KEGG   Chelonia mydas (green sea turtle): 102947631
Entry
102947631         CDS       T02989                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmy03036]
    102947631 (KDM4B)
Enzymes [BR:cmy01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     102947631 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     102947631 (KDM4B)
Chromosome and associated proteins [BR:cmy03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102947631 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141
Other DBs
NCBI-GeneID: 102947631
NCBI-ProteinID: XP_007072157
LinkDB
Position
25:8633107..8848652
AA seq 1122 aa
MGSENPSPQNPGCKIMTFRPTLDEFRDFGKYVAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDGAILDHMKPTALTSPELDAWNE
TKPELKAKLLRRMGDEEEDNKQNYRSHRKRSQPRRHKTEDQKSLGEVIAMETALEEVKMK
EELKRGPDLDEEERSKVTEGGEGDSKVKGRPPKVKGERKKKHPHHQHHHHHSHHLQPPQP
PLQQQQLPPPPPQPQQQPAGEEAPAARPLIPAAAPASATAEKSLPSAPLNIVLPSEVPSE
EDDFKPRPIIPMLYVVPRTKKVVFEKERISCQQAFEQFATQKGQVWREQVVPLELTVKEE
ESGEAENADVATEVSDLQATSAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQEASSDEET
FPFSGEEDVSDPEALKSLLSLQWKNKAHNFPAERKFNAAAALSEPYCAVCTLFYPYNQSL
QMDKESVQVSTGESSSLLQLSKCGQKTKPLIPEMCFTSGGENTEPLPSNSYIGEDGTSLL
ISCAKCCLQVHASCYGIRPDLVNEGWSCSRCSANAWAADCCLCNLRGGALQMTTDGRWIH
IICAIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTS
FHVTCAHAAGVPMEPDDWPYVVSITCFKHKAANHNIQFRREVSLGQTVITKNRNGLYYRC
KVIGMTTQTFYEVNFDDGSYSDNVYPESITSRDCIQMGPPPEGELVQLQWTDGIIYKAKF
IAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEGVFSGDEVKA
AKRPRVGNSRNPEDYGQNPDYLAFMETLLQTQYQPGPQSNMF
NT seq 3369 nt   +upstreamnt  +downstreamnt
atggggtctgaaaacccaagtccacagaatcctggctgtaagatcatgaccttccgtccc
accctagacgagtttcgggactttgggaaatatgttgcctacatcgaatcgcagggagct
catagggcagggcttgccaaggtgattcctcccaaggaatggaagccccgaaagacttat
gatgacatcgatgatatggtcatcccagcgcctatccagcaggtggtgactgggcagtca
gggttattcacccagtataatatacagaagaaacccatgacggtgggagaataccggcgt
ctggccaacagtgagaagtactgtactcctcgtcaccaagattttgaagacctggaacgc
aaatactggaagaatctgacgttcgtctcaccaatttatggggcagatatcagtggctcg
ctatatgatgcagatgtagaagaatggaatattgggaatctgaacaccttgttggacatg
gtggagcatgagtgtgggattatcatagaaggtgtgaacaccccctacctttattttggc
atgtggaaaacaacatttgcatggcatactgaggacatggatctctacagcatcaactac
ctgcattttggggagccgaaatcctggtatgccataccaccagagcatggcaagcgattg
gaacgcctggcaaaaggatttttcccaggaagctctcagggatgcgatgccttccttcgc
cacaagatgaccctcatttcaccctccatcttgaagaaatatggcatcccatttgaccgg
atcacccaagaggctggagagtttatgatcacatttccttacggctaccacgcgggattc
aaccatggcttcaactgcgctgagtccaccaactttgccacactgcggtggattgactat
ggcaaaatggctacccaatgcacgtgccgcaaagacatggtgaagatttccatggatgtt
tttgtgagggttctacaaccggaacgttatgacttgtggaaacaagggaaagatggtgct
attctggaccacatgaaacccacagctctgaccagcccagagctggatgcctggaatgag
acaaagcctgagctgaaagctaagctgctccgcaggatgggagatgaagaagaggacaac
aaacaaaattaccggtctcacagaaaaagaagtcaacccagaaggcataaaacggaggat
cagaagtctcttggggaagtcatagctatggagactgccctggaagaagtcaaaatgaag
gaggagctgaaaagagggccagacctagatgaagaggagagaagtaaagtgactgagggg
ggagaaggagacagcaaggtaaagggccgtcccccaaaagtaaaaggtgagagaaagaag
aagcaccctcaccatcagcaccaccaccatcacagtcatcacctgcagccacctcagcct
cctttgcagcagcagcagctgccaccgccgcctccacagccacagcagcaaccagcaggg
gaagaggcaccagcagcccggccactgattcctgcagcagcaccagcatcagccacggca
gagaagagcttaccctctgctcccctcaatatcgtcctgccctcagaggtgccaagcgag
gaggatgactttaagccccgccccatcattcccatgctttatgtggttccacggaccaaa
aaggtggtctttgaaaaggagcgcatatcctgccagcaggcctttgagcagtttgccaca
caaaagggccaggtttggcgggagcaggtggtccctttggagctcactgtgaaggaggag
gagagcggagaagcagaaaatgcggatgttgccactgaggtcagtgacttacaggccact
tctgctttttcaaaaatgaagatggagataaagaaaagtcgccgtcacccactgggcaaa
ccaccaacccgctccccattgtctgtggttaaacaggaggcctcaagtgatgaggaaacg
tttccattttccggggaggaggatgtgagtgacccagaggctttgaagtctttactttcc
ctgcagtggaagaataaagcacataacttcccagctgagcgaaaattcaatgcagctgct
gccctgagtgagccctactgtgctgtctgtaccctcttctacccttataaccagtcctta
cagatggataaagagtctgtccaggtctccacaggggagagctcctccttgctccagctt
tcaaagtgtggacagaagacaaagcctctgatccctgagatgtgctttacctcaggtggt
gaaaacacagagccccttccttcaaactcgtacattggagaagatggaaccagcctcctg
atatcctgtgccaagtgctgcctgcaggttcatgcaagttgctatggaatacgtcctgat
ctggtgaatgaaggctggtcttgttcacggtgctcagccaatgcatgggcagcggactgc
tgcctgtgtaatctcaggggaggagctcttcaaatgaccactgatggaaggtggatccat
ataatctgtgctattgctgtcccagaggcccgtttcctcaacgtaatagagcgccatcct
gtggacatcagtgctattccagagcagcggtggaaactgaaatgtgtgtactgccggaag
cggatgaagaaggtgtctggtgcctgcattcaatgctcctacgagcactgctccacttcc
ttccatgtgacctgtgcacatgccgctggggtacccatggagccggatgattggccatat
gttgtgtccatcacttgcttcaaacataaagcagccaaccacaatatccagtttcggagg
gaggtatcgctggggcagactgtgattacgaagaaccgcaatggactctactacaggtgt
aaagtaattggcatgacaacgcaaaccttctatgaagtgaactttgacgatggctcttac
agcgacaacgtttacccggaaagcattactagcagagactgcattcagatgggaccccct
ccagaaggcgagttggttcagctgcagtggactgatggaatcatctataaggccaagttc
attgcagcccagatcagtcagatttatcaggtggagtttgaagatggctcccagctgatg
gtaaaacgtggcgatatttacacgttggaggaggagcttcctaagagagtgaaatctcgc
ctgtccctcagcactggggcccctcaggaaggagtgttttccggagacgaagtgaaagcc
gccaagcgcccccgagtggggaattccaggaatcccgaggactatggacagaacccagat
tacttggccttcatggagaccctgctgcagacgcagtaccagccaggaccacagagcaac
atgttttaa

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