Croceicoccus naphthovorans: AB433_04075
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Entry
AB433_04075 CDS
T03964
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cna
Croceicoccus naphthovorans
Pathway
cna03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB433_04075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cna03400
]
AB433_04075
DNA repair and recombination proteins [BR:
cna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB433_04075
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB433_04075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
DUF87
SWI2_SNF2
AAA_19
Microtub_bd
nSTAND_NTPase5
AAA
SRP54
Motif
Other DBs
NCBI-ProteinID:
AKM09345
UniProt:
A0A0G3XCR3
LinkDB
All DBs
Position
complement(802159..804345)
Genome browser
AA seq
728 aa
AA seq
DB search
MAELVIRRGLEEPDTSDNFVPHKPQRPEKSMPGKRFELVSEYQPAGDQPTAIEELVAAAQ
EGEKTQVLLGVTGSGKTFTMAKVIEEMQRPALILAPNKILAAQLYGEFKSFFPNNAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIG
SVETYSAMIFDIKKGETVDQREIIRKLVALQYKRNDTAFARGNFRVRGDSLEVFPSHYED
MAWRVSFFGDEIEEISEFDPLTGKTGASLDKVRIYANSHYVTPGPTMKQASEAIRFELAE
RLKELEAEGKLLEHQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PDNALLFVDESHQTVPQIGAMSKGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
IAVSATPGGWEMEETGGVFAEQVIRPTGLIDPPVEIKPVEDQVQDCINECKATAAKGYRT
LVTTLTKRMAEDLTEFMHEAGVKVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRMTGSMERAIAETD
RRRAKQEEYNLEHGITPATIKRNIHDIVADTASKDGVTVDTGDDERNNLVGHNLRAYIED
LEARMRAAAADLEFEEAGRLRDEIRRLENEELGLPEGEHKAPRVGRSNEGKPGTRKTRYG
KTQRKWKR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactcgtcatccgccggggtcttgaagagcccgacacgtcggacaacttcgtc
ccgcacaagccgcagcggcccgaaaagtcgatgcccggcaagcggttcgaactggtcagc
gaataccagcccgcaggcgaccagccgaccgcgatcgaagaactggtcgccgccgcgcag
gaaggcgagaagacgcaggtcctgttgggcgtaaccggcagcggcaagacgttcaccatg
gccaaggtgatcgaggaaatgcagcgccccgcgctgatacttgcgcccaacaagatcctt
gccgcgcagctttatggcgagttcaagagtttcttcccgaacaacgcggtcgagtatttc
gtcagctactacgactattaccagccggaagcctacgtcccccggtctgacacttacatc
gagaaggaaagctcggtgaacgaggcgatcgaccggatgcgccattcggccacgcgtgcg
ctgctcgaacgcgatgacgtgatcatcgtcgcctcggtttcgtgtctctacggcatcggc
tcggtcgagacgtactcggcgatgatcttcgacatcaagaagggcgagactgtcgaccag
cgcgagatcatccgcaaactggtcgccctgcaatacaaacgcaacgacaccgcctttgca
cgcggcaatttccgcgtgcgcggcgacagtctcgaagtgtttccttcgcactatgaagac
atggcctggcgggtcagcttcttcggcgacgagatcgaagagatcagcgaattcgatccg
ctgaccggcaagaccggggcgagcctcgacaaggtccgcatctatgccaactcgcactat
gtcacccccggcccgaccatgaagcaggcgagcgaggcgattcgcttcgaactggcagag
cggctgaaggaactggaagccgagggcaagctgctggagcatcagcggctggagcagcgc
acaaatttcgaccttgagatgatcgccgccaccgggtcttgcgcggggatcgagaactat
tcgcgcttcctgaccggacgcctgccgggtgaaccgccaccgacgctgttcgaatacctg
cccgacaatgcgttgctcttcgtggacgaaagccaccagaccgtgccgcagatcggcgcg
atgtccaagggcgatcaccggcgcaagatcacgctggccgaatacggctttcgcctgccc
agttgcatcgacaaccgcccccttcgtttcaacgagtgggatgcgatgcgcccgcagacc
atcgccgtgtccgccacccccggcgggtgggaaatggaggagacgggcggcgtctttgcc
gaacaggtcatccgccccaccggcctcatcgacccgccggtcgagatcaagccggtcgag
gatcaggttcaggactgcatcaacgagtgcaaggcgaccgcggcaaagggctatcgcacg
cttgtcaccaccctgaccaagcgcatggccgaggacctgaccgagttcatgcacgaggcg
ggcgtgaaggtccgttacatgcactccgacgtggagacgctggagcgtatcgaactgatc
cgtgacctgcggcttggcgtttacgacgtgctggtcgggatcaacctgctgcgcgagggg
ctggatattcccgaatgcgggctggtctgtattctcgacgccgacaaggaaggcttcctg
cgcagcgaaacatcgctgatccagaccatcggccgcgccgcgcgcaacgttgacggtcgg
gtcatcctctatgccgatcgcatgaccggcagcatggagcgcgcgatagcggaaaccgac
cgccgccgcgccaagcaggaggaatacaacctagagcacggcatcacgcccgcgacgatc
aagcgcaacattcacgacatcgtcgccgacaccgccagcaaggacggcgttaccgtcgat
accggcgatgacgaacgcaacaacctcgtcgggcacaacctgcgcgcctatatcgaggat
ctcgaagcccggatgcgcgccgccgccgccgatctggaattcgaagaggccggacgcttg
cgcgacgaaattcgacggttggagaacgaggaactcggtctgcctgaaggcgagcacaaa
gcccctcgggtcggacggtctaatgagggcaaacccggcacgcgcaagacgcgctatggc
aagacccaacggaagtggaagcgctga
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