KEGG   Croceicoccus naphthovorans: AB433_12310
Entry
AB433_12310       CDS       T03964                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
cna  Croceicoccus naphthovorans
Brite
KEGG Orthology (KO) [BR:cna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cna03032]
    AB433_12310
   03400 DNA repair and recombination proteins [BR:cna03400]
    AB433_12310
Enzymes [BR:cna01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AB433_12310
DNA replication proteins [BR:cna03032]
 Prokaryotic type
  DNA Topoisomerases
   AB433_12310
DNA repair and recombination proteins [BR:cna03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AB433_12310
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AKM10567
UniProt: A0A0G3XHC5
LinkDB
Position
2441184..2442227
AA seq 347 aa
MASRANDIPKKPADSAGLIFVDDSLPGITRRRCGRGWSYRDAKGRRVADRNEIDRLNAIA
LPPAYTDAWFCPAPNGHILATGIDAKGRKQYRYHPRFRAERECEKFDRTIAFGKALPLLR
KRVEADLSTRGLNKARAIACVVRLLDLGRIRIGNETYAKSNKSFGATTLRQRHAKLSGRR
LRLRYKGKSNKLREVTLTDRSLLRFVKQIQDLPGQRLFQYLDDEGEPHAVASCDVNAYLR
EVMGEDFSAKDFRTFHASVLAFTALADAEEKVTIKAMLELVSGDLGNTPAVARRSYVHPA
VVALVDRQESWRADLALPRSTQWMSRMERGLVALLETCDDIALDAVA
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggccagccgcgcaaacgatattccgaaaaagccagccgacagcgccgggctgatcttc
gtcgacgattcgctgccgggaatcacgcgccgccgctgcggtcggggctggtcctatcgc
gatgctaaaggccgcagggtcgcggaccggaatgaaatcgaccggctgaacgccatcgcc
ttgccgcccgcctataccgatgcgtggttctgccccgcgcccaatggccacattcttgcc
accggcatcgatgccaaggggcgcaagcaatatcgctatcacccacgattccgtgcagag
cgggagtgcgagaagttcgaccggaccatcgcgttcggcaaggccctgccactgctgcgc
aagcgggtggaggccgacctgtcgacgcgcggactgaacaaggcccgcgccattgcctgc
gtcgtgcgcctgctcgaccttggccgcattcggatcggtaacgagacttacgccaagtcc
aacaagagctttggcgcgacgaccttgcgccagcgtcacgccaagctgtcgggccgccgc
ttgcggctgcgctataagggtaagtcgaacaagttgcgcgaggtaacgctgaccgatcgc
agcctgttgcgctttgtaaagcagatacaggacctgccggggcagcgccttttccagtat
ctcgacgacgagggcgagccgcacgcggtcgcatcgtgcgacgtcaacgcctatttgcgc
gaagttatgggcgaggatttcagcgccaaggatttccgtactttccacgccagcgtgctg
gccttcacggcgttggccgatgccgaggaaaaggtgacgatcaaggcgatgctggaactg
gtttccggcgaccttggcaatacgccggccgttgcgcggcgcagctatgtccacccggcc
gtcgtcgcgctggtcgatcggcaggaaagctggcgcgccgacctggctttgccgcgatcg
acgcagtggatgtcgcgcatggaacgcgggttggtcgcacttttggagacatgcgacgac
atcgcgctagatgcagtcgcctga

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