Croceicoccus naphthovorans: AB433_15395
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Entry
AB433_15395 CDS
T03964
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
cna
Croceicoccus naphthovorans
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cna03032
]
AB433_15395
03036 Chromosome and associated proteins [BR:
cna03036
]
AB433_15395
03400 DNA repair and recombination proteins [BR:
cna03400
]
AB433_15395
DNA replication proteins [BR:
cna03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AB433_15395
Chromosome and associated proteins [BR:
cna03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AB433_15395
DNA repair and recombination proteins [BR:
cna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AB433_15395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
AKM11038
UniProt:
A0A0G3XKW5
LinkDB
All DBs
Position
complement(3119428..3119703)
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AA seq
91 aa
AA seq
DB search
MTGNDLAETLAAAHGLTKTDARKYVDTVFAAIGDAAAKGNEVSLNGFGKFSTKKTPEREG
RNPATGEAMTIKAATKVSFKPAKALKDKVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgactggaaatgatctcgccgaaacccttgccgccgctcatggcctgaccaagaccgac
gccaggaaatatgtcgataccgtgttcgcggcgatcggcgacgccgccgccaagggcaac
gaggtgtccttgaatgggtttggcaagttctcgacaaagaagacgccggaacgtgagggc
cgcaaccccgccaccggcgaggcgatgacgatcaaggccgcgacgaaggtcagcttcaag
ccagccaaagcgctcaaagacaaagtgaacggctga
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