Croceicoccus naphthovorans: AB433_14535
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Entry
AB433_14535 CDS
T03964
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
cna
Croceicoccus naphthovorans
Pathway
cna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB433_14535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cna03021
]
AB433_14535
03400 DNA repair and recombination proteins [BR:
cna03400
]
AB433_14535
Enzymes [BR:
cna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB433_14535
Transcription machinery [BR:
cna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB433_14535
DNA repair and recombination proteins [BR:
cna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB433_14535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AKM10906
UniProt:
A0A0G3XJX5
LinkDB
All DBs
Position
2906132..2906476
Genome browser
AA seq
114 aa
AA seq
DB search
MARVTVEDCVDKVPNRFDLVLLAAQRAREISAGAELTVDRDRDKNPVVALREIAEETVAP
KNLKETLVQNLQKVAVDDDDEIDEIGSLSRSAEALRLTAAAPTRSTSIGGDYEG
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgttaccgttgaagattgcgtcgacaaggtcccgaaccgtttcgatctcgtc
ctgctggccgcccagcgtgcacgcgagatttccgccggtgccgaactgaccgtcgatcgc
gatcgtgacaagaacccggtcgtcgccctgcgcgagatcgcggaagagaccgtcgccccg
aaaaacctgaaggaaacgctggttcagaacctgcagaaggtcgccgtggacgacgatgac
gagatcgatgaaatcggctcgctgtcccgctcggcagaggctcttcgccttaccgccgcc
gcgccgacgcgcagcacatcgatcggcggagactacgagggctga
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