Chlamydia muridarum Nigg3 CMUT3-5: TAC_01215
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Entry
TAC_01215 CDS
T03684
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cmz
Chlamydia muridarum Nigg3 CMUT3-5
Pathway
cmz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TAC_01215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmz03019
]
TAC_01215
03016 Transfer RNA biogenesis [BR:
cmz03016
]
TAC_01215
Enzymes [BR:
cmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TAC_01215
Messenger RNA biogenesis [BR:
cmz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TAC_01215
Transfer RNA biogenesis [BR:
cmz03016
]
Prokaryotic type
tRNA degradation factors
TAC_01215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
AHH22621
LinkDB
All DBs
Position
complement(271950..274031)
Genome browser
AA seq
693 aa
AA seq
DB search
MAFETFSVALDKDKTLIFETGKIARQANGAVLVKMNETWVFSSACAASLSEAVDFLPFRV
DYQEKFSSAGKTSGGFLKREGRPSEKEILISRLIDRSLRPSFPNRLMQDIQVLSYVWSYD
GKTLPDPLAICGASAALAISEVPQNCIVAGVRVGLVEGKWVVNPTKDELDASKLDLVMAG
TASAVLMIEGHCDFLTEEQVLEAIAFGQKYIAKICDAIEAWQKAIGKEKQLSAVLDLPED
VQNVVSNFIREKFEKALSFRDRDALEQVSKELEESVVANLVQEESDFSLLNVKAAFKNAK
SNQMRALIRDLGIRVDGRSTTEIRPISIEVSFLPRTHGSCLFTRGETQSVAVCTLGGESM
AQRFEDLNGDGAARFYLQYFFPPFSVGEVGRIGSPGRREIGHGKLAEKALSHVLPEASRF
PYTVRVESNITESNGSSSMASVCGGCLSLMDAGVPIKAPVAGIAMGLILDQDKAIVLSDI
SGIEDHLGDMDFKVAGTEEGITAFQMDIKVEGITHEIMEQALAQAKQGRSHILNLMTQVM
SSPNDSVSRYAPRIETMQINTSKIATVIGPGGKQIRQIIERSGAQVDINDNGLINISANT
QESIDKAKELIEGLTGEVEVGKIYNGRVTSVVAFGAFVEVLPGKEGLCHISELSKQKVDN
VADFVKEGDRLAVKLLSINEKGQLKLSHKATLE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgagactttttctgttgcgttagacaaagataagacactgattttcgagaca
gggaaaatagctcgccaagccaatggagctgttcttgtcaaaatgaatgaaacttgggtt
ttttcatcagcgtgcgcggcctctttatcagaggccgtagattttctgcctttcagagta
gactatcaagaaaagttttcctccgcggggaaaacctctggaggatttctgaaacgcgaa
ggtcgtccctccgagaaagaaattcttatttctcgactgatagatcgctctttgcgtcca
tcattccctaatagacttatgcaagacattcaagtcttgtcctacgtttggtcttatgac
gggaaaactttaccagaccccttagctatttgtggagcttctgcagctttagctatctca
gaggtccctcagaattgtattgttgcaggtgtacgcgtcggtctcgtcgaaggaaaatgg
gtagttaacccaactaaagatgagttagacgcatccaagcttgatctcgttatggcagga
acagcttctgcggtattaatgatcgaaggtcattgcgactttttgactgaagagcaagtt
ttagaagctattgcttttggacaaaaatacatagctaaaatatgtgacgctattgaagct
tggcagaaagcgattggtaaggaaaaacagctctcggctgtccttgatctgccggaagat
gtgcaaaatgttgtttcgaattttattagagaaaaattcgaaaaagcactgtcttttaga
gatagagacgctttagaacaagtctcaaaagagttagaagaatctgttgtcgccaactta
gttcaagaagaaagtgatttttctttattgaacgtgaaagctgcatttaagaatgcaaaa
tccaatcaaatgcgagctttaattagagatctcggcattcgcgtagacggacgaagtaca
acagaaattcgccctatttccatagaagtctctttccttccacgaacacatggaagctgc
ctatttacccgtggagaaacacaaagtgtagctgtatgcacacttgggggtgaaagtatg
gcacaacgatttgaagacctaaatggggatggagcagcgcgcttttatttgcagtatttt
ttccctcctttctctgtaggagaagttggtagaatcggatctccagggagacgcgaaata
ggtcacggaaaattagctgaaaaagctttaagtcatgtccttcctgaagcatctcgattc
ccttacactgttcgagtggagtctaatattacagaatccaatgggtcttcttctatggct
tctgtatgtgggggctgtctttctctgatggatgcaggagtgcctatcaaagctcctgta
gccggcattgctatgggtctaatcctagatcaagataaggctattgtcctttctgatatt
tcagggatagaagatcatctcggcgatatggattttaaagtcgcgggaactgaagaagga
atcacagcattccaaatggacattaaagtagaaggaattacccatgagatcatggagcag
gcgttggcccaagctaagcaaggtcgaagccatatcctaaatcttatgacacaggtaatg
tcttctcctaatgattctgtttccagatatgctcctcgtattgaaactatgcaaatcaat
acttcaaaaatcgcgacagtaataggtcctggagggaaacagatccgtcaaattattgag
cgatcaggagctcaagttgacattaacgataacgggctcattaacatatcagctaacacc
caagaatctatcgataaagctaaggagcttattgagggattaacgggagaagttgaggtt
ggcaagatctataacggccgagtcacttccgttgtggcctttggagcatttgtagaagtc
cttcctggtaaagagggtctttgtcatatttcagaattgtctaaacaaaaagtagacaat
gtagctgatttcgtaaaagaaggtgatcgcctagcggttaagttgctcagcatcaatgag
aaggggcaactaaaacttagccataaagcaactttagaatag
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