Croceicoccus naphthovorans: AB433_09210
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Entry
AB433_09210 CDS
T03964
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
cna
Croceicoccus naphthovorans
Pathway
cna00730
Thiamine metabolism
cna01100
Metabolic pathways
cna01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AB433_09210
Enzymes [BR:
cna01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AB433_09210
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AKM10113
UniProt:
A0A0G3XIF3
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All DBs
Position
complement(1807342..1809210)
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AA seq
622 aa
AA seq
DB search
MADINSKLEIGVTTGPIRGSKKVHVGNRRVAMREISLEPSSGEPPVRVYDTSGPYTDPNA
TIDIQAGLPSLRREWIMGRGDVEEYDARLVKPEDNGQLGPDRSGGVPAFPNVVQRPLRAK
AGQNVSQMHYARRGIITPEMEYVAERENLGREFVRREIEGNSWGAAIPEYVTPEFVRDEV
ARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVAAEVDKMVWSIRWGADTV
MDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGIAEELTWEIFRDTLIEQAEQGV
DYFTIHAGVRLPYVPLAAKRMTGIVSRGGSIMAKWCLAHHKESFLYERFDDITEIMKAYD
IAYSLGDGLRPGSIYDANDEAQFAELYTLGELTKRAWEQDVQVMIEGPGHVPMHKIKENM
DKQLEACGEAPFYTLGPLVTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPDR
DDVKVGVVTYKLAAHAADLAKGHPAAQVRDDALSKARFEFRWRDQFNLSLDPDTAEQYHD
QTLPAEGAKTAHFCSMCGPKFCSMKISQEVREFAAKQNQPSDRFLAADASAEDAEKGMAE
MSKVFKETGSELYMGAGDREHD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcaacagcaagctcgaaatcggcgtaacgaccggtccgatccgtggttcg
aagaaggtccacgtcggcaaccgccgcgtcgctatgcgcgaaatcagcctggaaccgtca
agcggggagccgccggtgcgcgtgtacgacaccagcgggccgtacaccgaccccaatgcc
accatcgacattcaggcgggcctgccttcgctgcgccgcgaatggatcatgggccgcggc
gatgtcgaggaatacgacgcgcggcttgtgaagccggaagacaacggccagctcggcccc
gaccgcagcggcggcgtgcccgcgttccccaacgtcgtccagcggcccctgcgcgccaag
gcgggccagaacgtcagccagatgcactatgcccgccgcggcatcatcacgcccgaaatg
gaatacgtggcagagcgtgagaaccttggccgcgaattcgtgcggcgcgagatagagggc
aattcgtggggtgccgccatccccgaatacgtcaccccggaattcgtgcgggacgaagtg
gcgcgcggccgggcgatcatcccgtccaacatcaaccacccggaaagcgaaccgatggcc
atcggtcgcaacttcctcgtcaagatcaatgccaacatcggcaattccgccgtggcgtcc
gacgtggcggcagaggtcgacaagatggtctggtcgatccgctggggcgcggacacggtg
atggacctgtccacgggccgcaacatccacgacacgcgcgaatggatcatccgcaacagc
cccgtgcccatcggcaccgttcccatctatcaggcgctggaaaaggtcggcggcattgcc
gaggaactgacgtgggagattttccgcgacacgctgatcgaacaggccgaacaaggcgtc
gattacttcaccatccacgccggcgtgcgcctgccctatgtgccgctggcggccaagcgg
atgaccgggatcgtcagccgcggcggatcgatcatggcgaagtggtgccttgcccaccac
aaggaatcgttcctgtatgaacggttcgacgacattacagagatcatgaaggcctatgac
atcgcctattcgctgggcgacggtctgcgccccggctctatctatgacgcgaatgacgag
gcgcagttcgcagaactctacacgctgggagagctgaccaagcgcgcgtgggagcaggac
gttcaggtcatgatcgaaggccccggccacgtgccgatgcacaagatcaaggagaacatg
gacaagcagctggaagcctgcggcgaggctccgttctacaccctcggccccctcgtcacc
gacatcgcgccggggtacgaccatatcaccagcggcatcggcgcggcgcagatcggctgg
tacggcacggcgatgctttgctacgtcacgcccaaggaacaccttggcttgcccgaccgt
gacgacgtgaaggtcggcgtggtgacctacaagctggccgcccacgcggcggacctggcc
aagggccacccggcggcacaggtgcgcgacgatgcgctgtcaaaagcccgcttcgaattc
cgctggcgcgaccagttcaacctgtcgctcgatcccgacacggcggaacagtaccacgac
cagaccctcccggcagagggcgcaaaaaccgcgcacttctgctccatgtgcgggccgaag
ttctgctcgatgaagatttcgcaggaggtgcgggaattcgcggcgaagcagaaccagccg
tcggaccggttccttgccgccgatgcctcagccgaggatgcggagaagggcatggcggag
atgagcaaggtgtttaaggaaaccggctcggagctttacatgggtgccggggatcgggag
cacgattga
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