Chelonia mydas (green sea turtle): 114021796
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Entry
114021796 CDS
T02989
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
114021796 (CIC)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114021796 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
114021796
NCBI-ProteinID:
XP_037738750
LinkDB
All DBs
Position
24:complement(18345736..18374414)
Genome browser
AA seq
2475 aa
AA seq
DB search
MGAQCDDFILWSPRARIGWGQPRPRPPRGACVCAGGGGVPGPGADWPRCGPRRLRCCREE
ARGARTRRYGTGPGETAGSCEFTLPGGWKMKPARKAASSSSSSSSSSSSSRSPPSTRAKT
QKRRTAEGGPKPAEEEEGGGGGGEESPAQPPPLSGPHLMPVKMDPGSRELPGQQSDPYET
PEGEPGCDDPPGEPPLSRKTATFKSRAPRKNPAAGEEWSGSEGSGVPGEEGAGRCPSSST
DTASEHSADEDAKGAGGELWGPAPGPSDYDLRLLRSQRVLARRQGIFQPAVVKHVRRGQD
LGVQFAGDRAVTYYEGALGSGALDVVLDTTPSAGAVAVGARVCVCVAPEETTYYEGTVME
VSLKPASYKVRFAGPSPAPRKDTVWVPRSGLRLLRPPWNPAAAAPPKPEEEEPPGPEPKQ
PEDAEVSKISAGVRGAGEEKPSAAPPQLLSPPKSPAFARLPEQASPLLSPEAGGSRSSSV
VSVEKCSTPGSGRSRTPLTAAQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSREGCMKESQ
RRGYCSRHLSMRTKELESLSEGRASGLREGSAEFDWDETSRDSEASSARGDSRPRLVAPA
DLSRFEFDECEAAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPI
NASPVIQRAAARSRHVSASTPKGAGGGVLSPEMLHHAPHRERHSSGIVPTFQTNLTFTVP
MSPSKRKAEAPHGGPGGGADFQKSDSLDSGVESVSHTPTPSTPAGFRAVSPPGPGPFSSR
SQQASPLLLLSPPAGLTSDPSPMVRRVPAVQRDSPVIVRNPDVPLPSKFTEKPREGRAGS
PRLGKVGTKEQLQVPVPINMGRALPCSQASAVPAPEQAPPVFSVSSPFQPVAFHPSPAAL
LPVIVPNDYPGPPAPKKEIIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDSSVQPS
EGQQPVNHPAVSNQNKEPPESAAVAHDLPGVASGAELGKREASRPDSPASAPQATAATGG
AEGPSQLVDEAPGPPRLDSETESDHDDAFLSIVSPEIQLPLQPGKRRTQSLSALPKERDS
SSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGP
KEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSDTKPSAPGPGGGPKEARERSMSET
GTAAVPGASSEIPVLAGPEGKAGGTGHVPGERLIHVVGTGAQRPRAFSHSGVHGLDTGEL
DSQALQELTQMCSSPSPYPGGKGQYGGPGPSGTPFAAPGEGPRPPLLPPAPRAARSQRVA
SEDMTSDEERMVICEEEGDDDVIADDGFNPPDIDLKCKERVTDSESDTSSDEEPDGKDFG
RKLFSPVIRSPPLPPSSGAFAPCRPPAPPELDLPHGPDQPPLAKPYSPFPLAPSPFKAQD
SRGAPPPAPAKRPEPAPPYRRKRADSAGGAETGAAGPSVISPPGGTLQALVLPDPGRLSA
GTVLVPAPSLSGYGGAPVRPASTVVTNVVKPVSSTPVPIASKPFPRGVGEGGPLLSPPAL
EPAPPALAVLGGAKPEAVPVGRIGLLYADKKPPPPASQAPSPHLVAGPLLGPVPKAPGNV
VTNLLVGQAGGAGAGPAPVTVLPPQPSVQFITQNPSGSGPNGPVPLGILQPQGLLSGAPG
KAGSITQVQYILPTLPQQLQVAGGKGAGAGAASIHFTLPPTSSKVLATTPHGLPILQPGP
GSASTAVTVVSTAPKAQSVSPVQAPGPGGSAHLVQGKVLVPVAAPQVTVRPGGGAGPMAQ
VAPPFPVPLQNGAQPASKVIQLTSLTPAPNSGALAPPLSPATALVGPPGQAQKVLLPSSS
TRITYVQSTGGHQLTLGTSASPSQPGAAPAATYVQAPVGPAPMALGFTAIGPSGPAIVQP
LLSGQSPLLAPGQMGVSPLPSPQLPPSCSGPVITAIYPGPPTAGPAPSPAHGLVYSVASP
APAPILPKGSSAGSQGTLGPGPMGPLAFPPAPARPPRPPPKPPQKVKAAIASIPVGSYES
APSPGPARPPGGQQTEPGGPPRVSRELESPREPPELPDPSPPPQPPRPGPAPEPDSWDGR
PPSPAPPQHPVPEAESGEGWSQREAVPGASEERTPREQASTPGAAPGGKGPETTPRVPVS
PDWRVPGPESRPEVPAPPAGSSSSSALSPAPAGSGEGSRGAGPTPGAPEGPERKEGGGGK
KVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFKPEEVLPSPTLQSLATSPRAILGS
YRKKRKNSTDLDSSAEDPISPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDKTGAEAEDV
LGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYSDIFPTKVCLQL
KIREVRQKIMQAATPTEQAPSTPEPGGPGGGGAAEGQPPEPAPPQDSDPGAEAGGSTSWD
NSQTSPPGGAAGSGR
NT seq
7428 nt
NT seq
+upstream
nt +downstream
nt
atgggagcacagtgcgatgacttcatcctttggtcgccccgggcgcggattggctggggc
cagccccgcccccggcccccacgtggggcgtgtgtgtgtgctgggggcgggggggttccc
ggtccgggcgctgattggccgcggtgcgggccgcggcggctccgctgttgccgagaggaa
gcgcgaggggcccggacgaggcgctacggaaccgggccgggagagaccgccgggtcctgt
gagttcaccctgcctggaggctggaagatgaaacccgcgaggaaggctgccagctcctct
tcttcctcctcgtccagcagcagcagcagccgttctcccccgtccactcgggccaagacc
cagaagcgcaggacggctgagggggggcccaagccggcagaggaagaggaggggggcggg
ggaggtggggaggaaagccctgcccagcccccgcccttgtcaggcccccatctcatgcca
gtgaagatggaccccggctcgcgggagctgcctggccagcagagtgatccctacgagaca
cccgagggggagccggggtgcgacgaccccccaggggagcctcctctgagccgcaagacg
gccaccttcaaatcccgagccccccgcaagaacccggcggccggggaggagtggagcggg
tccgagggctccggggtgccaggcgaggagggcgctgggcgctgcccctcctccagcacc
gacacagccagcgagcactcggctgacgaggacgccaagggagctgggggggagctgtgg
ggcccagctcccggccccagcgactatgacctgcggctgctgcgctcgcagcgggtcctg
gcccggcgccagggcatcttccagccggctgtggtcaagcacgtccgtcgcggccaggac
ctgggagttcagttcgccggcgaccgggccgtcacctactacgagggggcgctgggctcg
ggggccctggacgtggtcctggacaccacgccctctgcgggcgccgtggcagtgggggcc
cgtgtctgcgtctgcgtggcccccgaggagacgacctactacgagggcactgtgatggag
gtgagcctgaagccggcctcctacaaggtgcgtttcgccggccccagcccggccccccgc
aaggacacggtttgggtgccacgctccggcctgcggctgctgcgcccaccctggaaccca
gctgccgccgcgccccccaagccagaggaggaggagccccctggccctgagcccaagcag
ccggaggacgctgaggtttccaagatcagcgctggcgtgcggggggccggggaggagaag
ccctcggctgcccccccgcagctgctgtcgccccccaaatccccggccttcgcccgcctg
ccggagcaggcctccccgctgctgagccccgaggcgggcggcagccgcagcagcagcgtg
gtgtcggtggagaagtgcagcacgccgggctcggggcgctcccgcacgcccctgacggcc
gcccagcagaagtacaagaagggggacgtggtctgcacccccaacggcatccgcaagaag
ttcaatggcaagcagtggcgccggctctgctcccgcgagggctgcatgaaggagtcgcag
cggcgcgggtactgctcccgccacctctccatgcgcaccaaggagctggagagcctgtcg
gagggccgggccagcgggctgcgggagggcagcgccgagttcgactgggatgagacgtcc
cgcgacagcgaggccagcagcgcccgcggcgactcccgcccccgcctggtggcgccggcc
gacctgtcccgcttcgagttcgacgagtgcgaggcggccgtcatgctggtatcgctgggc
agctcgcgctcgggcaccccgtccttctcgcccgtctccacccaatcgcccttctcgccc
gccccctcgccgtccccctcgcccctcttcggcttccggcccgccaacttcagccccatc
aacgcctcgcccgtcatccagcgggcagccgcccgcagccgccacgtcagcgccagcacg
cccaagggggcggggggcggcgtgctgagccccgagatgctgcaccacgccccgcaccgg
gagcggcactcctcgggcatcgtgcccaccttccagaccaacctgaccttcaccgtgccc
atgagccccagcaagcgcaaggcggaggcgccccacggcgggccgggtgggggcgccgac
ttccagaagagcgacagtctggactcgggggtggagtcagtctcccacacccccaccccc
tccacgcccgccggcttccgggccgtctcacccccgggccccgggcccttctcctcccgc
tcccagcaggcctcgccgctgttgctgctctccccacccgccgggctgacctccgacccc
agccccatggtgcgccgggtgccggccgtgcagcgggactcacctgtcatcgtccgcaac
cccgacgtgcccctgccttccaagttcacggagaagccgcgggaggggcgggcaggcagc
ccccggctgggcaaggtgggcaccaaagaacagctgcaggtgccggtgcccatcaatatg
gggcgggcgctcccctgtagccaggccagcgctgtcccggcccctgagcaggcacccccc
gtcttcagcgtctcctcgcccttccagccggtcgccttccacccctccccggctgccctg
ctgcccgtcattgtgcccaacgactaccctgggccgccggcccccaagaaagagatcatc
atgggccggcctggcacagtctggaccaacgtggagccgcgctctgtggccgtgttcccg
tggcactcccttgtgcccttcctggcccccagccagccggactcttccgtccagcccagc
gagggccagcaacctgtcaatcaccccgcagtgtccaatcagaacaaagagcctccagaa
tcagcggctgttgcccatgacctcccgggggtagcgtcaggggctgagctgggaaaacgg
gaggcttcccgccccgacagcccagcctcagccccccaggccacggcagcgactggaggg
gcagagggcccctcccagctcgtggacgaggccccagggcccccaagactggacagcgag
acagagagtgaccacgatgacgcgttcctgtcgatcgtgtcccccgagatccagctccct
ctgcagcccgggaagcgccggacgcagtcgctgagcgccctgcccaaggagcgagactcc
tcctccgagaaggatgggcgcagccccaacaagcgggagaaggaccatatccggcggccc
atgaacgccttcatgatcttcagcaagcggcaccgggccctggtgcaccagcggcacccg
aaccaggacaaccgcaccgtcagcaagatcctgggcgagtggtggtacgcgctggggccc
aaggagaagcagaagtaccatgacctggccttccaggtgaaggaggcgcacttcaaggca
caccccgactggaagtggtgtaacaaggaccggaagaagtcgagctcggacaccaagccc
tcggcaccggggcctggggggggccccaaggaggcgcgggagcgcagcatgtcggagacg
ggcacggctgccgtgccgggagcctcctcggagatcccggtgctggcagggccagagggc
aaggcagggggcacggggcacgtgcccggggagcggctgatccacgtggtggggactggg
gcgcagcggccccgggccttctctcacagcggggtgcacgggctggacactggggagctg
gacagccaggcgctgcaggagctcacacagatgtgctccagcccgtcaccctaccccggc
gggaaggggcagtatggggggccgggcccctctgggaccccattcgcagctccaggtgag
gggccccggccccccctactgccgccagccccccgtgccgcccgctcccagcgcgtggcc
agcgaggacatgacgagcgacgaggagcgtatggtcatctgtgaggaggagggggacgat
gatgtaattgcggacgatgggttcaacccgcccgacattgacctgaagtgcaaggagagg
gtgacggacagtgagagcgacacctcttcagacgaggagcccgacggcaaggactttggg
cggaagctcttctccccagtgatccgctccccaccgctgcccccctcctcgggtgccttt
gccccctgccgcccgccagccccccctgagctggacctgccccatggccccgaccagcca
cccctggccaagccctacagccccttcccgctggcgcccagcccgttcaaggcccaggac
tcgcggggggccccgccccccgcgccagccaagcgccctgagccggcacccccttaccgc
cggaagcgggctgacagcgctgggggggcggagacaggcgccgccgggccctcggtcatc
tccccccccggggggacgctgcaggcgctggtgctgcccgacccggggcgcctgtccgcg
ggcacggtgctggtgccggcgccctcgctcagcggctacggcggggcgccggtgcgccca
gcctccaccgtggtcaccaacgtggtcaagccggtgagcagcaccccggtgcccatcgcc
agcaagcccttcccccggggggtgggcgagggcgggcccctgctcagccccccagccctg
gagccggccccgccagccctggccgtgctggggggcgccaagcccgaggccgtgcctgtg
gggcgcatcggcctcctctacgccgacaagaagcccccgccccctgccagccaggccccc
tccccccacctggtggccgggcccctgctcgggccggtgcccaaggccccgggcaacgtg
gtgaccaacctgctggtggggcaggcggggggtgcgggggccgggccggccccagtgacc
gtgctgccaccgcagccctcggtgcagttcattacccagaacccctcggggtccgggccc
aatgggccggtgcccctgggcatcctgcagccccagggcctcctgtcgggggccccaggc
aaggcagggagcatcacccaggtgcagtacatcctgcccaccctaccccagcagctgcag
gtggctgggggcaagggggcaggggctggagccgccagcatccacttcaccctgcccccc
accagcagcaaggtgcttgccaccacgccccacggcctgcccatcctccagcccgggcct
ggcagcgccagcaccgccgtcaccgtcgtctccaccgcgcccaaagcccagtcagtgtct
ccggtgcaggccccaggccccggaggctctgcccacctggtgcagggcaaggtgctggta
cccgtggccgcgccccaggtgacggtgcggcccgggggtggggccggcccgatggcccag
gtggcgccgcccttcccggtgcccctgcagaacggagcccagcctgccagcaaggtcatc
cagctgacctcgttgacccctgctccgaacagtggcgccctggcgccccccctgagccca
gccacggccctcgtggggccccccggtcaggcccagaaggtgctgctgccctcctcctcc
accaggatcacctatgtgcagtccacaggcgggcaccagctgaccctgggcacctcggcc
tccccctcgcagcctggcgccgcccccgctgccacctacgtgcaggcccctgtggggccg
gcccccatggccctgggcttcacggccatcgggcccagcgggccggctattgtacagccg
ctgctctcggggcagagccccctgctggccccggggcagatgggggtttccccgctgccc
agcccccagctgcccccctcctgcagcggcccggtgattacggccatctaccccggcccc
ccaaccgccggccccgccccgtcacccgcccacggtctcgtctacagcgtggccagcccc
gcccctgcacccatcctgcccaaggggagcagtgccggcagccagggcacactggggcct
ggacctatgggccccctcgccttccccccggcgcctgcccggcccccgcgccctccgccg
aagcccccccagaaggtgaaggccgccatcgccagcatccccgtgggctcctacgagtcg
gccccgtcacccggccctgcccggcctccaggagggcagcagacggagcctggggggccc
ccccgcgtctcccgggagctggagagcccaagggagcctccggagctgcctgacccctcc
cctccgccccagccccccagacccggcccagctccggagccggacagctgggatgggcgc
cccccctcgcccgcgcccccccagcacccagtgcctgaggctgagagcggtgagggctgg
agccagcgggaggccgtgccgggggccagcgaggaacgaacgccccgagagcaggcgagc
acccccggagctgccccggggggcaaggggccggagacgaccccccgggtgcctgtctcc
cccgactggagggtcccgggtcctgagagccgccctgaagtcccagcgccccctgctggc
tcctcgtcctcctctgcgctcagccccgcccctgctggctctggggaggggtcccggggg
gcaggtccgacccccggtgcacccgagggcccagagcgcaaggagggtgggggcggcaag
aaggtgaaggtccggcctcccccgctgaagaagaccttcgactcggtggacaacagggtt
ctgtcggaggtggatttcgaggagcgcttcgccgagctgcccgagttcaagcccgaggag
gttctgccctcgcccacgctgcagtccctggccacgtcgccccgcgccatcctgggcagc
taccgcaagaagcgcaagaactccaccgacctggactcctccgccgaggaccccatctca
cccaagcggaagatgcggcgccgctcgagctgcagctcggagcccaacacgcccaagagc
gccaagtgcgagggcgacatcttcaccttcgacaagacgggcgcggaggcggaggacgtg
ctgggggagctggagtacgagaaggtcccgtattcgtcgctgcgccggaccctggaccag
aggcgggcgctggtcatgcagctcttccaggaccacggcttcttcccctcagcccaggcc
acggccgcgttccaggcccgctactccgacatcttccccaccaaggtctgcctgcagctg
aagatccgcgaggtgcggcagaagatcatgcaggcggccacccccaccgagcaggcgccc
agcacccccgagccggggggcccaggcggtggcggagccgctgaggggcagcccccggag
cccgcgcccccccaggactcggacccgggggcagaggcgggtggcagcaccagctgggac
aatagccagacatctcccccggggggcgccgcaggcagtggcagatga
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