KEGG   Croceicoccus naphthovorans: AB433_04075
Entry
AB433_04075       CDS       T03964                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
cna  Croceicoccus naphthovorans
Pathway
cna03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AB433_04075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cna03400]
    AB433_04075
DNA repair and recombination proteins [BR:cna03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AB433_04075
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AB433_04075
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H Kinesin DUF87 SWI2_SNF2 AAA_19 Microtub_bd nSTAND_NTPase5 AAA SRP54
Other DBs
NCBI-ProteinID: AKM09345
UniProt: A0A0G3XCR3
LinkDB
Position
complement(802159..804345)
AA seq 728 aa
MAELVIRRGLEEPDTSDNFVPHKPQRPEKSMPGKRFELVSEYQPAGDQPTAIEELVAAAQ
EGEKTQVLLGVTGSGKTFTMAKVIEEMQRPALILAPNKILAAQLYGEFKSFFPNNAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIG
SVETYSAMIFDIKKGETVDQREIIRKLVALQYKRNDTAFARGNFRVRGDSLEVFPSHYED
MAWRVSFFGDEIEEISEFDPLTGKTGASLDKVRIYANSHYVTPGPTMKQASEAIRFELAE
RLKELEAEGKLLEHQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PDNALLFVDESHQTVPQIGAMSKGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
IAVSATPGGWEMEETGGVFAEQVIRPTGLIDPPVEIKPVEDQVQDCINECKATAAKGYRT
LVTTLTKRMAEDLTEFMHEAGVKVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRMTGSMERAIAETD
RRRAKQEEYNLEHGITPATIKRNIHDIVADTASKDGVTVDTGDDERNNLVGHNLRAYIED
LEARMRAAAADLEFEEAGRLRDEIRRLENEELGLPEGEHKAPRVGRSNEGKPGTRKTRYG
KTQRKWKR
NT seq 2187 nt   +upstreamnt  +downstreamnt
atggcagaactcgtcatccgccggggtcttgaagagcccgacacgtcggacaacttcgtc
ccgcacaagccgcagcggcccgaaaagtcgatgcccggcaagcggttcgaactggtcagc
gaataccagcccgcaggcgaccagccgaccgcgatcgaagaactggtcgccgccgcgcag
gaaggcgagaagacgcaggtcctgttgggcgtaaccggcagcggcaagacgttcaccatg
gccaaggtgatcgaggaaatgcagcgccccgcgctgatacttgcgcccaacaagatcctt
gccgcgcagctttatggcgagttcaagagtttcttcccgaacaacgcggtcgagtatttc
gtcagctactacgactattaccagccggaagcctacgtcccccggtctgacacttacatc
gagaaggaaagctcggtgaacgaggcgatcgaccggatgcgccattcggccacgcgtgcg
ctgctcgaacgcgatgacgtgatcatcgtcgcctcggtttcgtgtctctacggcatcggc
tcggtcgagacgtactcggcgatgatcttcgacatcaagaagggcgagactgtcgaccag
cgcgagatcatccgcaaactggtcgccctgcaatacaaacgcaacgacaccgcctttgca
cgcggcaatttccgcgtgcgcggcgacagtctcgaagtgtttccttcgcactatgaagac
atggcctggcgggtcagcttcttcggcgacgagatcgaagagatcagcgaattcgatccg
ctgaccggcaagaccggggcgagcctcgacaaggtccgcatctatgccaactcgcactat
gtcacccccggcccgaccatgaagcaggcgagcgaggcgattcgcttcgaactggcagag
cggctgaaggaactggaagccgagggcaagctgctggagcatcagcggctggagcagcgc
acaaatttcgaccttgagatgatcgccgccaccgggtcttgcgcggggatcgagaactat
tcgcgcttcctgaccggacgcctgccgggtgaaccgccaccgacgctgttcgaatacctg
cccgacaatgcgttgctcttcgtggacgaaagccaccagaccgtgccgcagatcggcgcg
atgtccaagggcgatcaccggcgcaagatcacgctggccgaatacggctttcgcctgccc
agttgcatcgacaaccgcccccttcgtttcaacgagtgggatgcgatgcgcccgcagacc
atcgccgtgtccgccacccccggcgggtgggaaatggaggagacgggcggcgtctttgcc
gaacaggtcatccgccccaccggcctcatcgacccgccggtcgagatcaagccggtcgag
gatcaggttcaggactgcatcaacgagtgcaaggcgaccgcggcaaagggctatcgcacg
cttgtcaccaccctgaccaagcgcatggccgaggacctgaccgagttcatgcacgaggcg
ggcgtgaaggtccgttacatgcactccgacgtggagacgctggagcgtatcgaactgatc
cgtgacctgcggcttggcgtttacgacgtgctggtcgggatcaacctgctgcgcgagggg
ctggatattcccgaatgcgggctggtctgtattctcgacgccgacaaggaaggcttcctg
cgcagcgaaacatcgctgatccagaccatcggccgcgccgcgcgcaacgttgacggtcgg
gtcatcctctatgccgatcgcatgaccggcagcatggagcgcgcgatagcggaaaccgac
cgccgccgcgccaagcaggaggaatacaacctagagcacggcatcacgcccgcgacgatc
aagcgcaacattcacgacatcgtcgccgacaccgccagcaaggacggcgttaccgtcgat
accggcgatgacgaacgcaacaacctcgtcgggcacaacctgcgcgcctatatcgaggat
ctcgaagcccggatgcgcgccgccgccgccgatctggaattcgaagaggccggacgcttg
cgcgacgaaattcgacggttggagaacgaggaactcggtctgcctgaaggcgagcacaaa
gcccctcgggtcggacggtctaatgagggcaaacccggcacgcgcaagacgcgctatggc
aagacccaacggaagtggaagcgctga

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