Chelonia mydas (green sea turtle): 114020438
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Entry
114020438 CDS
T02989
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114020438 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
114020438 (SOX17)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114020438 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
114020438
NCBI-ProteinID:
XP_037747543
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Position
2:complement(67532176..67534647)
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AA seq
399 aa
AA seq
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MSSPDAGYASSDDQTQARCSLPIMMPALGPCQWAESLSPLADAKVKSEAAPAGAASSRAK
SESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKAWKALSLAEKRPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRLKRVESGFLPHGLAEAPGAGLASEGSRMCVESLALP
YPEQGYPAVQSALPPALGHYRDCQPLAAAFDGYNLPTPDPSPLDAAESEPAFFTPPLQDE
CQLAPYAYPAAEYPAHGAESQAGGALRRHLPRAEPLGQLSSLQSLLGCQGPLHAYYGQLC
QPAGPARAPQLPPQPCQPSPPPEAQQCREPLEHLSQDDLLGDVDRTEFEQYLHFACKPEL
GLHFQGHEAGLPAPDAHGPISSVVSDASTAVYYCTYPDV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggatacgccagcagcgacgaccagacgcaggcaaggtgctcg
ctccccatcatgatgccggccctgggtccctgccagtgggcagagtccctgagccccctc
gcagacgccaaggtgaagagtgaggcggccccggcgggggctgcgagcagccgggccaaa
agcgagtcccgcatccgccggcccatgaacgccttcatggtgtgggccaaggacgagcgc
aagcggctggcgcagcagaacccggacctgcacaacgcggagctcagcaagatgctgggg
aaggcctggaaggcgctgtcgctggcggagaagcggccgttcgtggaggaggcggagcgg
ctgcgggtgcagcacatgcaggaccatcccaactacaagtaccggccgcgccggcggaag
caggtgaagcgcctgaagcgcgtggaaagcggcttcctgccgcacgggctggccgaggcg
ccgggcgccgggctggccagcgagggcagcaggatgtgcgtggagagcctggccctgccc
tacccggagcagggctaccccgccgtgcagagcgcgctgcccccggcgctgggccactac
cgggactgccagcccctggctgccgccttcgacggctacaacctgccgaccccggacccc
tccccgctggacgcggcggagagcgagccggccttcttcacgccgcccctgcaggacgag
tgtcagctggcgccctacgcctaccccgcggccgagtaccccgcgcacggcgccgagagc
caggccggcggcgcgctccgcaggcacctgccccgcgccgagccgctgggccagctcagc
tccctgcagagcctgctgggctgccagggccccctgcacgcctactacgggcagctgtgc
cagcccgccggcccggcccgcgctccccagctcccgccgcagccctgccagccctcgccg
ccgcccgaggcgcagcagtgcagggagcccctggagcacctgtcgcaggacgacctgctg
ggcgacgtggatcgcaccgaattcgagcagtacctgcacttcgcctgcaagcccgagctc
gggctccacttccagggccacgaagccggcctgcccgcgccggacgcccacgggcccatc
tcctcggtggtttcggatgcaagtactgctgtgtattactgcacttacccagacgtctaa
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