KEGG   Croceicoccus naphthovorans: AB433_10680
Entry
AB433_10680       CDS       T03964                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
cna  Croceicoccus naphthovorans
Pathway
cna03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AB433_10680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cna03400]
    AB433_10680
DNA repair and recombination proteins [BR:cna03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AB433_10680
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AB433_10680
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 nSTAND1 AAA_16 AAA_29 DnaJ_CXXCXGXG DUF4350 RsgA_GTPase AAA_15 MCR
Other DBs
NCBI-ProteinID: AKM10311
UniProt: A0A0G3XI59
LinkDB
Position
2113529..2116120
AA seq 863 aa
MQVRGARQNNLKNVDVDVPRDAFVVFTGISGSGKSSLAFGTLYAEAQRRYLESVAPYARR
LIDQAGVPEVDAIDGLPPAVALQQQRGSANARSSVGSVTTLSSLVRMLYSRVGEYPRYQP
MLYAEDFSPNTVAGACATCHGIGRVYDATEETMVPDDSLTIRDRAIAAWPTAWHGQNLRD
ILVSLGYDVDTPWRDLPKKDRDWILFTEEAPTVPVYAGLTPEQTRVALKRRMEPSYQGTF
TGARRYVLETFANTKSALMKKRVSQYIIGRDCPTCDGKRLKREALSVKFAGLDIAEFGDL
TVLKLKDLLMPVAHGEYGAVSDTSKGHVLEKAAREAAVEQRVAAGGSAHKSAPDVRRTPN
LSDEKRIAAQRLACELIERLEALIDLGLGYISLDRSTPTLSSGELQRLRLATQLSSQLFG
VVYVLDEPSAGLHPADGEALLTILERLKAAGNSLFVVEHDLDVIRHAEWLVDVGPGAGDK
GGEVLYNGPIEGLAHVETSITRRYLFAEPLRSERTPRDPKAWLRLEGIRRNNLQGLDVEF
PIGCFTAVTGVSGSGKSSLVSQALPELVTEHLGGSPVAEDEDIDPLLDVAQNDTEGRIVA
GMEHVRRLVRVDQKPIGRTPRSNLSTYSGMFDHVRRIFADTPLARRRHYSPGRFSFNVAQ
GRCPVCEGEGYVMVELLFLPSVFAPCSTCHGSRYNPQTLEVEWNGRNIAQVLELTVDDAC
DFFAGEASVMRSLDVLREIGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGNTIYILD
EPTSGLHPSDADRLMQHLQGLVDAGNTVVVVEHDMRAITQVDWVIDLGPGAGEDGGRIVA
SGVPGVVAEAEGSLTAPYLKAAL
NT seq 2592 nt   +upstreamnt  +downstreamnt
gtgcaggttcgtggcgcgcgccagaataacctaaaaaatgtggacgtcgatgtaccgcgt
gacgccttcgtggtgttcaccggcatatcgggttcgggcaagtcatcgctcgcgttcggc
accctttatgccgaagcccagcggcgttatctggaatcggttgcgccctatgcccgtcgc
ctgatcgaccaggccggcgtgccggaggtcgacgcgatcgacggattgccgcctgcggtc
gcgttgcagcagcagcgcggctcggccaacgcgcgatcctcggtcggcagcgtgacgacg
ctctccagcctggtgcggatgctctattcccgcgtcggcgaatatccgcgctatcagccc
atgctctatgcggaggatttctcccccaacacggtcgcgggggcctgcgcgacctgccac
ggcatcgggcgcgtatatgacgcgaccgaagagacgatggttcctgacgacagcctcacc
attcgcgatcgggcgatcgccgcctggccgaccgcctggcatggccagaacctgagggat
atcctcgtttcgctcggctatgacgtcgacacgccgtggcgggacttgccgaaaaaagat
cgcgactggatcctcttcactgaagaggcgccgacggtgccggtctatgcgggtctgacg
cccgaacagacccgcgtggcgctgaagcgccgcatggaaccgagctatcagggcaccttc
accggcgcccgccgctatgtgctggagaccttcgccaacacaaaaagcgcgctaatgaag
aagcgcgtctcgcaatatattatcggccgcgattgcccgacctgcgacggcaaacgcctg
aagcgcgaagccctgtcggttaaattcgccggcctcgacattgccgagttcggcgacctg
acggtgctcaagctgaaggacttgctgatgcccgtcgcgcatggcgagtatggggcagtc
tccgacacctcaaagggccatgttctggaaaaagcggcccgcgaagcagcggtcgaacaa
cgggttgccgcgggcggctctgcgcacaagagcgcgcccgacgtgcgccgcacgcccaat
ctctccgacgagaagcggatcgccgcccaacgccttgcctgcgaattgatcgagcggctc
gaggcgctgatcgatcttggccttggctacatttcgctcgaccgcagcacgccgacgctc
tcctccggagagttgcagcgcttgcggcttgccacccaattgtcgtcacagcttttcggc
gtggtctatgtgcttgacgagccttcggcagggttacatccggcagatggcgaagccttg
ctcactatcctcgagcgtctcaaggcggcgggcaactccctgttcgtcgtcgaacatgat
ctcgacgtgatccgccacgctgaatggctcgtcgatgtcgggccaggagccggggataag
ggcggtgaagtcctctacaacgggccgatagaggggcttgcccacgtcgagacttcgatc
acccgccgctacctgttcgcagagccgctccgcagtgagcgcacaccgcgcgatcccaag
gcatggctacgcctggaagggatcaggcgtaacaatcttcaaggtctcgacgttgagttt
cccatcggctgcttcaccgctgtcaccggcgtttcgggatcgggcaaatccagtcttgtc
agtcaggcgctgcccgagctcgtcacggaacacctcggcggctcccccgtggccgaggac
gaggatattgatccgctgctcgacgttgctcagaacgatactgaaggacgcattgtcgcg
ggcatggagcatgttcgcaggctggtgcgggtcgatcagaaaccgatcggccgcacgccg
cgctcgaacctatccacctacagcggcatgttcgaccatgtgcgacggatcttcgctgat
acgccgctcgcccgccggcgacactatagcccgggcaggttctcgttcaacgtcgcgcaa
ggtcgctgcccggtgtgcgagggcgagggatacgtcatggtggagctgctgttcctgccg
agcgtttttgcgccgtgctcgacctgtcatggctctcgctacaacccgcaaacgctcgaa
gtcgaatggaacgggcgcaatatcgcccaggtgctcgaactgacggtcgacgatgcgtgc
gatttcttcgctggcgaggcatctgtgatgcgctccctcgacgtgttgcgggagatcggt
cttggctatctgaggctcggacagcctgcgaccgagctgtctggcggggaggcgcagcgc
atcaagctggcgactgaactgcaacgcgcccagcgcggcaacacgatctacatcctcgac
gagcccacttcggggcttcacccctccgatgccgaccggctgatgcaacacctgcagggc
ctcgtcgacgctggcaataccgtcgtcgtcgtcgaacatgacatgcgcgccatcacgcag
gtggactgggtcatcgatctgggaccgggggctggggaagatggcggccgtatcgttgcc
agcggcgtccctggcgtcgttgcggaagcagaaggcagtctcaccgccccctatctcaaa
gcggcgctgtag

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