Croceicoccus naphthovorans: AB433_01600
Help
Entry
AB433_01600 CDS
T03964
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
cna
Croceicoccus naphthovorans
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cna03032
]
AB433_01600
03036 Chromosome and associated proteins [BR:
cna03036
]
AB433_01600
03400 DNA repair and recombination proteins [BR:
cna03400
]
AB433_01600
DNA replication proteins [BR:
cna03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AB433_01600
Chromosome and associated proteins [BR:
cna03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AB433_01600
DNA repair and recombination proteins [BR:
cna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AB433_01600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
TetR_C_30
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AKM08961
UniProt:
A0A0G3XE94
LinkDB
All DBs
Position
complement(319523..319804)
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELIQALAEENPELRPEEVEAVVSCFFEAITERLASGGRVELRGFGAFSTRERSART
GRNPRTGETVEVPGKKVPYFKAGKDMRDRLNAD
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgattagatctgaattgattcaggcattggcggaagaaaacccggagcttcgtcccgaa
gaggtcgaggccgtggtttcctgtttcttcgaagccattaccgaacgactggccagcggt
ggccgcgttgaactgcgcggattcggcgccttttcgacccgcgaacgctccgcgcgcaca
ggccgcaacccgcgcactggcgagacggtagaggtaccgggcaagaaggtcccctatttc
aaggccggcaaggacatgcgtgaccggctgaacgccgactga
DBGET
integrated database retrieval system
