KEGG   Chelonia mydas (green sea turtle): 119564639
Entry
119564639         CDS       T02989                                 
Symbol
PER1
Name
(RefSeq) LOW QUALITY PROTEIN: period circadian protein homolog 1
  KO
K21944  period circadian protein 1
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmy03400]
    119564639 (PER1)
DNA repair and recombination proteins [BR:cmy03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    119564639 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS Diguanyl_cycl_sensor BRX_N
Other DBs
NCBI-GeneID: 119564639
NCBI-ProteinID: XP_037743532
LinkDB
Position
28:1951830..1970044
AA seq 1270 aa
MHPGALGSQEEPAGRGEVCSTKVTRDSPLSLYSLRLLRPDPSPAPTPAPPRGPGDVPGSS
PIMSASCEPGQTPFEGASVIGANSGAPRRTRAQRGAEPQGRATDDMDANSNGSSGNESHG
RDSLRSDCSSSGNGKDSALLETTESSKSTNSQSPSPPTSSIAYSLLSTSSEQDNPSTSGC
SSEQSARVKTQKELMKALKEMKIRLPSEKRGKGQSGTLATLQYALSCVKRVQASHDYYQQ
WTLDESQPCHLDVASYTVAELEGMTSEYTRKNPDTFAVAVSFVTGKILYISDQAALVLHC
KREVFKGATFAEFLAPQDVSIFYASTAPYHLPSWSACTSATAAAVGYTQEKSVFCRISGG
RARGRELSYSPFRLTPYLAKVRPSDSAEGQPCCLFIAERIHSGYEAPRIPTDKRIFTTRH
TPGCLFQDVDERAAPLLGYLPQDLIGTPVLFYLHPEDRPLMLAIHKKILQYGGQPFDHSP
LRFCTRNGEYVTIDTSWSSFVNPWSRKVSFVMGRHKVRTGPLNEDVFTAPKALKMRPLEP
DIQELSEQIHRLLLQPVHSNGSVGLCSMASNASHEQFLSAASSSDSNGLPAEETQAQRPM
TFQQFCKDVHMVKNQGQQVFIESRAKPPAAKPPRAGPETPQDGGGPGREAPCEVQRGPGH
VVASEESGRKEASSYSYQQINCLDGIIRYLESCNIPSRVKRKCGSSSYTGSSNSDDDKQR
AGREPASSAKDAAEEMQPSQPRREEEEPAAAVGPPLAPLALPSKAESVVSVTSQCSFSST
IVHVGDKKAPESDTAMLEEGPGPRPPPDREQYRRVGLTKEVLSVHTQQEELAFLTRFQEL
SQLHVFDSPAGQGAEPGHRGPRRGAGRRGKSKAKRVKQHKASDSTGSPPPPGPWPPRPPP
LPFPAVVPVFPPSQPPAEPPPHFPAPLVAPVVALMLPNYVLPPPYFPAPFGGEPFGPPEA
SRSTTPERPHSPPFDSRCSSPLQLNLLQMEEAPKVSERQEAPGGQPGPGSSGAGGPPGAG
ELGPQKETCLVEAQDSSNNDALSSSSDLLDLLLQEDSRSGTGSAASGSGSMGSGSGGGST
SACGTTSSKSSHTSKYFGSIDSSEPERAGQPPGVGGGVGGAGEQFVKYVLQDPLWLLMAN
TDEKVMMTYQLPARPTAAVLQADREKLREMQKHQPRFTEEQKKELAAVHPWVKKGLLPKA
INVTACLDCGSHPAPRLAPLFDTEPHAMELSATLEPMEEGSGAPPCPDTAMEEEEAGQPA
RPQAGAENAG
NT seq 3813 nt   +upstreamnt  +downstreamnt
atgcaccctggagccctgggcagccaggaggaaccggccggccgtggtgaggtttgcagc
accaaagtcaccagagactccccgctgtcactgtacagcctacgacttctccgaccggat
ccgtctcctgccccgacccctgcgcctccccgcgggccgggtgatgtccccgggtcctcc
ccgatcatgagtgccagctgcgagccgggccagacgcccttcgagggggcgagcgtgatt
ggggccaactccggagccccccggcggacccgggcccagcgaggggccgagccccagggc
cgggccaccgacgacatggatgccaacagcaacgggtccagcggcaacgagtcgcacggc
cgggactccctgcggagcgactgcagcagcagcgggaacggcaaggactcggccctgctg
gagaccaccgagagcagcaagagcaccaactcccagagcccgtcgccccccaccagctcc
atcgcctacagcttgctgagcaccagctccgagcaggacaacccctccaccagcggctgc
agcagcgagcagtccgcgcgggtgaagacccagaaggagctgatgaaggcgctgaaggag
atgaagatccggctgccctcggagaaacgcggcaagggccagtcgggcaccttggccacc
ctgcagtacgcgctgtcctgcgtcaaacgggtccaagccagccatgactattaccagcag
tggaccctcgacgagagccagccctgccacctggatgtggccagttacaccgtcgccgag
ctggagggcatgacctccgagtacacccgcaagaaccccgacacgttcgccgtggccgtc
tcctttgtcaccggcaagatcctgtacatctcggaccaggcggccctcgtcctgcattgc
aagagggaggtcttcaagggggccaccttcgccgagttcctggccccccaggacgtcagc
atcttctacgcctccaccgccccctaccacctgccctcctggagcgcctgcacctcggcc
actgcggccgccgtgggctacacccaagagaaatcggtcttctgccggatcagcggaggc
cgcgcccgtgggcgggagctgtcttactcccccttccggctcaccccctacctggccaag
gtgcgcccctcggacagcgccgagggccagccctgctgcctgttcatcgccgagcgcatc
cactcgggatacgaagctccccggatcccgaccgataagcggatcttcaccaccaggcac
acccccggctgcttgttccaggacgtggacgagagggctgcccccttgctgggttacctc
ccccaggacctgattggcacgcccgtcctcttctacctgcacccggaggacaggccgctc
atgctggccatccacaaaaaaattctccagtacggcgggcagcccttcgaccactccccg
ctccgtttctgcacccgcaacggcgagtacgtcaccatcgacaccagctggtccagcttc
gtcaacccctggagccgcaaggtctccttcgtcatggggcgccacaaagtgcgcacgggt
cccctcaacgaagacgtcttcacggcccccaaggcgctcaagatgcggccgctggagccc
gacatccaggagctctcggagcagatccaccggctgcttctccagcctgtgcacagcaat
ggctccgtggggctctgcagcatggccagcaacgcgtcccacgagcagttcctgagcgcg
gcctcctccagcgacagcaacggcctccccgccgaggagacgcaggcccagcggccgatg
accttccagcagttctgcaaggacgtgcacatggtgaagaaccagggccagcaggtgttc
atcgagtcccgcgccaagccgccggctgccaagcccccccgcgcaggcccggagacaccc
caggatggtggcgggccgggcagggaggccccttgtgaggtgcagcggggcccgggccat
gtggtggcttccgaggagtcgggcaggaaggaggcctccagttactcctaccagcaaatc
aactgcctggacgggatcatcaggtatctggaaagctgcaacatccccagccgggtgaag
cggaaatgcggctcttcgtcctacaccggctcctccaactccgacgacgacaaacagagg
gcaggcagggagccggccagctcggcaaaagatgcggcggaggaaatgcagccgagccag
cccaggagggaggaggaggaacccgccgcggcggtgggacccccgctggccccgctggcc
ttgcccagcaaagccgaaagcgtggtgtccgtcaccagtcagtgtagcttcagcagtacc
atcgtccacgtgggagataagaaagccccggaatcggacacagcgatgctggaggagggc
cccgggccgcgccccccccctgaccgggagcagtaccgccgcgtggggctcaccaaggag
gtgctgtccgtccacacccagcaggaggagctggctttcctcacccgcttccaggagctg
agccagctccacgtcttcgactcgccagccgggcagggtgccgagccagggcaccgcggc
ccgcggcggggcgccggccggcgtggcaaatccaaggccaagcgtgtcaagcagcacaag
gcgtccgacagcaccggctccccgcctcccccgggcccctggcccccgcggccccccccc
ctgcccttccccgccgtggtgcccgtcttcccgcccagccagccccccgccgagcccccc
ccccacttccccgcccctctggtggcccccgtggtggccctgatgctgcccaactacgtc
ctgcccccgccgtacttcccggcccccttcgggggggagcccttcggcccccctgaggcc
tcgcgctccaccacgcccgagcggccccactcgccccccttcgactcccgctgcagctcc
ccactccagctcaacctgctgcagatggaggaggcccccaaggtgtccgagcggcaggag
gcgcccggtggccagcccgggccgggaagcagtggggccggcgggccgccgggggccggc
gagctcggcccgcagaaggaaacctgcctggtggaagctcaggactcctccaacaacgac
gccctgtccagctccagcgacctgctggacctgttgctgcaggaggactcgcgctccggg
accggctcggccgcctcgggcagcggctccatgggctccggctccggggggggcagcacc
tcagcctgcggcaccaccagcagtaagagcagccacaccagcaagtacttcggcagcatc
gactcgtcggagccggagcgggcggggcagccaccgggcgtgggcgggggcgtgggcggg
gctggcgagcagttcgtcaagtacgtgctgcaggaccccctctggctgctcatggccaac
acggacgagaaggtgatgatgacctaccagctgcccgcccgccccacggccgccgtgctc
caggccgaccgggagaagctgcgggagatgcagaagcaccagccgcgcttcaccgaggag
cagaagaaggagctggccgcggtgcacccttgggtgaagaaggggctgctgcccaaggcc
atcaacgtcacggcctgcctggactgtggcagtcacccagccccccgcctggcgcccctc
ttcgacacggagccgcacgccatggagctgagtgccacgctggagcccatggaggagggc
agcggtgcccccccctgcccggacacggccatggaggaggaggaggccgggcagccagcc
cggccccaggcgggcgccgaaaacgctggctga

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