KEGG   Croceicoccus naphthovorans: AB433_05955
Entry
AB433_05955       CDS       T03964                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
cna  Croceicoccus naphthovorans
Brite
KEGG Orthology (KO) [BR:cna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cna03016]
    AB433_05955
Enzymes [BR:cna01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     AB433_05955
Transfer RNA biogenesis [BR:cna03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    AB433_05955
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: AKM09628
UniProt: A0A0G3XH01
LinkDB
Position
complement(1173972..1174508)
AA seq 178 aa
MSHRLFIAIRPPEPVIDAMIDVMDGIENARWQDEAQLHLTLRYVGEVDTPTANDIADALG
RIRFAPFDLTYRGVGHFERSHWPSAVWAGVVPSPGLDTLAKKVERACVSAGCAPETRRFT
PHVTLARLNRSSGPVGDWMARHGDFACAPVRVDHFTLYESTLSHSGSHYDPVVRFSLA
NT seq 537 nt   +upstreamnt  +downstreamnt
atgtcccaccgcctcttcatcgccatccgcccaccagaaccggtcatcgacgccatgatc
gacgtgatggacggcatcgagaacgcccgctggcaggatgaggcgcagttgcacctgacg
ctgcgctatgtgggcgaagtcgatacccccaccgccaacgacatcgccgatgcgctgggc
cgcatacgtttcgcaccgttcgacctgacctatcgcggcgtcgggcatttcgagcggagt
cattggcccagcgccgtctgggctggcgtggtgccctcgcccggactcgacacgctggcc
aagaaggtggagcgggcctgcgtttctgccgggtgcgcgcccgaaacgcggcggtttacg
ccgcatgtcacgctggcgcggcttaaccgcagcagcggcccggtgggcgactggatggcc
cggcacggcgactttgcctgtgcgccggtgcgggtcgatcatttcactctctacgaaagc
acgctgtcgcacagcggatcgcactatgatccggtggtgcggttcagccttgcttga

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