Croceicoccus naphthovorans: AB433_10680
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Entry
AB433_10680 CDS
T03964
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cna
Croceicoccus naphthovorans
Pathway
cna03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB433_10680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cna03400
]
AB433_10680
DNA repair and recombination proteins [BR:
cna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB433_10680
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB433_10680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
AAA_16
AAA_29
DnaJ_CXXCXGXG
DUF4350
RsgA_GTPase
AAA_15
MCR
Motif
Other DBs
NCBI-ProteinID:
AKM10311
UniProt:
A0A0G3XI59
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Position
2113529..2116120
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AA seq
863 aa
AA seq
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MQVRGARQNNLKNVDVDVPRDAFVVFTGISGSGKSSLAFGTLYAEAQRRYLESVAPYARR
LIDQAGVPEVDAIDGLPPAVALQQQRGSANARSSVGSVTTLSSLVRMLYSRVGEYPRYQP
MLYAEDFSPNTVAGACATCHGIGRVYDATEETMVPDDSLTIRDRAIAAWPTAWHGQNLRD
ILVSLGYDVDTPWRDLPKKDRDWILFTEEAPTVPVYAGLTPEQTRVALKRRMEPSYQGTF
TGARRYVLETFANTKSALMKKRVSQYIIGRDCPTCDGKRLKREALSVKFAGLDIAEFGDL
TVLKLKDLLMPVAHGEYGAVSDTSKGHVLEKAAREAAVEQRVAAGGSAHKSAPDVRRTPN
LSDEKRIAAQRLACELIERLEALIDLGLGYISLDRSTPTLSSGELQRLRLATQLSSQLFG
VVYVLDEPSAGLHPADGEALLTILERLKAAGNSLFVVEHDLDVIRHAEWLVDVGPGAGDK
GGEVLYNGPIEGLAHVETSITRRYLFAEPLRSERTPRDPKAWLRLEGIRRNNLQGLDVEF
PIGCFTAVTGVSGSGKSSLVSQALPELVTEHLGGSPVAEDEDIDPLLDVAQNDTEGRIVA
GMEHVRRLVRVDQKPIGRTPRSNLSTYSGMFDHVRRIFADTPLARRRHYSPGRFSFNVAQ
GRCPVCEGEGYVMVELLFLPSVFAPCSTCHGSRYNPQTLEVEWNGRNIAQVLELTVDDAC
DFFAGEASVMRSLDVLREIGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGNTIYILD
EPTSGLHPSDADRLMQHLQGLVDAGNTVVVVEHDMRAITQVDWVIDLGPGAGEDGGRIVA
SGVPGVVAEAEGSLTAPYLKAAL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggttcgtggcgcgcgccagaataacctaaaaaatgtggacgtcgatgtaccgcgt
gacgccttcgtggtgttcaccggcatatcgggttcgggcaagtcatcgctcgcgttcggc
accctttatgccgaagcccagcggcgttatctggaatcggttgcgccctatgcccgtcgc
ctgatcgaccaggccggcgtgccggaggtcgacgcgatcgacggattgccgcctgcggtc
gcgttgcagcagcagcgcggctcggccaacgcgcgatcctcggtcggcagcgtgacgacg
ctctccagcctggtgcggatgctctattcccgcgtcggcgaatatccgcgctatcagccc
atgctctatgcggaggatttctcccccaacacggtcgcgggggcctgcgcgacctgccac
ggcatcgggcgcgtatatgacgcgaccgaagagacgatggttcctgacgacagcctcacc
attcgcgatcgggcgatcgccgcctggccgaccgcctggcatggccagaacctgagggat
atcctcgtttcgctcggctatgacgtcgacacgccgtggcgggacttgccgaaaaaagat
cgcgactggatcctcttcactgaagaggcgccgacggtgccggtctatgcgggtctgacg
cccgaacagacccgcgtggcgctgaagcgccgcatggaaccgagctatcagggcaccttc
accggcgcccgccgctatgtgctggagaccttcgccaacacaaaaagcgcgctaatgaag
aagcgcgtctcgcaatatattatcggccgcgattgcccgacctgcgacggcaaacgcctg
aagcgcgaagccctgtcggttaaattcgccggcctcgacattgccgagttcggcgacctg
acggtgctcaagctgaaggacttgctgatgcccgtcgcgcatggcgagtatggggcagtc
tccgacacctcaaagggccatgttctggaaaaagcggcccgcgaagcagcggtcgaacaa
cgggttgccgcgggcggctctgcgcacaagagcgcgcccgacgtgcgccgcacgcccaat
ctctccgacgagaagcggatcgccgcccaacgccttgcctgcgaattgatcgagcggctc
gaggcgctgatcgatcttggccttggctacatttcgctcgaccgcagcacgccgacgctc
tcctccggagagttgcagcgcttgcggcttgccacccaattgtcgtcacagcttttcggc
gtggtctatgtgcttgacgagccttcggcagggttacatccggcagatggcgaagccttg
ctcactatcctcgagcgtctcaaggcggcgggcaactccctgttcgtcgtcgaacatgat
ctcgacgtgatccgccacgctgaatggctcgtcgatgtcgggccaggagccggggataag
ggcggtgaagtcctctacaacgggccgatagaggggcttgcccacgtcgagacttcgatc
acccgccgctacctgttcgcagagccgctccgcagtgagcgcacaccgcgcgatcccaag
gcatggctacgcctggaagggatcaggcgtaacaatcttcaaggtctcgacgttgagttt
cccatcggctgcttcaccgctgtcaccggcgtttcgggatcgggcaaatccagtcttgtc
agtcaggcgctgcccgagctcgtcacggaacacctcggcggctcccccgtggccgaggac
gaggatattgatccgctgctcgacgttgctcagaacgatactgaaggacgcattgtcgcg
ggcatggagcatgttcgcaggctggtgcgggtcgatcagaaaccgatcggccgcacgccg
cgctcgaacctatccacctacagcggcatgttcgaccatgtgcgacggatcttcgctgat
acgccgctcgcccgccggcgacactatagcccgggcaggttctcgttcaacgtcgcgcaa
ggtcgctgcccggtgtgcgagggcgagggatacgtcatggtggagctgctgttcctgccg
agcgtttttgcgccgtgctcgacctgtcatggctctcgctacaacccgcaaacgctcgaa
gtcgaatggaacgggcgcaatatcgcccaggtgctcgaactgacggtcgacgatgcgtgc
gatttcttcgctggcgaggcatctgtgatgcgctccctcgacgtgttgcgggagatcggt
cttggctatctgaggctcggacagcctgcgaccgagctgtctggcggggaggcgcagcgc
atcaagctggcgactgaactgcaacgcgcccagcgcggcaacacgatctacatcctcgac
gagcccacttcggggcttcacccctccgatgccgaccggctgatgcaacacctgcagggc
ctcgtcgacgctggcaataccgtcgtcgtcgtcgaacatgacatgcgcgccatcacgcag
gtggactgggtcatcgatctgggaccgggggctggggaagatggcggccgtatcgttgcc
agcggcgtccctggcgtcgttgcggaagcagaaggcagtctcaccgccccctatctcaaa
gcggcgctgtag
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