Croceicoccus naphthovorans: AB433_12270
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Entry
AB433_12270 CDS
T03964
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cna
Croceicoccus naphthovorans
Pathway
cna00300
Lysine biosynthesis
cna00470
D-Amino acid metabolism
cna01100
Metabolic pathways
cna01110
Biosynthesis of secondary metabolites
cna01120
Microbial metabolism in diverse environments
cna01230
Biosynthesis of amino acids
Module
cna_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB433_12270
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB433_12270
Enzymes [BR:
cna01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AB433_12270
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AKM10562
UniProt:
A0A0G3XHC2
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All DBs
Position
complement(2435059..2436318)
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AA seq
419 aa
AA seq
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MDHFQYRDGVLFAEDVALPTIAETVGTPVYVYSEATLRRHARVFREALSGVPRTHFAFAV
KSNPNLAVLRVLKDEGFGADVVSIGEARRALAAGMPAADIVFSGVGKTDAELDEAVEAGI
GQFNLESEEEGIELARIAHEKGLTATGALRVNPDVDAGTHDKISTGKADNKFGVPIFAAK
EIFARLAALPGMNLRGLAVHIGSQITNLDPSRAAFGKIGALVAELRADGHTITHVDLGGG
LGVPYRAGETLPTPAEYGALVAEVTADWDVTVMFEPGRVISGNSGVLVSQVIRVKRGANH
PFIVVDAAMNDLARPAMYDAWHDVVAVEPKGERLTANVVGPICESSDTFAKNREMDAVET
GDLVAFRTAGAYGATMANTYNSRPLVPEVLVSGDRYAVVANRIEPATILAAEQVPDWLK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtggaccatttccagtaccgtgatggcgtgctttttgccgaggacgttgccctgccgacc
atcgccgagacggtgggcacgccggtctatgtctattccgaagcgaccctgcgccgccat
gcgcgtgtgttccgcgaggcgttgagcggcgttccgcgtacgcatttcgctttcgcggtt
aagtcgaacccgaacctcgccgtgctgcgcgtgttgaaggacgaaggtttcggcgccgac
gtcgtctccatcggcgaagcgcgccgggcgctggcggctgggatgccggcagcggacatc
gtgttctctggcgtgggcaagaccgatgccgaactggacgaagcggtcgaggccggcatc
gggcagttcaacctcgaaagcgaggaagagggaatcgagctagcccgcatcgcgcatgaa
aagggtctgaccgcgacgggggcgctgcgtgtgaaccccgatgtcgatgccgggacgcat
gacaagatcagcaccggcaaggccgacaacaagttcggcgtgccgatctttgcggccaag
gaaattttcgcccggctggcggctctaccgggcatgaacctgcgcgggctggcggtgcat
atcggcagccagatcaccaacctcgatcccagccgcgccgcgttcgggaagattggcgcg
ctggtcgcggaactgcgcgcggatggccacacgatcacccacgtcgatctcggtggcggg
ttgggcgtgccctatcgcgcgggcgaaacactgccgacaccggcggaatacggcgcgctt
gtcgcggaagttacggcggactgggacgttaccgtcatgttcgaaccgggccgcgtgatt
tcgggcaattcgggcgtattggtcagccaggtaatccgggtaaagcgcggggcgaaccac
cctttcatcgtcgtcgacgccgcgatgaacgaccttgcccgcccggcgatgtacgacgcg
tggcacgatgtcgtcgcggtggagccgaagggcgagcggctgactgccaacgtcgtcggc
ccgatctgcgagagcagcgatacctttgccaagaaccgcgagatggacgcggtcgagacc
ggcgatctggtcgcttttcgaactgccggggcctatggcgcgacgatggccaatacctac
aactcgcgccccctggtgccggaagtcttggtcagcggcgaccgctatgccgtggtcgcc
aaccgcatcgaaccggcgacgatccttgccgccgaacaggtgccggactggctgaaatag
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