceosomal components
SR proteins
102947579 (SRSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102947579
NCBI-ProteinID:
XP_027675992
LinkDB
All DBs
Position
17:8278011..8284839
Genome browser
AA seq
249 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
YRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSVVVAEAVVEATAEAAVIPQEEAEDLHATLPV
TADPVLVHK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagggggcgtgatccgcggcccagccggtaacaacgactgccgcatctacgtg
gggaacctgccgcccgacatccgcaccaaggacatcgaggacgtgttctacaagtacggg
gccatccgcgacatcgacctcaagaaccgccgcggcgggccgcccttcgccttcgtggag
ttcgaggaccccagggatgcggaggacgcggtgtacggaagggatgggtacgattatgat
ggatatcgtctgagggtggagtttccccgaagcggcagaggcaccggcagaggaggtggc
ggaggtggaggtggtggggcccccaggggcaggtatggccccccgtcccggcggtctgag
tatcgagtgatagtttccggactgcctccaagtggaagttggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgttttccgagatggaactggtgtcgtg
gagtttgtacggaaagaagatatgacctacgcagtgcgaaaactggataacactaaattt
agatctcatgagggagaaactgcctacatccgtgttaaagttgatggcccaagaagtcca
agctatggaagatctcggtcacgcagcgtagtcgtagcagaagccgtagtcgaagcaaca
gcagaagccgcagttattccccaagaagaagcagaggatctccacgctactctccccgtc
acagcagatcccgttctcgtacataaatga
DBGET
integrated database retrieval system
