Croceicoccus naphthovorans: AB433_12310
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Entry
AB433_12310 CDS
T03964
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cna
Croceicoccus naphthovorans
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cna03032
]
AB433_12310
03400 DNA repair and recombination proteins [BR:
cna03400
]
AB433_12310
Enzymes [BR:
cna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB433_12310
DNA replication proteins [BR:
cna03032
]
Prokaryotic type
DNA Topoisomerases
AB433_12310
DNA repair and recombination proteins [BR:
cna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB433_12310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AKM10567
UniProt:
A0A0G3XHC5
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All DBs
Position
2441184..2442227
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AA seq
347 aa
AA seq
DB search
MASRANDIPKKPADSAGLIFVDDSLPGITRRRCGRGWSYRDAKGRRVADRNEIDRLNAIA
LPPAYTDAWFCPAPNGHILATGIDAKGRKQYRYHPRFRAERECEKFDRTIAFGKALPLLR
KRVEADLSTRGLNKARAIACVVRLLDLGRIRIGNETYAKSNKSFGATTLRQRHAKLSGRR
LRLRYKGKSNKLREVTLTDRSLLRFVKQIQDLPGQRLFQYLDDEGEPHAVASCDVNAYLR
EVMGEDFSAKDFRTFHASVLAFTALADAEEKVTIKAMLELVSGDLGNTPAVARRSYVHPA
VVALVDRQESWRADLALPRSTQWMSRMERGLVALLETCDDIALDAVA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggccagccgcgcaaacgatattccgaaaaagccagccgacagcgccgggctgatcttc
gtcgacgattcgctgccgggaatcacgcgccgccgctgcggtcggggctggtcctatcgc
gatgctaaaggccgcagggtcgcggaccggaatgaaatcgaccggctgaacgccatcgcc
ttgccgcccgcctataccgatgcgtggttctgccccgcgcccaatggccacattcttgcc
accggcatcgatgccaaggggcgcaagcaatatcgctatcacccacgattccgtgcagag
cgggagtgcgagaagttcgaccggaccatcgcgttcggcaaggccctgccactgctgcgc
aagcgggtggaggccgacctgtcgacgcgcggactgaacaaggcccgcgccattgcctgc
gtcgtgcgcctgctcgaccttggccgcattcggatcggtaacgagacttacgccaagtcc
aacaagagctttggcgcgacgaccttgcgccagcgtcacgccaagctgtcgggccgccgc
ttgcggctgcgctataagggtaagtcgaacaagttgcgcgaggtaacgctgaccgatcgc
agcctgttgcgctttgtaaagcagatacaggacctgccggggcagcgccttttccagtat
ctcgacgacgagggcgagccgcacgcggtcgcatcgtgcgacgtcaacgcctatttgcgc
gaagttatgggcgaggatttcagcgccaaggatttccgtactttccacgccagcgtgctg
gccttcacggcgttggccgatgccgaggaaaaggtgacgatcaaggcgatgctggaactg
gtttccggcgaccttggcaatacgccggccgttgcgcggcgcagctatgtccacccggcc
gtcgtcgcgctggtcgatcggcaggaaagctggcgcgccgacctggctttgccgcgatcg
acgcagtggatgtcgcgcatggaacgcgggttggtcgcacttttggagacatgcgacgac
atcgcgctagatgcagtcgcctga
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