KEGG   Chelonia mydas (green sea turtle): 114020438
Entry
114020438         CDS       T02989                                 
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
  KO
K04495  transcription factor SOX17 (SOX group F)
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    114020438 (SOX17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmy03000]
    114020438 (SOX17)
Transcription factors [BR:cmy03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    114020438 (SOX17)
SSDB
Motif
Pfam: HMG_box Sox17_18_mid HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 114020438
NCBI-ProteinID: XP_037747543
LinkDB
Position
2:complement(67532176..67534647)
AA seq 399 aa
MSSPDAGYASSDDQTQARCSLPIMMPALGPCQWAESLSPLADAKVKSEAAPAGAASSRAK
SESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKAWKALSLAEKRPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRLKRVESGFLPHGLAEAPGAGLASEGSRMCVESLALP
YPEQGYPAVQSALPPALGHYRDCQPLAAAFDGYNLPTPDPSPLDAAESEPAFFTPPLQDE
CQLAPYAYPAAEYPAHGAESQAGGALRRHLPRAEPLGQLSSLQSLLGCQGPLHAYYGQLC
QPAGPARAPQLPPQPCQPSPPPEAQQCREPLEHLSQDDLLGDVDRTEFEQYLHFACKPEL
GLHFQGHEAGLPAPDAHGPISSVVSDASTAVYYCTYPDV
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgagcagccccgatgcgggatacgccagcagcgacgaccagacgcaggcaaggtgctcg
ctccccatcatgatgccggccctgggtccctgccagtgggcagagtccctgagccccctc
gcagacgccaaggtgaagagtgaggcggccccggcgggggctgcgagcagccgggccaaa
agcgagtcccgcatccgccggcccatgaacgccttcatggtgtgggccaaggacgagcgc
aagcggctggcgcagcagaacccggacctgcacaacgcggagctcagcaagatgctgggg
aaggcctggaaggcgctgtcgctggcggagaagcggccgttcgtggaggaggcggagcgg
ctgcgggtgcagcacatgcaggaccatcccaactacaagtaccggccgcgccggcggaag
caggtgaagcgcctgaagcgcgtggaaagcggcttcctgccgcacgggctggccgaggcg
ccgggcgccgggctggccagcgagggcagcaggatgtgcgtggagagcctggccctgccc
tacccggagcagggctaccccgccgtgcagagcgcgctgcccccggcgctgggccactac
cgggactgccagcccctggctgccgccttcgacggctacaacctgccgaccccggacccc
tccccgctggacgcggcggagagcgagccggccttcttcacgccgcccctgcaggacgag
tgtcagctggcgccctacgcctaccccgcggccgagtaccccgcgcacggcgccgagagc
caggccggcggcgcgctccgcaggcacctgccccgcgccgagccgctgggccagctcagc
tccctgcagagcctgctgggctgccagggccccctgcacgcctactacgggcagctgtgc
cagcccgccggcccggcccgcgctccccagctcccgccgcagccctgccagccctcgccg
ccgcccgaggcgcagcagtgcagggagcccctggagcacctgtcgcaggacgacctgctg
ggcgacgtggatcgcaccgaattcgagcagtacctgcacttcgcctgcaagcccgagctc
gggctccacttccagggccacgaagccggcctgcccgcgccggacgcccacgggcccatc
tcctcggtggtttcggatgcaagtactgctgtgtattactgcacttacccagacgtctaa

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