Croceicoccus naphthovorans: AB433_00175 Help Entry AB433_00175       CDS       T03964                                  Name (GenBank) RNA polymerase sigma54 factor   KO K03092   RNA polymerase sigma-54 factor Organism cna  Croceicoccus naphthovorans Pathway cna02020   Two-component system cna02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:cna00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     AB433_00175  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     AB433_00175  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cna03021]     AB433_00175 Transcription machinery [BR:cna03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      AB433_00175 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Sigma70_r4 HTH_IclR LacI Motif Other DBs NCBI-ProteinID:  AKM08772 UniProt:  A0A0G3XC62 LinkDB All DBs Position complement(32186..33628) Genome browser AA seq 480 aa AA seqDB search MALGPRLDLRQSQSLVMTPQLQQAIRLLALSNLELEAAIAEAVADNPLVDLAREEGEAAA PAVSEAPDEAVPGEGGDGEAALDIAGEMLDRDYDTGSGSVAGSGDELPDIGERAAGEMTL AEYLHDQIGAAGGTASQQFAARWIIDQLDEAGYLTIPLGEVAETLGISLAEAEAALRLVQ SLDPTGVGARDLAECLALQAIETDRYDPCMKALIANLDLLARGNLPQLRRLCRVDDEDLA DMIAELRSYDPKPGCRIGGGAAAPVVPDVFVGGDGSGGWAISLNRQTLPRLVIDRAYYTT LKAGCGKDKSAAGWLGEKLADANWLLKALDQRQKTILKVSREIVRRQEGFFRRGVSALIP LTLREVAEAVDLHESTVSRVTSNKFLNCGRGTFELKYFFSSGVAASGEAGAASAEAVKAA IKALIDAEKPDAILSDDTLVDLLKEKGFALARRTVAKYREAIGLGSSVQRRRTKKLAGAR NT seq 1443 nt NT seq  +upstreamnt  +downstreamnt atggcactgggtccccgtctcgacctgcggcagtcgcaatcgctggtgatgacgccgcag ttgcagcaggcgatccgcctgctcgcgctgtcgaacctggaactggaagccgcgattgcc gaggcggtggcggacaatccgctagtcgatcttgcccgtgaagagggcgaggcggcagcg cccgccgtatcggaagcgcccgacgaagccgttccgggcgagggcggcgatggtgaggcc gcattggatatcgcgggtgagatgctggaccgcgattacgacaccggctccggcagcgtg gcgggatcgggcgacgagctgcccgacatcggcgagcgtgcggctggcgaaatgacgctg gccgaatacctgcacgaccagatcggcgcggctggcgggacagcgtcgcagcaattcgca gcccgctggatcatcgaccagttggacgaagccggatatctgaccatcccgctgggcgag gtagccgaaacactgggcatctctctggccgaggcggaggcggcgttgcgtcttgtgcag tcgctcgacccgaccggcgtgggcgcgcgggacttggccgaatgccttgcgctgcaggcg atcgagactgaccgttacgatccgtgcatgaaggcgttgatcgccaacctcgatctgctt gcgcgcggcaacctgccgcaactgcgccgcctttgccgcgtcgatgacgaggatctggcc gacatgatcgccgaactgcgcagctatgaccccaaaccgggttgtcgcatcggcggcggg gcggctgccccggtcgtgcccgatgtcttcgtcggcggtgacggcagcggcggctgggcg atttcattgaaccgccagaccctgccgcgactggtgatcgatcgcgcctattacaccacg ctgaaagccgggtgcggcaaggacaagagcgcggcgggctggctgggcgagaagctcgca gacgcgaactggctgttgaaggcgctggaccagcggcagaagaccatcctgaaagtctcg cgagagatcgtgcggcggcaggaagggttcttccgccgcggcgtcagcgcgctgatcccg ctgaccctgcgcgaggtggcagaggcggtggacttgcacgaatcgacggtcagccgcgtg accagcaacaagttcctcaactgcgggcgcgggaccttcgagctaaagtactttttctcg tccggtgttgcagccagcggggaggcgggagcggccagcgcagaggcggtcaaggctgcg atcaaagcgctgatcgacgcggaaaagcccgatgcgatcctgtcggacgacacgttggtc gacctcttgaaggaaaagggcttcgccctcgcgcggcggaccgtggcgaagtaccgcgag gcgatcgggctgggcagttcggttcagcggcggcggacgaaaaagctggccggggcgcgt tag

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